RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 LTAP01374 205 aa4.91□□□□□ -1.62
HTT-212ENST00000513639 TPT1P13693 172 aaKnown RBP4.91□□□□□ -1.62
HTT-212ENST00000513639 CRIP1P50238 77 aa4.91□□□□□ -1.62
HTT-212ENST00000513639 ZNF345Q14585 488 aa4.91□□□□□ -1.62
HTT-212ENST00000513639 LAGE3Q14657 143 aa4.91□□□□□ -1.62
HTT-212ENST00000513639 Q86TA4 180 aa4.91□□□□□ -1.62
HTT-212ENST00000513639 ZC2HC1AQ96GY0 325 aa4.91□□□□□ -1.62
HTT-212ENST00000513639 KRTAP4-5Q9BYR2 181 aa4.91□□□□□ -1.62
HTT-212ENST00000513639 PARLQ9H300 379 aa4.91□□□□□ -1.62
HTT-212ENST00000513639 URGCP-MRPS24S4R325 110 aa4.91□□□□□ -1.62
HTT-212ENST00000513639 TRBV10-1A0A0K0K1A3 114 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 GAGE12JA6NER3 117 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 EPM2AB3EWF7 344 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 G3V3Q6 166 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 H3BVH4 76 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 M0R036 132 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 PAGE4O60829 102 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 SH2D1AO60880 128 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 PFDN1O60925 122 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 IGHV3-30P01768 117 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 IGHV3-33P01772 117 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 IGHV3-30-3P0DP02 117 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 IGHV3-30-5P0DP03 117 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 AKR1C3P42330 323 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 GAGE1Q13065 139 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 GAGE4Q13068 117 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 GAGE5Q13069 117 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 ELOBQ15370 118 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 GAGE13Q4V321 117 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 EIF5AL1Q6IS14 154 aaKnown RBP4.9□□□□□ -1.63
HTT-212ENST00000513639 UFSP1Q6NVU6 142 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 KCNIP4Q6PIL6 250 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 Q6ZSN1 163 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 TMUB2Q71RG4 321 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 ZFP82Q8N141 532 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.9□□□□□ -1.63
HTT-212ENST00000513639 SFRP2Q96HF1 295 aa4.9□□□□□ -1.63
HTT-212ENST00000513639 FAT1Q14517 4588 aa4.89□□□□□ -1.63
HTT-212ENST00000513639 IGLV5-52A0A0A0MRZ9 124 aa4.89□□□□□ -1.63
HTT-212ENST00000513639 GRIFINA4D1Z8 144 aa4.89□□□□□ -1.63
HTT-212ENST00000513639 LRCOL1A6NCL2 159 aa4.89□□□□□ -1.63
HTT-212ENST00000513639 TEX46H3BTG2 121 aa4.89□□□□□ -1.63
HTT-212ENST00000513639 M0R381 172 aa4.89□□□□□ -1.63
HTT-212ENST00000513639 RAB5CP51148 216 aa4.89□□□□□ -1.63
HTT-212ENST00000513639 RPL36AP83881 106 aaKnown RBP4.89□□□□□ -1.63
HTT-212ENST00000513639 BAGE2Q86Y30 109 aa4.89□□□□□ -1.63
HTT-212ENST00000513639 FAM213BQ8TBF2 198 aa4.89□□□□□ -1.63
HTT-212ENST00000513639 RPL36ALQ969Q0 106 aaKnown RBP4.89□□□□□ -1.63
HTT-212ENST00000513639 RMI2Q96E14 147 aa4.89□□□□□ -1.63
HTT-212ENST00000513639 ZNF471Q9BX82 626 aaPredicted RBP4.89□□□□□ -1.63
HTT-212ENST00000513639 SAMD10Q9BYL1 202 aa4.89□□□□□ -1.63
HTT-212ENST00000513639 JPT2Q9H910 190 aa4.89□□□□□ -1.63
HTT-212ENST00000513639 Q9HAA7 133 aa4.89□□□□□ -1.63
HTT-212ENST00000513639 TRBV7-3A0A075B6L6 115 aa4.88□□□□□ -1.63
HTT-212ENST00000513639 A0A087WWL8 130 aa4.88□□□□□ -1.63
HTT-212ENST00000513639 A0A087WX48 190 aa4.88□□□□□ -1.63
HTT-212ENST00000513639 TMSB15BA0A087X1C1 80 aa4.88□□□□□ -1.63
HTT-212ENST00000513639 BCL2L11O43521 198 aa4.88□□□□□ -1.63
HTT-212ENST00000513639 C1QBP02746 253 aa4.88□□□□□ -1.63
HTT-212ENST00000513639 CXCL1P09341 107 aa4.88□□□□□ -1.63
HTT-212ENST00000513639 XGP55808 180 aa4.88□□□□□ -1.63
HTT-212ENST00000513639 KRTAP10-1P60331 282 aa4.88□□□□□ -1.63
HTT-212ENST00000513639 RAB4BP61018 213 aa4.88□□□□□ -1.63
HTT-212ENST00000513639 FAM74A4Q5TZK3 123 aa4.88□□□□□ -1.63
HTT-212ENST00000513639 C14orf178Q8N769 122 aaPredicted RBP4.88□□□□□ -1.63
HTT-212ENST00000513639 Q8N814 137 aa4.88□□□□□ -1.63
HTT-212ENST00000513639 FRZBQ92765 325 aa4.88□□□□□ -1.63
HTT-212ENST00000513639 CHCHD7Q9BUK0 85 aa4.88□□□□□ -1.63
HTT-212ENST00000513639 MLST8Q9BVC4 326 aa4.88□□□□□ -1.63
HTT-212ENST00000513639 DMBT1Q9UGM3 2413 aaPredicted RBP4.88□□□□□ -1.63
HTT-212ENST00000513639 TRAV1-1A0A0B4J248 108 aa4.87□□□□□ -1.63
HTT-212ENST00000513639 TMEM262E9PQX1 116 aa4.87□□□□□ -1.63
HTT-212ENST00000513639 SMLR1H3BR10 107 aa4.87□□□□□ -1.63
HTT-212ENST00000513639 LINC00694P0DN24 101 aa4.87□□□□□ -1.63
HTT-212ENST00000513639 PKIAP61925 76 aa4.87□□□□□ -1.63
HTT-212ENST00000513639 Q0VG73 95 aa4.87□□□□□ -1.63
HTT-212ENST00000513639 SPANXN1Q5VSR9 72 aa4.87□□□□□ -1.63
HTT-212ENST00000513639 Q8N976 141 aa4.87□□□□□ -1.63
HTT-212ENST00000513639 DAZAP1Q96EP5 407 aaKnown RBP4.87□□□□□ -1.63
HTT-212ENST00000513639 TMEM70Q9BUB7 260 aa4.87□□□□□ -1.63
HTT-212ENST00000513639 A0A1B0GV50 99 aa4.86□□□□□ -1.63
HTT-212ENST00000513639 F5H697 171 aa4.86□□□□□ -1.63
HTT-212ENST00000513639 OR5AL1P0C617 328 aa4.86□□□□□ -1.63
HTT-212ENST00000513639 SMIM17P0DL12 118 aa4.86□□□□□ -1.63
HTT-212ENST00000513639 INAFM2P0DMQ5 153 aa4.86□□□□□ -1.63
HTT-212ENST00000513639 FUSP35637 526 aaKnown RBP eCLIP4.86□□□□□ -1.63
HTT-212ENST00000513639 TMEM97Q5BJF2 176 aa4.86□□□□□ -1.63
HTT-212ENST00000513639 DAZ4Q86SG3 579 aaKnown RBP4.86□□□□□ -1.63
HTT-212ENST00000513639 NIT1Q86X76 327 aa4.86□□□□□ -1.63
HTT-212ENST00000513639 OR10G8Q8NGN5 311 aa4.86□□□□□ -1.63
HTT-212ENST00000513639 MANBALQ9NQG1 85 aa4.86□□□□□ -1.63
HTT-212ENST00000513639 BIN3Q9NQY0 253 aa4.86□□□□□ -1.63
HTT-212ENST00000513639 DAZ3Q9NR90 486 aaKnown RBP4.86□□□□□ -1.63
HTT-212ENST00000513639 Q9UF83 564 aa4.86□□□□□ -1.63
HTT-212ENST00000513639 SCO2A0A1W2PP80 73 aa4.85□□□□□ -1.63
HTT-212ENST00000513639 XKRY2A2RUG3 117 aa4.85□□□□□ -1.63
HTT-212ENST00000513639 PDE6DO43924 150 aa4.85□□□□□ -1.63
HTT-212ENST00000513639 RPL35P42766 123 aaKnown RBP4.85□□□□□ -1.63
HTT-212ENST00000513639 RPS20P60866 119 aaKnown RBP4.85□□□□□ -1.63
HTT-212ENST00000513639 UBE2D3P61077 147 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms