RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 PNRC1Q12796 327 aaPredicted RBP14.65□□□□□ -0.06
NEIL3-202ENST00000513321 WDR73Q6P4I2 378 aa14.65□□□□□ -0.06
NEIL3-202ENST00000513321 Q6ZSN1 163 aa14.65□□□□□ -0.06
NEIL3-202ENST00000513321 ADCYAP1P18509 176 aa14.64□□□□□ -0.07
NEIL3-202ENST00000513321 NTF3P20783 257 aa14.64□□□□□ -0.07
NEIL3-202ENST00000513321 SLC25A29Q8N8R3 303 aa14.64□□□□□ -0.07
NEIL3-202ENST00000513321 PGLYRP4Q96LB8 373 aa14.64□□□□□ -0.07
NEIL3-202ENST00000513321 GFRA4Q9GZZ7 299 aa14.64□□□□□ -0.07
NEIL3-202ENST00000513321 TRBV6-4A0A1B0GX49 114 aa14.63□□□□□ -0.07
NEIL3-202ENST00000513321 FAM231BA6NCW3 169 aa14.63□□□□□ -0.07
NEIL3-202ENST00000513321 C14orf178Q8N769 122 aaPredicted RBP14.63□□□□□ -0.07
NEIL3-202ENST00000513321 CNFNQ9BYD5 112 aa14.63□□□□□ -0.07
NEIL3-202ENST00000513321 LGALS9CQ6DKI2 356 aa14.62□□□□□ -0.07
NEIL3-202ENST00000513321 LINC00476Q8WZB0 136 aa14.62□□□□□ -0.07
NEIL3-202ENST00000513321 SEC11CQ9BY50 192 aa14.62□□□□□ -0.07
NEIL3-202ENST00000513321 A0A096LPF7 62 aa14.61□□□□□ -0.07
NEIL3-202ENST00000513321 LCE6AA0A183 80 aa14.61□□□□□ -0.07
NEIL3-202ENST00000513321 HIGD1CA8MV81 97 aa14.61□□□□□ -0.07
NEIL3-202ENST00000513321 LY6G6CO95867 125 aa14.61□□□□□ -0.07
NEIL3-202ENST00000513321 GYPEP15421 78 aa14.61□□□□□ -0.07
NEIL3-202ENST00000513321 TWIST1Q15672 202 aa14.61□□□□□ -0.07
NEIL3-202ENST00000513321 AP1S3Q96PC3 154 aa14.61□□□□□ -0.07
NEIL3-202ENST00000513321 ICOSQ9Y6W8 199 aa14.61□□□□□ -0.07
NEIL3-202ENST00000513321 LOC100131303A0A0U1RQF7 123 aa14.61□□□□□ -0.07
NEIL3-202ENST00000513321 PRADC1Q9BSG0 188 aa14.61□□□□□ -0.07
NEIL3-202ENST00000513321 SMIM17P0DL12 118 aa14.6□□□□□ -0.07
NEIL3-202ENST00000513321 P0DMU3 169 aa14.6□□□□□ -0.07
NEIL3-202ENST00000513321 FAM231AP0DMU4 169 aa14.6□□□□□ -0.07
NEIL3-202ENST00000513321 FAM231CP0DMU5 169 aa14.6□□□□□ -0.07
NEIL3-202ENST00000513321 RHOHQ15669 191 aa14.6□□□□□ -0.07
NEIL3-202ENST00000513321 MRPL23Q16540 153 aaKnown RBP14.6□□□□□ -0.07
NEIL3-202ENST00000513321 KIF25-AS1Q9Y6Z4 181 aa14.6□□□□□ -0.07
NEIL3-202ENST00000513321 K7EQD1 137 aa14.59□□□□□ -0.07
NEIL3-202ENST00000513321 TRGC1P0CF51 173 aa14.59□□□□□ -0.07
NEIL3-202ENST00000513321 EVI2AP22794 236 aa14.59□□□□□ -0.07
NEIL3-202ENST00000513321 RNF212Q495C1 297 aa14.59□□□□□ -0.07
NEIL3-202ENST00000513321 SMIM27A0A1W2PRY6 76 aa14.58□□□□□ -0.08
NEIL3-202ENST00000513321 PPP1R2P9O14990 202 aa14.58□□□□□ -0.08
NEIL3-202ENST00000513321 MT-ND4LP03901 98 aa14.58□□□□□ -0.08
NEIL3-202ENST00000513321 LINC00315P59091 139 aa14.58□□□□□ -0.08
NEIL3-202ENST00000513321 NUP35Q8NFH5 326 aa14.58□□□□□ -0.08
NEIL3-202ENST00000513321 BORCS7Q96B45 105 aa14.58□□□□□ -0.08
NEIL3-202ENST00000513321 NAT8BQ9UHF3 227 aa14.58□□□□□ -0.08
NEIL3-202ENST00000513321 A0A1B0GUT8 65 aa14.57□□□□□ -0.08
NEIL3-202ENST00000513321 RAB4BP61018 213 aa14.57□□□□□ -0.08
NEIL3-202ENST00000513321 ZNF56Q15929 161 aa14.57□□□□□ -0.08
NEIL3-202ENST00000513321 F5H697 171 aa14.56□□□□□ -0.08
NEIL3-202ENST00000513321 SRIP30626 198 aa14.56□□□□□ -0.08
NEIL3-202ENST00000513321 C10orf91Q5T1B1 145 aa14.56□□□□□ -0.08
NEIL3-202ENST00000513321 Q9UF83 564 aa14.56□□□□□ -0.08
NEIL3-202ENST00000513321 CCL18P55774 89 aa14.56□□□□□ -0.08
NEIL3-202ENST00000513321 ESRGQ1W209 222 aa14.56□□□□□ -0.08
NEIL3-202ENST00000513321 NEGR1Q7Z3B1 354 aa14.56□□□□□ -0.08
NEIL3-202ENST00000513321 UBE2DNLQ8IWF7 75 aa14.56□□□□□ -0.08
NEIL3-202ENST00000513321 ANAPC16Q96DE5 110 aa14.56□□□□□ -0.08
NEIL3-202ENST00000513321 DPH3P1Q9H4G8 78 aa14.55□□□□□ -0.08
NEIL3-202ENST00000513321 MGPP08493 103 aa14.54□□□□□ -0.08
NEIL3-202ENST00000513321 SMIM15Q7Z3B0 74 aa14.53□□□□□ -0.08
NEIL3-202ENST00000513321 CARHSP1Q9Y2V2 147 aaKnown RBP14.53□□□□□ -0.08
NEIL3-202ENST00000513321 LINC00588Q9Y4M8 146 aa14.53□□□□□ -0.08
NEIL3-202ENST00000513321 KMT2CQ8NEZ4 4911 aaKnown RBP14.53□□□□□ -0.08
NEIL3-202ENST00000513321 ALMS1Q8TCU4 4167 aa14.52□□□□□ -0.08
NEIL3-202ENST00000513321 GAGE12JA6NER3 117 aa14.52□□□□□ -0.08
NEIL3-202ENST00000513321 GAGE1Q13065 139 aa14.52□□□□□ -0.08
NEIL3-202ENST00000513321 GAGE4Q13068 117 aa14.52□□□□□ -0.08
NEIL3-202ENST00000513321 GAGE5Q13069 117 aa14.52□□□□□ -0.08
NEIL3-202ENST00000513321 RIGQ13278 110 aa14.52□□□□□ -0.08
NEIL3-202ENST00000513321 GAGE13Q4V321 117 aa14.52□□□□□ -0.08
NEIL3-202ENST00000513321 SH2D6Q7Z4S9 175 aa14.52□□□□□ -0.08
NEIL3-202ENST00000513321 DNAH1Q9P2D7 4330 aa14.52□□□□□ -0.09
NEIL3-202ENST00000513321 LYPD5Q6UWN5 251 aa14.51□□□□□ -0.09
NEIL3-202ENST00000513321 TRBV10-1A0A0K0K1A3 114 aa14.51□□□□□ -0.09
NEIL3-202ENST00000513321 SUMO4Q6EEV6 95 aa14.5□□□□□ -0.09
NEIL3-202ENST00000513321 SLC7A5P1Q8MH63 180 aa14.5□□□□□ -0.09
NEIL3-202ENST00000513321 ZNRF2Q8NHG8 242 aa14.5□□□□□ -0.09
NEIL3-202ENST00000513321 VPS13DQ5THJ4 4388 aa14.49□□□□□ -0.09
NEIL3-202ENST00000513321 FAM3BP58499 235 aaPredicted RBP14.49□□□□□ -0.09
NEIL3-202ENST00000513321 ATP6V0E2Q8NHE4 81 aa14.49□□□□□ -0.09
NEIL3-202ENST00000513321 SACSQ9NZJ4 4579 aa14.49□□□□□ -0.09
NEIL3-202ENST00000513321 M0QY20 66 aa14.48□□□□□ -0.09
NEIL3-202ENST00000513321 LINC00694P0DN24 101 aa14.48□□□□□ -0.09
NEIL3-202ENST00000513321 RPL36AP83881 106 aaKnown RBP14.48□□□□□ -0.09
NEIL3-202ENST00000513321 RPL36ALQ969Q0 106 aaKnown RBP14.48□□□□□ -0.09
NEIL3-202ENST00000513321 CTDSP1Q9GZU7 261 aa14.48□□□□□ -0.09
NEIL3-202ENST00000513321 TMEM191AQ9H0A3 160 aa14.48□□□□□ -0.09
NEIL3-202ENST00000513321 H7C1H1 209 aa14.47□□□□□ -0.09
NEIL3-202ENST00000513321 NEXN-AS1Q8NBZ9 246 aa14.47□□□□□ -0.09
NEIL3-202ENST00000513321 CLRN3Q8NCR9 226 aa14.47□□□□□ -0.09
NEIL3-202ENST00000513321 LYSTQ99698 3801 aa14.47□□□□□ -0.09
NEIL3-202ENST00000513321 MRPS16Q9Y3D3 137 aaKnown RBP14.47□□□□□ -0.09
NEIL3-202ENST00000513321 TRBV7-3A0A075B6L6 115 aa14.46□□□□□ -0.09
NEIL3-202ENST00000513321 C7orf77A4D0Y5 90 aa14.46□□□□□ -0.09
NEIL3-202ENST00000513321 APOC3P02656 99 aa14.46□□□□□ -0.09
NEIL3-202ENST00000513321 CAMPP49913 170 aa14.46□□□□□ -0.09
NEIL3-202ENST00000513321 MRPL54Q6P161 138 aaKnown RBP14.46□□□□□ -0.09
NEIL3-202ENST00000513321 A0A1B0GW15 77 aa14.46□□□□□ -0.1
NEIL3-202ENST00000513321 NDUFA5Q16718 116 aa14.45□□□□□ -0.1
NEIL3-202ENST00000513321 RASL11AQ6T310 242 aa14.45□□□□□ -0.1
NEIL3-202ENST00000513321 GATD1Q8NB37 220 aa14.45□□□□□ -0.1
NEIL3-202ENST00000513321 GTSF1LQ9H1H1 148 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms