RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 CLUHP3Q96NS8 147 aa5.76□□□□□ -1.49
SMAD1-209ENST00000511125 LOC100131303A0A0U1RQF7 123 aa5.75□□□□□ -1.49
SMAD1-209ENST00000511125 MRPL51Q4U2R6 128 aaKnown RBP5.75□□□□□ -1.49
SMAD1-209ENST00000511125 Q8NAQ8 132 aa5.75□□□□□ -1.49
SMAD1-209ENST00000511125 SYT8Q8NBV8 401 aa5.75□□□□□ -1.49
SMAD1-209ENST00000511125 IGHV3-38A0A0C4DH36 116 aa5.75□□□□□ -1.49
SMAD1-209ENST00000511125 A0A1B0GXF2 115 aa5.75□□□□□ -1.49
SMAD1-209ENST00000511125 SNAI2O43623 268 aa5.75□□□□□ -1.49
SMAD1-209ENST00000511125 TRGC1P0CF51 173 aa5.75□□□□□ -1.49
SMAD1-209ENST00000511125 HUWE1Q7Z6Z7 4374 aaKnown RBP5.75□□□□□ -1.49
SMAD1-209ENST00000511125 F5H768 121 aa5.75□□□□□ -1.49
SMAD1-209ENST00000511125 NDUFA6P56556 154 aa5.75□□□□□ -1.49
SMAD1-209ENST00000511125 DAD1P61803 113 aa5.75□□□□□ -1.49
SMAD1-209ENST00000511125 AP1S3Q96PC3 154 aa5.75□□□□□ -1.49
SMAD1-209ENST00000511125 FBN3Q75N90 2809 aa5.74□□□□□ -1.49
SMAD1-209ENST00000511125 TRGV4A0A0C4DH28 118 aa5.74□□□□□ -1.49
SMAD1-209ENST00000511125 CRYGDP07320 174 aa5.74□□□□□ -1.49
SMAD1-209ENST00000511125 RAB4AP20338 218 aa5.74□□□□□ -1.49
SMAD1-209ENST00000511125 KPRPQ5T749 579 aaPredicted RBP5.74□□□□□ -1.49
SMAD1-209ENST00000511125 CFAP126Q5VTH2 177 aa5.74□□□□□ -1.49
SMAD1-209ENST00000511125 PHLDA1Q8WV24 401 aaPredicted RBP5.74□□□□□ -1.49
SMAD1-209ENST00000511125 C20orf144Q9BQM9 153 aa5.74□□□□□ -1.49
SMAD1-209ENST00000511125 SCRT2Q9NQ03 307 aa5.74□□□□□ -1.49
SMAD1-209ENST00000511125 FAM231BA6NCW3 169 aa5.74□□□□□ -1.49
SMAD1-209ENST00000511125 PMCHL1Q16048 86 aa5.74□□□□□ -1.49
SMAD1-209ENST00000511125 FAM104BQ5XKR9 115 aa5.74□□□□□ -1.49
SMAD1-209ENST00000511125 RNF185Q96GF1 192 aa5.74□□□□□ -1.49
SMAD1-209ENST00000511125 ZMAT4Q9H898 229 aa5.74□□□□□ -1.49
SMAD1-209ENST00000511125 C1orf196B1AJZ1 125 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 UBE2CO00762 179 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 DKK2Q9UBU2 259 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 NPYP01303 97 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 CACNG7P62955 275 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 KRTAP21-3Q3LHN1 58 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 SUMO4Q6EEV6 95 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 Q6ZTC4 211 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 GATD1Q8NB37 220 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 TENM2Q9NT68 2774 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 GAGE12JA6NER3 117 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 GAGE1Q13065 139 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 GAGE4Q13068 117 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 GAGE5Q13069 117 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 GAGE13Q4V321 117 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 SPATA25Q9BR10 227 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 GNB1LQ9BYB4 327 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 DPH3P1Q9H4G8 78 aa5.73□□□□□ -1.49
SMAD1-209ENST00000511125 DNAH9Q9NYC9 4486 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 HLA-DQA1P01909 254 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 WDR73Q6P4I2 378 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 ZNF493Q6ZR52 646 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 PRELID3AQ96N28 172 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 TMEM191AQ9H0A3 160 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 HIST1H2BKO60814 126 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 HIST1H2BJP06899 126 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 SPART-AS1P0CW21 52 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 MIFP14174 115 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 HOXA5P20719 270 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 HIST1H2BOP23527 126 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 HIST1H2BBP33778 126 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 HIST1H2BDP58876 126 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 HIST1H2BCP62807 126 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 HIST2H2BEQ16778 126 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.72□□□□□ -1.49
SMAD1-209ENST00000511125 ATP5L2Q7Z4Y8 100 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 BAGE3Q86Y29 109 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 HIST1H2BHQ93079 126 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 HIST1H2BNQ99877 126 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 HIST1H2BMQ99879 126 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 SPXQ9BT56 116 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 TCAPO15273 167 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 NUPR1O60356 82 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 RASL10AQ92737 203 aa5.72□□□□□ -1.49
SMAD1-209ENST00000511125 LINC00315P59091 139 aa5.71□□□□□ -1.5
SMAD1-209ENST00000511125 RNASEKQ6P5S7 137 aaKnown RBP5.71□□□□□ -1.5
SMAD1-209ENST00000511125 FAM19A2Q8N3H0 131 aa5.71□□□□□ -1.5
SMAD1-209ENST00000511125 SLC25A29Q8N8R3 303 aa5.71□□□□□ -1.5
SMAD1-209ENST00000511125 C11orf45Q8TAV5 145 aa5.71□□□□□ -1.5
SMAD1-209ENST00000511125 KIF25-AS1Q9Y6Z4 181 aa5.71□□□□□ -1.5
SMAD1-209ENST00000511125 A8MZ25 164 aa5.71□□□□□ -1.5
SMAD1-209ENST00000511125 IFI27P40305 119 aaPredicted RBP5.71□□□□□ -1.5
SMAD1-209ENST00000511125 DAZ2Q13117 558 aaKnown RBP5.71□□□□□ -1.5
SMAD1-209ENST00000511125 C12orf74Q32Q52 190 aa5.71□□□□□ -1.5
SMAD1-209ENST00000511125 ZNRF2Q8NHG8 242 aa5.71□□□□□ -1.5
SMAD1-209ENST00000511125 CNFNQ9BYD5 112 aa5.71□□□□□ -1.5
SMAD1-209ENST00000511125 TRAV26-1A0A087WT03 109 aa5.7□□□□□ -1.5
SMAD1-209ENST00000511125 TNFRSF6BO95407 300 aa5.7□□□□□ -1.5
SMAD1-209ENST00000511125 S100A8P05109 93 aa5.7□□□□□ -1.5
SMAD1-209ENST00000511125 S100A6P06703 90 aa5.7□□□□□ -1.5
SMAD1-209ENST00000511125 SNRPEP62304 92 aaKnown RBP5.7□□□□□ -1.5
SMAD1-209ENST00000511125 ORMDL3Q8N138 153 aa5.7□□□□□ -1.5
SMAD1-209ENST00000511125 PRSS3P2Q8NHM4 247 aa5.7□□□□□ -1.5
SMAD1-209ENST00000511125 TM2D3Q9BRN9 247 aa5.7□□□□□ -1.5
SMAD1-209ENST00000511125 ALKBH7Q9BT30 221 aaPredicted RBP5.7□□□□□ -1.5
SMAD1-209ENST00000511125 SMIM9A6NGZ8 99 aa5.7□□□□□ -1.5
SMAD1-209ENST00000511125 A8MWV9 139 aa5.7□□□□□ -1.5
SMAD1-209ENST00000511125 FABP4P15090 132 aa5.7□□□□□ -1.5
SMAD1-209ENST00000511125 RAB5BP61020 215 aa5.7□□□□□ -1.5
SMAD1-209ENST00000511125 OR10J3Q5JRS4 329 aa5.7□□□□□ -1.5
SMAD1-209ENST00000511125 TRAV9-1A0A075B6T8 112 aa5.7□□□□□ -1.5
SMAD1-209ENST00000511125 HHLA3Q9XRX5 114 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms