RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 KRTAP9-2Q9BYQ4 174 aa11.97□□□□□ -0.49
HMGCS1-206ENST00000511774 KIF25-AS1Q9Y6Z4 181 aa11.97□□□□□ -0.49
HMGCS1-206ENST00000511774 A0A0J9YXV3 536 aa11.96□□□□□ -0.49
HMGCS1-206ENST00000511774 CCDC160A6NGH7 325 aa11.96□□□□□ -0.49
HMGCS1-206ENST00000511774 ARL14EPLP0DKL9 152 aa11.96□□□□□ -0.49
HMGCS1-206ENST00000511774 HSD17B11Q8NBQ5 300 aa11.96□□□□□ -0.49
HMGCS1-206ENST00000511774 SMIM3Q9BZL3 60 aa11.96□□□□□ -0.49
HMGCS1-206ENST00000511774 DPH3P1Q9H4G8 78 aa11.96□□□□□ -0.49
HMGCS1-206ENST00000511774 WFDC1Q9HC57 220 aa11.96□□□□□ -0.49
HMGCS1-206ENST00000511774 MUC2Q02817 5179 aa11.95□□□□□ -0.5
HMGCS1-206ENST00000511774 SERTM2A0A1B0GWG4 89 aa11.95□□□□□ -0.5
HMGCS1-206ENST00000511774 CNBPP62633 177 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-206ENST00000511774 MIAQ16674 131 aa11.95□□□□□ -0.5
HMGCS1-206ENST00000511774 SFRP2Q96HF1 295 aa11.95□□□□□ -0.5
HMGCS1-206ENST00000511774 PRR34Q9NV39 138 aa11.95□□□□□ -0.5
HMGCS1-206ENST00000511774 PLAC8Q9NZF1 115 aa11.95□□□□□ -0.5
HMGCS1-206ENST00000511774 TRBV7-3A0A075B6L6 115 aa11.94□□□□□ -0.5
HMGCS1-206ENST00000511774 ARMS2P0C7Q2 107 aa11.94□□□□□ -0.5
HMGCS1-206ENST00000511774 ZFP69Q49AA0 526 aa11.94□□□□□ -0.5
HMGCS1-206ENST00000511774 HSPB11Q9Y547 144 aa11.94□□□□□ -0.5
HMGCS1-206ENST00000511774 TRAV34A0A0B4J273 112 aa11.93□□□□□ -0.5
HMGCS1-206ENST00000511774 TRBV10-1A0A0K0K1A3 114 aa11.93□□□□□ -0.5
HMGCS1-206ENST00000511774 RPL36AP83881 106 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-206ENST00000511774 SUN5Q8TC36 379 aa11.93□□□□□ -0.5
HMGCS1-206ENST00000511774 RPL36ALQ969Q0 106 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-206ENST00000511774 RNF185Q96GF1 192 aa11.93□□□□□ -0.5
HMGCS1-206ENST00000511774 EPDR1Q9UM22 224 aa11.93□□□□□ -0.5
HMGCS1-206ENST00000511774 A0A1W2PPV4 95 aa11.92□□□□□ -0.5
HMGCS1-206ENST00000511774 GRIFINA4D1Z8 144 aa11.92□□□□□ -0.5
HMGCS1-206ENST00000511774 B4DEV8 164 aa11.92□□□□□ -0.5
HMGCS1-206ENST00000511774 PTTG1O95997 202 aa11.92□□□□□ -0.5
HMGCS1-206ENST00000511774 CRIP1P50238 77 aa11.92□□□□□ -0.5
HMGCS1-206ENST00000511774 PRR3P79522 188 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-206ENST00000511774 DNLZQ5SXM8 178 aa11.92□□□□□ -0.5
HMGCS1-206ENST00000511774 WDR73Q6P4I2 378 aa11.92□□□□□ -0.5
HMGCS1-206ENST00000511774 NTM-AS1Q6ZSK4 140 aa11.92□□□□□ -0.5
HMGCS1-206ENST00000511774 OR10G8Q8NGN5 311 aa11.92□□□□□ -0.5
HMGCS1-206ENST00000511774 DPH3Q96FX2 82 aa11.92□□□□□ -0.5
HMGCS1-206ENST00000511774 KRBOX1C9JBD0 128 aa11.91□□□□□ -0.5
HMGCS1-206ENST00000511774 SUMO1P63165 101 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-206ENST00000511774 LINC00269Q8N2A0 174 aa11.91□□□□□ -0.5
HMGCS1-206ENST00000511774 NEXN-AS1Q8NBZ9 246 aa11.91□□□□□ -0.5
HMGCS1-206ENST00000511774 OR11H4Q8NGC9 324 aa11.91□□□□□ -0.5
HMGCS1-206ENST00000511774 SCGB1C1Q8TD33 95 aa11.91□□□□□ -0.5
HMGCS1-206ENST00000511774 IGHV3-64A0A075B6Q5 118 aa11.9□□□□□ -0.5
HMGCS1-206ENST00000511774 hDV102S1A0JD36 115 aa11.9□□□□□ -0.5
HMGCS1-206ENST00000511774 FABP5P3A8MUU1 101 aa11.9□□□□□ -0.5
HMGCS1-206ENST00000511774 K7EQM0 130 aa11.9□□□□□ -0.5
HMGCS1-206ENST00000511774 M0R036 132 aa11.9□□□□□ -0.5
HMGCS1-206ENST00000511774 STAG3L2P0CL84 134 aa11.9□□□□□ -0.5
HMGCS1-206ENST00000511774 STAG3L3P0CL85 134 aa11.9□□□□□ -0.5
HMGCS1-206ENST00000511774 CHCHD5Q9BSY4 110 aa11.9□□□□□ -0.5
HMGCS1-206ENST00000511774 ARL2-SNX15V9GYD0 113 aa11.9□□□□□ -0.5
HMGCS1-206ENST00000511774 IGLV10-54A0A075B6I4 117 aa11.89□□□□□ -0.51
HMGCS1-206ENST00000511774 MUC21A0A0G2JKD1 596 aa11.89□□□□□ -0.51
HMGCS1-206ENST00000511774 M0R381 172 aa11.89□□□□□ -0.51
HMGCS1-206ENST00000511774 GCHFRP30047 84 aa11.89□□□□□ -0.51
HMGCS1-206ENST00000511774 RBX1P62877 108 aa11.89□□□□□ -0.51
HMGCS1-206ENST00000511774 SAPCD1Q5SSQ6 148 aa11.89□□□□□ -0.51
HMGCS1-206ENST00000511774 CLRN3Q8NCR9 226 aa11.89□□□□□ -0.51
HMGCS1-206ENST00000511774 H2BFSP57053 126 aa11.88□□□□□ -0.51
HMGCS1-206ENST00000511774 GAGE6Q13070 117 aa11.87□□□□□ -0.51
HMGCS1-206ENST00000511774 C7orf33Q8WU49 177 aa11.87□□□□□ -0.51
HMGCS1-206ENST00000511774 PPP1R1CQ8WVI7 109 aa11.87□□□□□ -0.51
HMGCS1-206ENST00000511774 CDC34P49427 236 aaPredicted RBP11.86□□□□□ -0.51
HMGCS1-206ENST00000511774 PRR27Q6MZM9 219 aa11.86□□□□□ -0.51
HMGCS1-206ENST00000511774 RAB24Q969Q5 203 aa11.86□□□□□ -0.51
HMGCS1-206ENST00000511774 PHLDA3Q9Y5J5 127 aa11.86□□□□□ -0.51
HMGCS1-206ENST00000511774 SH2D1AO60880 128 aa11.85□□□□□ -0.51
HMGCS1-206ENST00000511774 RPL12P30050 165 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-206ENST00000511774 Q86TA4 180 aa11.85□□□□□ -0.51
HMGCS1-206ENST00000511774 GTSF1Q8WW33 167 aa11.85□□□□□ -0.51
HMGCS1-206ENST00000511774 TMSB15BA0A087X1C1 80 aa11.84□□□□□ -0.51
HMGCS1-206ENST00000511774 GFRA4Q9GZZ7 299 aa11.84□□□□□ -0.51
HMGCS1-206ENST00000511774 FAM240BA0A1B0GVZ2 78 aa11.83□□□□□ -0.52
HMGCS1-206ENST00000511774 MPC2O95563 127 aa11.83□□□□□ -0.52
HMGCS1-206ENST00000511774 TPT1P13693 172 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-206ENST00000511774 COX6A2Q02221 97 aa11.83□□□□□ -0.52
HMGCS1-206ENST00000511774 FAT4Q6V0I7 4981 aa11.83□□□□□ -0.52
HMGCS1-206ENST00000511774 RAB4BP61018 213 aa11.82□□□□□ -0.52
HMGCS1-206ENST00000511774 REG3AQ06141 175 aa11.82□□□□□ -0.52
HMGCS1-206ENST00000511774 ZFP82Q8N141 532 aa11.82□□□□□ -0.52
HMGCS1-206ENST00000511774 PRSS3P2Q8NHM4 247 aa11.82□□□□□ -0.52
HMGCS1-206ENST00000511774 LYPD6BQ8NI32 183 aa11.82□□□□□ -0.52
HMGCS1-206ENST00000511774 RAB5CP51148 216 aa11.81□□□□□ -0.52
HMGCS1-206ENST00000511774 SRSF9Q13242 221 aaKnown RBP eCLIP11.81□□□□□ -0.52
HMGCS1-206ENST00000511774 MAJINQ3KP22 176 aa11.81□□□□□ -0.52
HMGCS1-206ENST00000511774 C20orf203Q8NBC4 194 aa11.81□□□□□ -0.52
HMGCS1-206ENST00000511774 VAX2Q9UIW0 290 aa11.81□□□□□ -0.52
HMGCS1-206ENST00000511774 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-206ENST00000511774 IGKV2-24A0A0C4DH68 120 aa11.8□□□□□ -0.52
HMGCS1-206ENST00000511774 PKIAP61925 76 aa11.8□□□□□ -0.52
HMGCS1-206ENST00000511774 CYCSP99999 105 aaKnown RBP11.8□□□□□ -0.52
HMGCS1-206ENST00000511774 ZNF56Q15929 161 aa11.8□□□□□ -0.52
HMGCS1-206ENST00000511774 SPINK6Q6UWN8 80 aa11.8□□□□□ -0.52
HMGCS1-206ENST00000511774 C15orf56Q8N910 161 aa11.8□□□□□ -0.52
HMGCS1-206ENST00000511774 AP5S1Q9NUS5 200 aa11.8□□□□□ -0.52
HMGCS1-206ENST00000511774 LINC01559Q495D7 138 aa11.79□□□□□ -0.52
HMGCS1-206ENST00000511774 REG3GQ6UW15 175 aa11.79□□□□□ -0.52
HMGCS1-206ENST00000511774 COX8CQ7Z4L0 72 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms