RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 ODF3BA8MYP8 253 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 SPINK4O60575 86 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 LEPROTL1O95214 131 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 SLC35B1P78383 322 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 PSMG4Q5JS54 123 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 TEX36Q5VZQ5 186 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 WDR82Q6UXN9 313 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 C11orf53Q8IXP5 236 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 ATOH7Q8N100 152 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 ABHD12Q8N2K0 398 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 Q8N377 158 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 GATD1Q8NB37 220 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 FAM167A-AS1Q96KT0 104 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 SLC25A2Q9BXI2 301 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 RPP21Q9H633 154 aaKnown RBP3.78□□□□□ -1.8
GYPB-212ENST00000511198 MOB4Q9Y3A3 225 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 WASHC3Q9Y3C0 194 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 AMMECR1Q9Y4X0 333 aaPredicted RBP3.78□□□□□ -1.8
GYPB-212ENST00000511198 OR51B2Q9Y5P1 312 aa3.78□□□□□ -1.8
GYPB-212ENST00000511198 DNAH8Q96JB1 4490 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 IGHV3-43A0A0B4J1X8 118 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 TRAV3A0A0B4J244 114 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 TRBV6-1A0A0K0K1D8 114 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 A0A1B0GW15 77 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 A6NDN8 102 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 HIGD1CA8MV81 97 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 H3BRM9 83 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 UPK2O00526 184 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 COX7A2P2O60397 106 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 OXTP01178 125 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 IGLC1P0CG04 106 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 SMIM17P0DL12 118 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 IGHV3-43DP0DP04 118 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 RNASE2P10153 161 aaKnown RBP3.77□□□□□ -1.81
GYPB-212ENST00000511198 COX8AP10176 69 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 SCGB1A1P11684 91 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 GPR183P32249 361 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 RPL8P62917 257 aaKnown RBP3.77□□□□□ -1.81
GYPB-212ENST00000511198 PSG9Q00887 426 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 MAJINQ3KP22 176 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 MPV17L2Q567V2 206 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 GDF5OSQ5U4N7 250 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 LINC01545Q5VT33 79 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 UFSP1Q6NVU6 142 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 RBPMS2Q6ZRY4 209 aaKnown RBP3.77□□□□□ -1.81
GYPB-212ENST00000511198 BPIFA4PQ86YQ2 179 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 THAP8Q8NA92 274 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 OR5A1Q8NGJ0 315 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 OR4A5Q8NH83 315 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 FMC1Q96HJ9 113 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 NDFIP1Q9BT67 221 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 PAXXQ9BUH6 204 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 ZNF430Q9H8G1 570 aaPredicted RBP3.77□□□□□ -1.81
GYPB-212ENST00000511198 ZNF355PQ9NSJ1 428 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 CALYQ9NYX4 217 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 KLF12Q9Y4X4 402 aa3.77□□□□□ -1.81
GYPB-212ENST00000511198 MUC21A0A0G2JKD1 596 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 MUC21A0A140T8X8 626 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 C19orf71A6NCJ1 209 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 OR2T8A6NH00 312 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 SRRM4A7MD48 611 aaKnown RBP3.76□□□□□ -1.81
GYPB-212ENST00000511198 TMEM238C9JI98 176 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 K7EP34 96 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 CORTO00230 105 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 SIVA1O15304 175 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 IGHV1-8P0DP01 117 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 HTR1DP28221 377 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 PRDX2P32119 198 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 ERHP84090 104 aaKnown RBP3.76□□□□□ -1.81
GYPB-212ENST00000511198 ZNF415Q09FC8 603 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 HSD52Q0P140 79 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 RIGQ13278 110 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 EDDM3AQ14507 147 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 RPL39P5Q59GN2 51 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 MUC21Q5SSG8 566 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 C10orf113Q5VZT2 155 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 Q6AWC8 147 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 AMMECR1LQ6DCA0 310 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 Q6ZVH6 145 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 PDPNQ86YL7 162 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 CD177Q8N6Q3 437 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 C5orf17Q8NAS9 161 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 OR9G4Q8NGQ1 327 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 MYOZ3Q8TDC0 251 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 LRRC29Q8WV35 223 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 GPR82Q96P67 336 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 AP1S3Q96PC3 154 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 CLEC5AQ9NY25 188 aa3.76□□□□□ -1.81
GYPB-212ENST00000511198 IGKV1OR2-108A0A075B7D4 117 aa3.75□□□□□ -1.81
GYPB-212ENST00000511198 LOC102724200A0A096LPH7 203 aaPredicted RBP3.75□□□□□ -1.81
GYPB-212ENST00000511198 KBTBD11-OT1A0A1B0GTJ5 212 aa3.75□□□□□ -1.81
GYPB-212ENST00000511198 C7orf71A4D174 169 aa3.75□□□□□ -1.81
GYPB-212ENST00000511198 CHEK1O14757 476 aa3.75□□□□□ -1.81
GYPB-212ENST00000511198 CA1P00915 261 aaPredicted RBP3.75□□□□□ -1.81
GYPB-212ENST00000511198 LTAP01374 205 aa3.75□□□□□ -1.81
GYPB-212ENST00000511198 P01737 135 aa3.75□□□□□ -1.81
GYPB-212ENST00000511198 IGHG2P01859 326 aa3.75□□□□□ -1.81
GYPB-212ENST00000511198 APOA2P02652 100 aa3.75□□□□□ -1.81
GYPB-212ENST00000511198 CD7P09564 240 aa3.75□□□□□ -1.81
GYPB-212ENST00000511198 NBEAP1P0C6P0 100 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms