RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ZC2HC1BQ5TFG8 222 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 RUSC1-AS1Q66K80 236 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 C11orf71Q6IPW1 123 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 SPATA12Q7Z6I5 190 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 ATP6V0E2Q8NHE4 81 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 TMEM14AQ9Y6G1 99 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 MED13LQ71F56 2210 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 IGHV4-61A0A0C4DH41 118 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 NDUFC2-KCTD14E9PQ53 114 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 NDUFB3O43676 98 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 IGHV4-59P01825 116 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 KIAA0087Q14695 138 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 TEN1Q86WV5 123 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 TMEM61Q8N0U2 210 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 C10orf105Q8TEF2 133 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 DSCR8Q96T75 97 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 VGLL1Q99990 258 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 HDHD3Q9BSH5 251 aaPredicted RBP3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 GNG13Q9P2W3 67 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 DKK2Q9UBU2 259 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 EPDR1Q9UM22 224 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 IGLV5-45A0A087WSX0 123 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 RBAKDNA6NC62 111 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 SDCBPO00560 298 aaPredicted RBP3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 ZNF737O75373 536 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 IGLV1-40P01703 118 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 Q6ZR03 302 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 SMR3AQ99954 134 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 SHANK2-AS3Q9BTD1 123 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 CLEC7AQ9BXN2 247 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 SCRT2Q9NQ03 307 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 SLC39A9Q9NUM3 307 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 ARFGEF3Q5TH69 2177 aa3.75□□□□□ -1.81
TRAPPC11-208ENST00000511955 IGLV3-9A0A075B6K5 115 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 IGHV4-30-2A0A087WSY4 118 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 A0A1W2PS18 150 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 FAM24AA6NFZ4 105 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 TSHBP01222 138 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 IGHV1-46P01743 117 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 IGHV3-13P01766 116 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 GYPAP02724 150 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 COL8A2P25067 703 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 NANOS3P60323 173 aaKnown RBP3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 UBE2G1P62253 170 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 LGALS9CQ6DKI2 356 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 NOTCH2NLQ7Z3S9 236 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 OR8B3Q8NGG8 313 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 TAF15Q92804 592 aaKnown RBP eCLIP3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 URB1-AS1Q96HZ7 61 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 OR8B2Q96RD0 313 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 IL36RNQ9UBH0 155 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 MXRA5Q9NR99 2828 aa3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 NSD1Q96L73 2696 aaPredicted RBP3.74□□□□□ -1.81
TRAPPC11-208ENST00000511955 LOC107986453A0A1B0GWG9 222 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 ZFP92A6NM28 416 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 EPM2AB3EWF7 344 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 EFNA4P52798 201 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 LINC00205P59089 165 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 ERVK-16P61578 105 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 ORMDL2Q53FV1 153 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 ZNF826PQ6ZT77 177 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 ZNF329Q86UD4 541 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 DEFB108BQ8NET1 73 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 ITLN1Q8WWA0 313 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 COPS9Q8WXC6 57 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 FAM168AQ92567 244 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 BPESC1Q9GZL8 116 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 SERP1Q9Y6X1 66 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 R4GMQ9 66 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 CUBNO60494 3623 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 RAI1Q7Z5J4 1906 aaPredicted RBP3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 JMJD1CQ15652 2540 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 TRBV27A0A0K0K1C4 114 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 CEBPZOSA8MTT3 80 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 F2Z2F3 143 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 SYS1-DBNDD2H3BUS1 97 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 MGST3O14880 152 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 CSN1S1P47710 185 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 EBI3Q14213 229 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 KRTAP27-1Q3LI81 207 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 PRELID3AQ96N28 172 aa3.73□□□□□ -1.81
TRAPPC11-208ENST00000511955 IQCF6A8MYZ5 107 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 RBP4P02753 201 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 WFDC2Q14508 124 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 TWIST1Q15672 202 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 ETDBQ3ZM63 59 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 C2orf91Q6ZV80 131 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 GPHB5Q86YW7 130 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 CHCHD5Q9BSY4 110 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 ARL2-SNX15V9GYD0 113 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 ABCA2Q9BZC7 2435 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 IGHV1OR15-1A0A075B7D0 117 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 IGHV3OR15-7A0A075B7D8 119 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 NXPH4O95158 308 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 TFF1P04155 84 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 ZNF20P17024 532 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 ASIPP42127 132 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 SYNJ2BPP57105 145 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 NPC2P61916 151 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 SUPT4H1P63272 117 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms