RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 IQCJQ1A5X6 159 aa5.91□□□□□ -1.46
HTT-209ENST00000512068 MRAP2Q96G30 205 aa5.91□□□□□ -1.46
HTT-209ENST00000512068 C9orf85Q96MD7 179 aa5.91□□□□□ -1.46
HTT-209ENST00000512068 SPXQ9BT56 116 aa5.91□□□□□ -1.46
HTT-209ENST00000512068 CSTL1Q9H114 145 aa5.91□□□□□ -1.46
HTT-209ENST00000512068 MAP1LC3AQ9H492 121 aa5.91□□□□□ -1.46
HTT-209ENST00000512068 F5H697 171 aa5.9□□□□□ -1.46
HTT-209ENST00000512068 M0R2P5 195 aa5.9□□□□□ -1.46
HTT-209ENST00000512068 NXPH4O95158 308 aa5.9□□□□□ -1.46
HTT-209ENST00000512068 RBMY1A1P0DJD3 496 aaKnown RBP5.9□□□□□ -1.46
HTT-209ENST00000512068 RBMY1CP0DJD4 496 aa5.9□□□□□ -1.46
HTT-209ENST00000512068 RAB4AP20338 218 aa5.9□□□□□ -1.46
HTT-209ENST00000512068 PMCHP20382 165 aa5.9□□□□□ -1.46
HTT-209ENST00000512068 AMTP48728 403 aa5.9□□□□□ -1.46
HTT-209ENST00000512068 RBMY1FQ15415 496 aaKnown RBP5.9□□□□□ -1.46
HTT-209ENST00000512068 ZNF56Q15929 161 aa5.9□□□□□ -1.46
HTT-209ENST00000512068 ZNF876PQ49A33 203 aa5.9□□□□□ -1.46
HTT-209ENST00000512068 FAM74A4Q5TZK3 123 aa5.9□□□□□ -1.46
HTT-209ENST00000512068 C14orf178Q8N769 122 aaPredicted RBP5.9□□□□□ -1.46
HTT-209ENST00000512068 CHCHD1Q96BP2 118 aaKnown RBP5.9□□□□□ -1.46
HTT-209ENST00000512068 C16orf74Q96GX8 76 aa5.9□□□□□ -1.46
HTT-209ENST00000512068 PACRGQ96M98 296 aaPredicted RBP5.9□□□□□ -1.46
HTT-209ENST00000512068 MDFICQ9P1T7 246 aa5.9□□□□□ -1.46
HTT-209ENST00000512068 TEP1Q99973 2627 aaKnown RBP5.89□□□□□ -1.47
HTT-209ENST00000512068 LOC389332A0A1B0GUA5 103 aa5.89□□□□□ -1.47
HTT-209ENST00000512068 SMKR1H3BMG3 65 aa5.89□□□□□ -1.47
HTT-209ENST00000512068 NCR2O95944 276 aa5.89□□□□□ -1.47
HTT-209ENST00000512068 RRN3P1Q2M238 152 aa5.89□□□□□ -1.47
HTT-209ENST00000512068 ZNF575Q86XF7 245 aa5.89□□□□□ -1.47
HTT-209ENST00000512068 OR10D4PQ8NGN7 298 aa5.89□□□□□ -1.47
HTT-209ENST00000512068 TMEM263Q8WUH6 116 aaKnown RBP5.89□□□□□ -1.47
HTT-209ENST00000512068 RNF185Q96GF1 192 aa5.89□□□□□ -1.47
HTT-209ENST00000512068 U3KQK5 164 aa5.89□□□□□ -1.47
HTT-209ENST00000512068 MAST4O15021 2626 aa5.89□□□□□ -1.47
HTT-209ENST00000512068 ATRQ13535 2644 aa5.89□□□□□ -1.47
HTT-209ENST00000512068 A0A087WWL8 130 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 A8MWV9 139 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 H7C1H1 209 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 RHODO00212 210 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 SPRY2O43597 315 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 TNFRSF6BO95407 300 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 LINC00614P0C842 121 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 ESDP10768 282 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 PIK3CD-AS1Q5SR53 167 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 NIT1Q86X76 327 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 C1orf158Q8N1D5 194 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 SPATA3Q8NHX4 192 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 HIST1H2BLQ99880 126 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 NDUFAF3Q9BU61 184 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 NXT2Q9NPJ8 142 aaKnown RBP5.88□□□□□ -1.47
HTT-209ENST00000512068 GSN-AS1Q9NRJ2 163 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 MUC4Q99102 2169 aa5.88□□□□□ -1.47
HTT-209ENST00000512068 TRGV1A0A0A0MS02 117 aa5.87□□□□□ -1.47
HTT-209ENST00000512068 TRAV26-2A0A0B4J265 109 aa5.87□□□□□ -1.47
HTT-209ENST00000512068 KIR2DL5BA0A0G2JN68 375 aa5.87□□□□□ -1.47
HTT-209ENST00000512068 KIR2DL5BA0A0G2JPC4 375 aa5.87□□□□□ -1.47
HTT-209ENST00000512068 NPYP01303 97 aa5.87□□□□□ -1.47
HTT-209ENST00000512068 KIR2DL5AQ8N109 375 aa5.87□□□□□ -1.47
HTT-209ENST00000512068 KIR2DL5BQ8NHK3 375 aa5.87□□□□□ -1.47
HTT-209ENST00000512068 PTH2Q96A98 100 aa5.87□□□□□ -1.47
HTT-209ENST00000512068 NOTCH3Q9UM47 2321 aa5.86□□□□□ -1.47
HTT-209ENST00000512068 SMIM6P0DI80 62 aa5.86□□□□□ -1.47
HTT-209ENST00000512068 AZU1P20160 251 aa5.86□□□□□ -1.47
HTT-209ENST00000512068 IFI27P40305 119 aaPredicted RBP5.86□□□□□ -1.47
HTT-209ENST00000512068 C11orf72Q8NBR9 251 aa5.86□□□□□ -1.47
HTT-209ENST00000512068 ST20Q9HBF5 79 aa5.86□□□□□ -1.47
HTT-209ENST00000512068 MRPL16Q9NX20 251 aaKnown RBP5.86□□□□□ -1.47
HTT-209ENST00000512068 HSPB8Q9UJY1 196 aa5.86□□□□□ -1.47
HTT-209ENST00000512068 SMIM9A6NGZ8 99 aa5.85□□□□□ -1.47
HTT-209ENST00000512068 NUPR1O60356 82 aa5.85□□□□□ -1.47
HTT-209ENST00000512068 IGHV4-30-4P0DP06 118 aa5.85□□□□□ -1.47
HTT-209ENST00000512068 SUMO2P61956 95 aaKnown RBP5.85□□□□□ -1.47
HTT-209ENST00000512068 LGALS9BQ3B8N2 356 aa5.85□□□□□ -1.47
HTT-209ENST00000512068 SUMO4Q6EEV6 95 aa5.85□□□□□ -1.47
HTT-209ENST00000512068 ZNF705AQ6ZN79 300 aaPredicted RBP5.85□□□□□ -1.47
HTT-209ENST00000512068 FAM19A2Q8N3H0 131 aa5.85□□□□□ -1.47
HTT-209ENST00000512068 Q8N8P6 123 aa5.85□□□□□ -1.47
HTT-209ENST00000512068 OR4C5Q8NGB2 326 aa5.85□□□□□ -1.47
HTT-209ENST00000512068 RNASE8Q8TDE3 154 aaKnown RBP5.85□□□□□ -1.47
HTT-209ENST00000512068 WWC2-AS2Q96NR7 200 aa5.85□□□□□ -1.47
HTT-209ENST00000512068 C20orf78Q9BR46 151 aa5.85□□□□□ -1.47
HTT-209ENST00000512068 JPT2Q9H910 190 aa5.85□□□□□ -1.47
HTT-209ENST00000512068 NIPBLQ6KC79 2804 aaeCLIP5.84□□□□□ -1.47
HTT-209ENST00000512068 TRGV2A0A075B6R0 118 aa5.84□□□□□ -1.47
HTT-209ENST00000512068 C20orf202A1L168 122 aa5.84□□□□□ -1.47
HTT-209ENST00000512068 B5MCH6 92 aa5.84□□□□□ -1.47
HTT-209ENST00000512068 LEPROTL1O95214 131 aa5.84□□□□□ -1.47
HTT-209ENST00000512068 SCGB1D1O95968 90 aa5.84□□□□□ -1.47
HTT-209ENST00000512068 HBDP02042 147 aa5.84□□□□□ -1.47
HTT-209ENST00000512068 PRM2P04554 102 aa5.84□□□□□ -1.47
HTT-209ENST00000512068 GIG44P09565 113 aaPredicted RBP5.84□□□□□ -1.47
HTT-209ENST00000512068 GATA1P15976 413 aaPredicted RBP5.84□□□□□ -1.47
HTT-209ENST00000512068 G0S2P27469 103 aa5.84□□□□□ -1.47
HTT-209ENST00000512068 KRTDAPP60985 99 aa5.84□□□□□ -1.47
HTT-209ENST00000512068 DEFB135Q30KP9 77 aa5.84□□□□□ -1.47
HTT-209ENST00000512068 Q6ZSN1 163 aa5.84□□□□□ -1.47
HTT-209ENST00000512068 KIR2DL4Q99706 377 aa5.84□□□□□ -1.47
HTT-209ENST00000512068 SMIM2Q9BVW6 85 aa5.84□□□□□ -1.47
HTT-209ENST00000512068 NOP10Q9NPE3 64 aaKnown RBP5.84□□□□□ -1.47
HTT-209ENST00000512068 IGHV3-73A0A0B4J1V6 119 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms