RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TRGV4A0A0C4DH28 118 aa6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 LINC00862A6NCI5 91 aa6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 FAM229AH3BQW9 127 aa6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 RS1O15537 224 aa6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 SNAI2O43623 268 aa6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 MED14OSP0DP75 135 aa6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 RPS20P60866 119 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 FHL2Q14192 279 aa6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 FAM74A4Q5TZK3 123 aa6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 FAM231DQ6ZW35 169 aa6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 ZFP82Q8N141 532 aa6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 SYT8Q8NBV8 401 aa6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 GTSF1Q8WW33 167 aa6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 VSIG2Q96IQ7 327 aa6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 C18orf15Q96N68 181 aa6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 APLNQ9ULZ1 77 aa6.86□□□□□ -1.31
TOPBP1-209ENST00000513818 LOC100131303A0A0U1RQF7 123 aa6.85□□□□□ -1.31
TOPBP1-209ENST00000513818 NXPH4O95158 308 aa6.85□□□□□ -1.31
TOPBP1-209ENST00000513818 NUDT3O95989 172 aa6.85□□□□□ -1.31
TOPBP1-209ENST00000513818 OR5AL1P0C617 328 aa6.85□□□□□ -1.31
TOPBP1-209ENST00000513818 SPANXN1Q5VSR9 72 aa6.85□□□□□ -1.31
TOPBP1-209ENST00000513818 LYZL1Q6UWQ5 148 aa6.85□□□□□ -1.31
TOPBP1-209ENST00000513818 SFRP2Q96HF1 295 aa6.85□□□□□ -1.31
TOPBP1-209ENST00000513818 NDUFAF3Q9BU61 184 aa6.85□□□□□ -1.31
TOPBP1-209ENST00000513818 SSBP4Q9BWG4 385 aaPredicted RBP6.85□□□□□ -1.31
TOPBP1-209ENST00000513818 MSRB1Q9NZV6 116 aa6.85□□□□□ -1.31
TOPBP1-209ENST00000513818 V9GYV3 84 aa6.85□□□□□ -1.31
TOPBP1-209ENST00000513818 DNAH10Q8IVF4 4471 aa6.85□□□□□ -1.31
TOPBP1-209ENST00000513818 A0A096LPF7 62 aa6.84□□□□□ -1.31
TOPBP1-209ENST00000513818 LOC100996750A0A140TA64 210 aa6.84□□□□□ -1.31
TOPBP1-209ENST00000513818 TMEM218A2RU14 115 aa6.84□□□□□ -1.31
TOPBP1-209ENST00000513818 XKRY2A2RUG3 117 aa6.84□□□□□ -1.31
TOPBP1-209ENST00000513818 F8W036 122 aa6.84□□□□□ -1.31
TOPBP1-209ENST00000513818 CTRLP40313 264 aa6.84□□□□□ -1.31
TOPBP1-209ENST00000513818 CRYBA4P53673 196 aa6.84□□□□□ -1.31
TOPBP1-209ENST00000513818 UQCC3Q6UW78 93 aa6.84□□□□□ -1.31
TOPBP1-209ENST00000513818 Q6ZSN1 163 aa6.84□□□□□ -1.31
TOPBP1-209ENST00000513818 OR10G8Q8NGN5 311 aa6.84□□□□□ -1.31
TOPBP1-209ENST00000513818 PTH2Q96A98 100 aa6.84□□□□□ -1.31
TOPBP1-209ENST00000513818 PGLYRP4Q96LB8 373 aa6.84□□□□□ -1.31
TOPBP1-209ENST00000513818 KRTAP4-6Q9BYQ5 205 aa6.84□□□□□ -1.31
TOPBP1-209ENST00000513818 OSTCQ9NRP0 149 aa6.84□□□□□ -1.31
TOPBP1-209ENST00000513818 A8MWV9 139 aa6.83□□□□□ -1.32
TOPBP1-209ENST00000513818 PAX4O43316 350 aa6.83□□□□□ -1.32
TOPBP1-209ENST00000513818 GATA1P15976 413 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-209ENST00000513818 PCP4P48539 62 aa6.83□□□□□ -1.32
TOPBP1-209ENST00000513818 PTTG1IPP53801 180 aa6.83□□□□□ -1.32
TOPBP1-209ENST00000513818 C14orf178Q8N769 122 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-209ENST00000513818 C15orf54Q8N8G6 183 aa6.83□□□□□ -1.32
TOPBP1-209ENST00000513818 PRO0255Q9UI72 69 aa6.83□□□□□ -1.32
TOPBP1-209ENST00000513818 HHLA3Q9XRX5 114 aa6.83□□□□□ -1.32
TOPBP1-209ENST00000513818 HIGD1CA8MV81 97 aa6.82□□□□□ -1.32
TOPBP1-209ENST00000513818 A8MWL6 223 aa6.82□□□□□ -1.32
TOPBP1-209ENST00000513818 LY6G6CO95867 125 aa6.82□□□□□ -1.32
TOPBP1-209ENST00000513818 CRYGDP07320 174 aa6.82□□□□□ -1.32
TOPBP1-209ENST00000513818 MGPP08493 103 aa6.82□□□□□ -1.32
TOPBP1-209ENST00000513818 P0DMU3 169 aa6.82□□□□□ -1.32
TOPBP1-209ENST00000513818 FAM231AP0DMU4 169 aa6.82□□□□□ -1.32
TOPBP1-209ENST00000513818 FAM231CP0DMU5 169 aa6.82□□□□□ -1.32
TOPBP1-209ENST00000513818 UFSP1Q6NVU6 142 aa6.82□□□□□ -1.32
TOPBP1-209ENST00000513818 SLC25A29Q8N8R3 303 aa6.82□□□□□ -1.32
TOPBP1-209ENST00000513818 TSKUQ8WUA8 353 aa6.82□□□□□ -1.32
TOPBP1-209ENST00000513818 LINC00476Q8WZB0 136 aa6.82□□□□□ -1.32
TOPBP1-209ENST00000513818 AP1S3Q96PC3 154 aa6.82□□□□□ -1.32
TOPBP1-209ENST00000513818 Q9UF83 564 aa6.82□□□□□ -1.32
TOPBP1-209ENST00000513818 A0A1W2PPQ1 181 aa6.81□□□□□ -1.32
TOPBP1-209ENST00000513818 NTF3P20783 257 aa6.81□□□□□ -1.32
TOPBP1-209ENST00000513818 FAM3BP58499 235 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-209ENST00000513818 CACNG7P62955 275 aa6.81□□□□□ -1.32
TOPBP1-209ENST00000513818 TWIST1Q15672 202 aa6.81□□□□□ -1.32
TOPBP1-209ENST00000513818 ZNF56Q15929 161 aa6.81□□□□□ -1.32
TOPBP1-209ENST00000513818 RNF212Q495C1 297 aa6.81□□□□□ -1.32
TOPBP1-209ENST00000513818 C15orf53Q8NAA6 179 aa6.81□□□□□ -1.32
TOPBP1-209ENST00000513818 FAM210BQ96KR6 192 aa6.81□□□□□ -1.32
TOPBP1-209ENST00000513818 DNAH17Q9UFH2 4485 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 LCE6AA0A183 80 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 GAGE12JA6NER3 117 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 F2Z2F3 143 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 K7EQD1 137 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 RHODO00212 210 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 EVI2AP22794 236 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 FOXA3P55318 350 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 KMT2AQ03164 3969 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 PNRC1Q12796 327 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 GAGE1Q13065 139 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 GAGE4Q13068 117 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 GAGE5Q13069 117 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 GAGE13Q4V321 117 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 PIK3CD-AS1Q5SR53 167 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 UBE2DNLQ8IWF7 75 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 SLC7A5P1Q8MH63 180 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 NUP35Q8NFH5 326 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 ICOSQ9Y6W8 199 aa6.8□□□□□ -1.32
TOPBP1-209ENST00000513818 TCTAP57738 103 aa6.79□□□□□ -1.32
TOPBP1-209ENST00000513818 RHOHQ15669 191 aa6.79□□□□□ -1.32
TOPBP1-209ENST00000513818 MAJINQ3KP22 176 aa6.79□□□□□ -1.32
TOPBP1-209ENST00000513818 ZFP2Q6ZN57 461 aa6.79□□□□□ -1.32
TOPBP1-209ENST00000513818 SEC11CQ9BY50 192 aa6.79□□□□□ -1.32
TOPBP1-209ENST00000513818 CNFNQ9BYD5 112 aa6.79□□□□□ -1.32
TOPBP1-209ENST00000513818 CTDSP1Q9GZU7 261 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms