RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 C9orf62Q8N4C0 152 aa5.85□□□□□ -1.47
PDPN-209ENST00000510906 PCNPQ8WW12 178 aaKnown RBP5.85□□□□□ -1.47
PDPN-209ENST00000510906 C9orf85Q96MD7 179 aa5.85□□□□□ -1.47
PDPN-209ENST00000510906 MAP1LC3BQ9GZQ8 125 aa5.85□□□□□ -1.47
PDPN-209ENST00000510906 TNFRSF18Q9Y5U5 241 aa5.85□□□□□ -1.47
PDPN-209ENST00000510906 ARL2-SNX15V9GYD0 113 aa5.85□□□□□ -1.47
PDPN-209ENST00000510906 IGHV3-73A0A0B4J1V6 119 aa5.84□□□□□ -1.47
PDPN-209ENST00000510906 IGKV3D-20A0A0C4DH25 116 aa5.84□□□□□ -1.47
PDPN-209ENST00000510906 FBLL1A6NHQ2 334 aaKnown RBP5.84□□□□□ -1.47
PDPN-209ENST00000510906 PEX7O00628 323 aa5.84□□□□□ -1.47
PDPN-209ENST00000510906 RS1O15537 224 aa5.84□□□□□ -1.47
PDPN-209ENST00000510906 ORM1P02763 201 aa5.84□□□□□ -1.47
PDPN-209ENST00000510906 RNASE3P12724 160 aaKnown RBP5.84□□□□□ -1.47
PDPN-209ENST00000510906 GATA1P15976 413 aaPredicted RBP5.84□□□□□ -1.47
PDPN-209ENST00000510906 FHITP49789 147 aa5.84□□□□□ -1.47
PDPN-209ENST00000510906 SAPCD1Q5SSQ6 148 aa5.84□□□□□ -1.47
PDPN-209ENST00000510906 Q6ZRN7 208 aaPredicted RBP5.84□□□□□ -1.47
PDPN-209ENST00000510906 Q86TA4 180 aa5.84□□□□□ -1.47
PDPN-209ENST00000510906 WFDC10BQ8IUB3 73 aa5.84□□□□□ -1.47
PDPN-209ENST00000510906 DNAH5Q8TE73 4624 aa5.84□□□□□ -1.48
PDPN-209ENST00000510906 HMSDA8MTL9 139 aa5.83□□□□□ -1.48
PDPN-209ENST00000510906 PPT1P50897 306 aa5.83□□□□□ -1.48
PDPN-209ENST00000510906 ZNF506Q5JVG8 444 aa5.83□□□□□ -1.48
PDPN-209ENST00000510906 CFAP126Q5VTH2 177 aa5.83□□□□□ -1.48
PDPN-209ENST00000510906 KCNRGQ8N5I3 272 aa5.83□□□□□ -1.48
PDPN-209ENST00000510906 NHLRC2Q8NBF2 726 aa5.83□□□□□ -1.48
PDPN-209ENST00000510906 OR11H4Q8NGC9 324 aa5.83□□□□□ -1.48
PDPN-209ENST00000510906 HIST1H2BAQ96A08 127 aa5.83□□□□□ -1.48
PDPN-209ENST00000510906 TXNDC17Q9BRA2 123 aa5.83□□□□□ -1.48
PDPN-209ENST00000510906 APOBP04114 4563 aaKnown RBP5.83□□□□□ -1.48
PDPN-209ENST00000510906 SRRM2Q9UQ35 2752 aaKnown RBP5.82□□□□□ -1.48
PDPN-209ENST00000510906 FABP5P3A8MUU1 101 aa5.82□□□□□ -1.48
PDPN-209ENST00000510906 CRIP1P50238 77 aa5.82□□□□□ -1.48
PDPN-209ENST00000510906 ZNF345Q14585 488 aa5.82□□□□□ -1.48
PDPN-209ENST00000510906 SLC25A29Q8N8R3 303 aa5.82□□□□□ -1.48
PDPN-209ENST00000510906 ZC2HC1AQ96GY0 325 aa5.82□□□□□ -1.48
PDPN-209ENST00000510906 LY96Q9Y6Y9 160 aa5.82□□□□□ -1.48
PDPN-209ENST00000510906 KRTAP4-8A0A0G2JLE6 195 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 A0A1B0GV50 99 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 M0R036 132 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 VCYO14598 125 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 SH2D1AO60880 128 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 DNAH10OSP0CZ25 163 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 S100A4P26447 101 aaKnown RBP5.81□□□□□ -1.48
PDPN-209ENST00000510906 ASIPP42127 132 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 RHOHQ15669 191 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 LCE1DQ5T752 114 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 CST9LP1Q5W188 147 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 TEX261Q6UWH6 196 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 STOML3Q8TAV4 291 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 FAM213BQ8TBF2 198 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 PTH2Q96A98 100 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 PRADC1Q9BSG0 188 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 ZNF471Q9BX82 626 aaPredicted RBP5.81□□□□□ -1.48
PDPN-209ENST00000510906 NKX6-2Q9C056 277 aaPredicted RBP5.81□□□□□ -1.48
PDPN-209ENST00000510906 PARLQ9H300 379 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 JPT2Q9H910 190 aa5.81□□□□□ -1.48
PDPN-209ENST00000510906 DMBT1Q9UGM3 2413 aaPredicted RBP5.81□□□□□ -1.48
PDPN-209ENST00000510906 TRAV9-2A0A087WT02 112 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 TRBV6-4A0A1B0GX49 114 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 GRIFINA4D1Z8 144 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 B4DEV8 164 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 KRBOX1C9JBD0 128 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 H3BVH4 76 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 BCL2L11O43521 198 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 CIDEAO60543 219 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 SEC11BP0C7V7 166 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 EVI2AP22794 236 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 FUSP35637 526 aaKnown RBP eCLIP5.8□□□□□ -1.48
PDPN-209ENST00000510906 RAB14P61106 215 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 UBE2G1P62253 170 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 LGALSLQ3ZCW2 172 aaPredicted RBP5.8□□□□□ -1.48
PDPN-209ENST00000510906 LCE5AQ5TCM9 118 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 COX8CQ7Z4L0 72 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 SH2D6Q7Z4S9 175 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 SFT2D1Q8WV19 159 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 MBD3L1Q8WWY6 194 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 FMC1Q96HJ9 113 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 URB1-AS1Q96HZ7 61 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 ZFP30Q9Y2G7 519 aa5.8□□□□□ -1.48
PDPN-209ENST00000510906 TMSB15BA0A087X1C1 80 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 IGHV3-38A0A0C4DH36 116 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 A0A0D9SG52 128 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 IGLV5-39A0A0G2JS06 123 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 TRBV6-1A0A0K0K1D8 114 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 KANTRA0A1W2PQU2 76 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 UMAD1C9J7I0 102 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 CDK2AP2O75956 126 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 LTAP01374 205 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 CRYGDP07320 174 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 ARMS2P0C7Q2 107 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 MGST1P10620 155 aaKnown RBP5.79□□□□□ -1.48
PDPN-209ENST00000510906 AKR1C3P42330 323 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 FAM162BQ5T6X4 162 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 NFE4Q86UQ8 179 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 SLC7A5P1Q8MH63 180 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 TCEAL7Q9BRU2 100 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 SAMD10Q9BYL1 202 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 IL36BQ9NZH7 164 aa5.79□□□□□ -1.48
PDPN-209ENST00000510906 Q9UF83 564 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms