RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 GPX1P07203 203 aa5.05□□□□□ -1.6
RFC1-213ENST00000512275 LEPP41159 167 aa5.05□□□□□ -1.6
RFC1-213ENST00000512275 CRIP1P50238 77 aa5.05□□□□□ -1.6
RFC1-213ENST00000512275 CMC4P56277 68 aaPredicted RBP5.05□□□□□ -1.6
RFC1-213ENST00000512275 RPL19P84098 196 aaKnown RBP5.05□□□□□ -1.6
RFC1-213ENST00000512275 IBA57Q5T440 356 aaKnown RBP5.05□□□□□ -1.6
RFC1-213ENST00000512275 AMTNQ6UX39 209 aa5.05□□□□□ -1.6
RFC1-213ENST00000512275 CBLN2Q8IUK8 224 aa5.05□□□□□ -1.6
RFC1-213ENST00000512275 DEFB125Q8N687 156 aa5.05□□□□□ -1.6
RFC1-213ENST00000512275 C15orf54Q8N8G6 183 aa5.05□□□□□ -1.6
RFC1-213ENST00000512275 SMIM12Q96EX1 92 aa5.05□□□□□ -1.6
RFC1-213ENST00000512275 SFRP2Q96HF1 295 aa5.05□□□□□ -1.6
RFC1-213ENST00000512275 FAM19A4Q96LR4 140 aa5.05□□□□□ -1.6
RFC1-213ENST00000512275 CHCHD5Q9BSY4 110 aa5.05□□□□□ -1.6
RFC1-213ENST00000512275 NAGKQ9UJ70 344 aa5.05□□□□□ -1.6
RFC1-213ENST00000512275 CMYA5Q8N3K9 4069 aa5.05□□□□□ -1.6
RFC1-213ENST00000512275 TRAV12-3A0A0B4J271 114 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 C7orf71A4D174 169 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 C19orf71A6NCJ1 209 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 A8MTW9 85 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 ZNF705GA8MUZ8 300 aaPredicted RBP5.04□□□□□ -1.6
RFC1-213ENST00000512275 B4DEV8 164 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 P01737 135 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 GZMBP10144 247 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 CRISP2P16562 243 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 TSPOP30536 169 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 TCL1AP56279 114 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 FAM162BQ5T6X4 162 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 GFI1BQ5VTD9 330 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 FAM231DQ6ZW35 169 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 ODF3Q96PU9 254 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 RPP21Q9H633 154 aaKnown RBP5.04□□□□□ -1.6
RFC1-213ENST00000512275 JPT2Q9H910 190 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 BIN3Q9NQY0 253 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 OSTCQ9NRP0 149 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 LENEPQ9Y5L5 61 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 TRRAPQ9Y4A5 3859 aa5.04□□□□□ -1.6
RFC1-213ENST00000512275 TRBV7-9A0A0J9YWB2 115 aa5.03□□□□□ -1.6
RFC1-213ENST00000512275 NDUFAF8A1L188 74 aa5.03□□□□□ -1.6
RFC1-213ENST00000512275 KLLNB2CW77 178 aa5.03□□□□□ -1.6
RFC1-213ENST00000512275 PPP1R2P9O14990 202 aa5.03□□□□□ -1.6
RFC1-213ENST00000512275 ORM1P02763 201 aa5.03□□□□□ -1.6
RFC1-213ENST00000512275 PFN1P07737 140 aaKnown RBP5.03□□□□□ -1.6
RFC1-213ENST00000512275 RBMY1A1P0DJD3 496 aaKnown RBP5.03□□□□□ -1.6
RFC1-213ENST00000512275 RBMY1CP0DJD4 496 aa5.03□□□□□ -1.6
RFC1-213ENST00000512275 CDKN1BP46527 198 aa5.03□□□□□ -1.6
RFC1-213ENST00000512275 RBMY1FQ15415 496 aaKnown RBP5.03□□□□□ -1.6
RFC1-213ENST00000512275 OR2D3Q8NGH3 330 aa5.03□□□□□ -1.6
RFC1-213ENST00000512275 XCL2Q9UBD3 114 aa5.03□□□□□ -1.6
RFC1-213ENST00000512275 URGCP-MRPS24S4R325 110 aa5.03□□□□□ -1.6
RFC1-213ENST00000512275 V9GYV3 84 aa5.03□□□□□ -1.6
RFC1-213ENST00000512275 A0A087WWC5 75 aa5.02□□□□□ -1.61
RFC1-213ENST00000512275 TRAV21A0A0B4J279 112 aa5.02□□□□□ -1.61
RFC1-213ENST00000512275 GRIFINA4D1Z8 144 aa5.02□□□□□ -1.61
RFC1-213ENST00000512275 TMEM189A5PLL7 270 aa5.02□□□□□ -1.61
RFC1-213ENST00000512275 RPL37AP8A6NKH3 93 aa5.02□□□□□ -1.61
RFC1-213ENST00000512275 FABP5P3A8MUU1 101 aa5.02□□□□□ -1.61
RFC1-213ENST00000512275 H7C423 109 aa5.02□□□□□ -1.61
RFC1-213ENST00000512275 CRXO43186 299 aaPredicted RBP5.02□□□□□ -1.61
RFC1-213ENST00000512275 INSP01308 110 aa5.02□□□□□ -1.61
RFC1-213ENST00000512275 EGFEM1PQ0D2K5 195 aa5.02□□□□□ -1.61
RFC1-213ENST00000512275 Q6AWC8 147 aa5.02□□□□□ -1.61
RFC1-213ENST00000512275 Q8N377 158 aa5.02□□□□□ -1.61
RFC1-213ENST00000512275 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.02□□□□□ -1.61
RFC1-213ENST00000512275 NOTCH1P46531 2555 aa5.01□□□□□ -1.61
RFC1-213ENST00000512275 IGHV3OR16-12A0A075B7B8 117 aa5.01□□□□□ -1.61
RFC1-213ENST00000512275 TGIF2-C20orf24A0A0A6YYL0 155 aa5.01□□□□□ -1.61
RFC1-213ENST00000512275 IGKV3D-20A0A0C4DH25 116 aa5.01□□□□□ -1.61
RFC1-213ENST00000512275 SPINK4O60575 86 aa5.01□□□□□ -1.61
RFC1-213ENST00000512275 PRB2P02812 416 aaPredicted RBP5.01□□□□□ -1.61
RFC1-213ENST00000512275 TUBA4BQ9H853 241 aa5.01□□□□□ -1.61
RFC1-213ENST00000512275 SMCO4Q9NRQ5 59 aa5.01□□□□□ -1.61
RFC1-213ENST00000512275 IL36BQ9NZH7 164 aa5.01□□□□□ -1.61
RFC1-213ENST00000512275 TIMM8BQ9Y5J9 83 aaPredicted RBP5.01□□□□□ -1.61
RFC1-213ENST00000512275 LOC102724200A0A096LPH7 203 aaPredicted RBP5□□□□□ -1.61
RFC1-213ENST00000512275 MUC21A0A0G2JKD1 596 aa5□□□□□ -1.61
RFC1-213ENST00000512275 MUC21A0A140T8X8 626 aa5□□□□□ -1.61
RFC1-213ENST00000512275 SMIM27A0A1W2PRY6 76 aa5□□□□□ -1.61
RFC1-213ENST00000512275 A8MWL6 223 aa5□□□□□ -1.61
RFC1-213ENST00000512275 H3BVH4 76 aa5□□□□□ -1.61
RFC1-213ENST00000512275 ZNF324O75467 553 aaPredicted RBP5□□□□□ -1.61
RFC1-213ENST00000512275 PRM2P04554 102 aa5□□□□□ -1.61
RFC1-213ENST00000512275 TYMSP04818 313 aa5□□□□□ -1.61
RFC1-213ENST00000512275 GIG44P09565 113 aaPredicted RBP5□□□□□ -1.61
RFC1-213ENST00000512275 HTN1P15515 57 aa5□□□□□ -1.61
RFC1-213ENST00000512275 S100PP25815 95 aa5□□□□□ -1.61
RFC1-213ENST00000512275 NUTF2P61970 127 aaKnown RBP5□□□□□ -1.61
RFC1-213ENST00000512275 MORN3Q6PF18 240 aaPredicted RBP5□□□□□ -1.61
RFC1-213ENST00000512275 KCNIP4Q6PIL6 250 aa5□□□□□ -1.61
RFC1-213ENST00000512275 Q6ZTC4 211 aa5□□□□□ -1.61
RFC1-213ENST00000512275 TSKUQ8WUA8 353 aa5□□□□□ -1.61
RFC1-213ENST00000512275 GTSF1Q8WW33 167 aa5□□□□□ -1.61
RFC1-213ENST00000512275 PGLYRP4Q96LB8 373 aa5□□□□□ -1.61
RFC1-213ENST00000512275 TMEM208Q9BTX3 173 aa5□□□□□ -1.61
RFC1-213ENST00000512275 TMEM242Q9NWH2 141 aa5□□□□□ -1.61
RFC1-213ENST00000512275 TP53TG3Q9ULZ0 132 aa5□□□□□ -1.61
RFC1-213ENST00000512275 IGHV1OR15-1A0A075B7D0 117 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 XKRY2A2RUG3 117 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 HIGD1CA8MV81 97 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 GNRH2O43555 120 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms