RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 NTF3P20783 257 aa7.18□□□□□ -1.26
PTPN20-227ENST00000513159 RNF212Q495C1 297 aa7.18□□□□□ -1.26
PTPN20-227ENST00000513159 C14orf178Q8N769 122 aaPredicted RBP7.18□□□□□ -1.26
PTPN20-227ENST00000513159 PGLYRP4Q96LB8 373 aa7.18□□□□□ -1.26
PTPN20-227ENST00000513159 TPPP3Q9BW30 176 aa7.18□□□□□ -1.26
PTPN20-227ENST00000513159 SEC11CQ9BY50 192 aa7.18□□□□□ -1.26
PTPN20-227ENST00000513159 PRO0255Q9UI72 69 aa7.18□□□□□ -1.26
PTPN20-227ENST00000513159 HHLA3Q9XRX5 114 aa7.18□□□□□ -1.26
PTPN20-227ENST00000513159 RYR3Q15413 4870 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 A0A096LPF7 62 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 TRGV4A0A0C4DH28 118 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 SMIM27A0A1W2PRY6 76 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 XKRY2A2RUG3 117 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 HIGD1CA8MV81 97 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 F2Z2F3 143 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 SPANXN1Q5VSR9 72 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 WDR73Q6P4I2 378 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 ZFP2Q6ZN57 461 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 SLC7A5P1Q8MH63 180 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 C15orf54Q8N8G6 183 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 SLC25A29Q8N8R3 303 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 SYT8Q8NBV8 401 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 NUP35Q8NFH5 326 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 GFRA4Q9GZZ7 299 aa7.17□□□□□ -1.26
PTPN20-227ENST00000513159 CARHSP1Q9Y2V2 147 aaKnown RBP7.17□□□□□ -1.26
PTPN20-227ENST00000513159 FAM231BA6NCW3 169 aa7.16□□□□□ -1.26
PTPN20-227ENST00000513159 H3BNG1 76 aa7.16□□□□□ -1.26
PTPN20-227ENST00000513159 PAX4O43316 350 aa7.16□□□□□ -1.26
PTPN20-227ENST00000513159 P0DMU3 169 aa7.16□□□□□ -1.26
PTPN20-227ENST00000513159 FAM231AP0DMU4 169 aa7.16□□□□□ -1.26
PTPN20-227ENST00000513159 FAM231CP0DMU5 169 aa7.16□□□□□ -1.26
PTPN20-227ENST00000513159 LINC00694P0DN24 101 aa7.16□□□□□ -1.26
PTPN20-227ENST00000513159 EVI2AP22794 236 aa7.16□□□□□ -1.26
PTPN20-227ENST00000513159 TCTAP57738 103 aa7.16□□□□□ -1.26
PTPN20-227ENST00000513159 CACNG7P62955 275 aa7.16□□□□□ -1.26
PTPN20-227ENST00000513159 PNRC1Q12796 327 aaPredicted RBP7.16□□□□□ -1.26
PTPN20-227ENST00000513159 FAM74A4Q5TZK3 123 aa7.16□□□□□ -1.26
PTPN20-227ENST00000513159 TRBV6-4A0A1B0GX49 114 aa7.15□□□□□ -1.26
PTPN20-227ENST00000513159 K7EQD1 137 aa7.15□□□□□ -1.26
PTPN20-227ENST00000513159 CIDEAO60543 219 aa7.15□□□□□ -1.26
PTPN20-227ENST00000513159 NUDT3O95989 172 aa7.15□□□□□ -1.26
PTPN20-227ENST00000513159 GYPEP15421 78 aa7.15□□□□□ -1.26
PTPN20-227ENST00000513159 C15orf53Q8NAA6 179 aa7.15□□□□□ -1.26
PTPN20-227ENST00000513159 LINC00476Q8WZB0 136 aa7.15□□□□□ -1.26
PTPN20-227ENST00000513159 DNAH10Q8IVF4 4471 aa7.14□□□□□ -1.27
PTPN20-227ENST00000513159 LCE6AA0A183 80 aa7.14□□□□□ -1.27
PTPN20-227ENST00000513159 SLAQ13239 276 aa7.14□□□□□ -1.27
PTPN20-227ENST00000513159 ESRGQ1W209 222 aa7.14□□□□□ -1.27
PTPN20-227ENST00000513159 C4orf48Q5BLP8 95 aa7.14□□□□□ -1.27
PTPN20-227ENST00000513159 LGALS9CQ6DKI2 356 aa7.14□□□□□ -1.27
PTPN20-227ENST00000513159 DNAH2Q9P225 4427 aa7.13□□□□□ -1.27
PTPN20-227ENST00000513159 A0A1B0GUT8 65 aa7.13□□□□□ -1.27
PTPN20-227ENST00000513159 RHODO00212 210 aa7.13□□□□□ -1.27
PTPN20-227ENST00000513159 GAS8-AS1O95177 125 aa7.13□□□□□ -1.27
PTPN20-227ENST00000513159 FAM3BP58499 235 aaPredicted RBP7.13□□□□□ -1.27
PTPN20-227ENST00000513159 TWIST1Q15672 202 aa7.13□□□□□ -1.27
PTPN20-227ENST00000513159 AP1S3Q96PC3 154 aa7.13□□□□□ -1.27
PTPN20-227ENST00000513159 NAT8BQ9UHF3 227 aa7.13□□□□□ -1.27
PTPN20-227ENST00000513159 LINC00588Q9Y4M8 146 aa7.13□□□□□ -1.27
PTPN20-227ENST00000513159 A0A1B0GXF2 115 aa7.12□□□□□ -1.27
PTPN20-227ENST00000513159 C7orf77A4D0Y5 90 aa7.12□□□□□ -1.27
PTPN20-227ENST00000513159 RAB4BP61018 213 aa7.12□□□□□ -1.27
PTPN20-227ENST00000513159 RHOHQ15669 191 aa7.12□□□□□ -1.27
PTPN20-227ENST00000513159 ANAPC16Q96DE5 110 aa7.12□□□□□ -1.27
PTPN20-227ENST00000513159 RNF185Q96GF1 192 aa7.12□□□□□ -1.27
PTPN20-227ENST00000513159 ICOSQ9Y6W8 199 aa7.12□□□□□ -1.27
PTPN20-227ENST00000513159 DNAH17Q9UFH2 4485 aa7.12□□□□□ -1.27
PTPN20-227ENST00000513159 M0QY20 66 aa7.11□□□□□ -1.27
PTPN20-227ENST00000513159 PPP1R2P9O14990 202 aa7.11□□□□□ -1.27
PTPN20-227ENST00000513159 MT-ND4LP03901 98 aa7.11□□□□□ -1.27
PTPN20-227ENST00000513159 TRGC1P0CF51 173 aa7.11□□□□□ -1.27
PTPN20-227ENST00000513159 ZNF56Q15929 161 aa7.11□□□□□ -1.27
PTPN20-227ENST00000513159 MRPL23Q16540 153 aaKnown RBP7.11□□□□□ -1.27
PTPN20-227ENST00000513159 SUMO4Q6EEV6 95 aa7.11□□□□□ -1.27
PTPN20-227ENST00000513159 LYPD5Q6UWN5 251 aa7.11□□□□□ -1.27
PTPN20-227ENST00000513159 NEXN-AS1Q8NBZ9 246 aa7.11□□□□□ -1.27
PTPN20-227ENST00000513159 CLRN3Q8NCR9 226 aa7.11□□□□□ -1.27
PTPN20-227ENST00000513159 DPH3P1Q9H4G8 78 aa7.11□□□□□ -1.27
PTPN20-227ENST00000513159 FRAS1Q86XX4 4008 aa7.1□□□□□ -1.27
PTPN20-227ENST00000513159 TRAV26-2A0A0B4J265 109 aa7.1□□□□□ -1.27
PTPN20-227ENST00000513159 GAGE12JA6NER3 117 aa7.1□□□□□ -1.27
PTPN20-227ENST00000513159 LY6G6CO95867 125 aa7.1□□□□□ -1.27
PTPN20-227ENST00000513159 APOC3P02656 99 aa7.1□□□□□ -1.27
PTPN20-227ENST00000513159 MGPP08493 103 aa7.1□□□□□ -1.27
PTPN20-227ENST00000513159 GAGE1Q13065 139 aa7.1□□□□□ -1.27
PTPN20-227ENST00000513159 GAGE4Q13068 117 aa7.1□□□□□ -1.27
PTPN20-227ENST00000513159 GAGE5Q13069 117 aa7.1□□□□□ -1.27
PTPN20-227ENST00000513159 GAGE13Q4V321 117 aa7.1□□□□□ -1.27
PTPN20-227ENST00000513159 MRPL54Q6P161 138 aaKnown RBP7.1□□□□□ -1.27
PTPN20-227ENST00000513159 ATRAIDQ6UW56 229 aa7.1□□□□□ -1.27
PTPN20-227ENST00000513159 NEGR1Q7Z3B1 354 aa7.1□□□□□ -1.27
PTPN20-227ENST00000513159 GATD1Q8NB37 220 aa7.1□□□□□ -1.27
PTPN20-227ENST00000513159 TMEM191AQ9H0A3 160 aa7.1□□□□□ -1.27
PTPN20-227ENST00000513159 F5H697 171 aa7.09□□□□□ -1.27
PTPN20-227ENST00000513159 RAB4AP20338 218 aa7.09□□□□□ -1.27
PTPN20-227ENST00000513159 SRIP30626 198 aa7.09□□□□□ -1.27
PTPN20-227ENST00000513159 UBE2D3P61077 147 aa7.09□□□□□ -1.27
PTPN20-227ENST00000513159 UBE2D2P62837 147 aa7.09□□□□□ -1.27
PTPN20-227ENST00000513159 RIGQ13278 110 aa7.09□□□□□ -1.27
PTPN20-227ENST00000513159 AMN1Q8IY45 258 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms