RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ZNF546Q86UE3 836 aa3.41□□□□□ -1.86
USP53-206ENST00000510737 BPIFA4PQ86YQ2 179 aa3.41□□□□□ -1.86
USP53-206ENST00000510737 MARCH1Q8TCQ1 289 aa3.41□□□□□ -1.86
USP53-206ENST00000510737 GPX8Q8TED1 209 aa3.41□□□□□ -1.86
USP53-206ENST00000510737 CHCHD7Q9BUK0 85 aa3.41□□□□□ -1.86
USP53-206ENST00000510737 TXNL4BQ9NX01 149 aaKnown RBP3.41□□□□□ -1.86
USP53-206ENST00000510737 NDUFB11Q9NX14 153 aa3.41□□□□□ -1.86
USP53-206ENST00000510737 CACFD1Q9UGQ2 172 aa3.41□□□□□ -1.86
USP53-206ENST00000510737 PAIP2BQ9ULR5 123 aaKnown RBP3.41□□□□□ -1.86
USP53-206ENST00000510737 IGLV1-50A0A075B6I6 118 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 IGKV2-40A0A087WW87 121 aaPredicted RBP3.4□□□□□ -1.87
USP53-206ENST00000510737 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.4□□□□□ -1.87
USP53-206ENST00000510737 C5orf51A6NDU8 294 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 TMEM262E9PQX1 116 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 CTDSPLO15194 276 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 NDUFS6O75380 124 aaKnown RBP3.4□□□□□ -1.87
USP53-206ENST00000510737 B3GALNT1O75752 331 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 CIB2O75838 187 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 TNFAIP8O95379 198 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 IGKV2D-40P01614 121 aaPredicted RBP3.4□□□□□ -1.87
USP53-206ENST00000510737 MGST1P10620 155 aaKnown RBP3.4□□□□□ -1.87
USP53-206ENST00000510737 IAPPP10997 89 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 CRYGAP11844 174 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 SDC2P34741 201 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 MXD1Q05195 221 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 ZNF266Q14584 549 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 SURF2Q15527 256 aaPredicted RBP3.4□□□□□ -1.87
USP53-206ENST00000510737 FAM159AQ6UWV7 190 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 C15orf54Q8N8G6 183 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 OR13C8Q8NGS7 320 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 S100A16Q96FQ6 103 aaKnown RBP3.4□□□□□ -1.87
USP53-206ENST00000510737 SCN3BQ9NY72 215 aa3.4□□□□□ -1.87
USP53-206ENST00000510737 A0A096LNI7 61 aa3.39□□□□□ -1.87
USP53-206ENST00000510737 FAM24AA6NFZ4 105 aa3.39□□□□□ -1.87
USP53-206ENST00000510737 CRPP02741 224 aa3.39□□□□□ -1.87
USP53-206ENST00000510737 AKR1C1Q04828 323 aa3.39□□□□□ -1.87
USP53-206ENST00000510737 SMCO1Q147U7 214 aa3.39□□□□□ -1.87
USP53-206ENST00000510737 MIAQ16674 131 aa3.39□□□□□ -1.87
USP53-206ENST00000510737 GUK1Q16774 197 aa3.39□□□□□ -1.87
USP53-206ENST00000510737 TMEM78Q5T7P6 136 aa3.39□□□□□ -1.87
USP53-206ENST00000510737 LYZL2Q7Z4W2 148 aa3.39□□□□□ -1.87
USP53-206ENST00000510737 EXOC3-AS1Q8N2X6 119 aa3.39□□□□□ -1.87
USP53-206ENST00000510737 OR2T35Q8NGX2 323 aa3.39□□□□□ -1.87
USP53-206ENST00000510737 ZFAND1Q8TCF1 268 aa3.39□□□□□ -1.87
USP53-206ENST00000510737 RAB2BQ8WUD1 216 aa3.39□□□□□ -1.87
USP53-206ENST00000510737 YIPF6Q96EC8 236 aa3.39□□□□□ -1.87
USP53-206ENST00000510737 NAA60Q9H7X0 242 aa3.39□□□□□ -1.87
USP53-206ENST00000510737 TRBV19A0A075B6N1 114 aa3.38□□□□□ -1.87
USP53-206ENST00000510737 ANGP03950 147 aaKnown RBP3.38□□□□□ -1.87
USP53-206ENST00000510737 TYMSP04818 313 aa3.38□□□□□ -1.87
USP53-206ENST00000510737 SELENOTP62341 195 aa3.38□□□□□ -1.87
USP53-206ENST00000510737 KRTAP19-2Q3LHN2 52 aa3.38□□□□□ -1.87
USP53-206ENST00000510737 MPV17L2Q567V2 206 aa3.38□□□□□ -1.87
USP53-206ENST00000510737 Q6AWC8 147 aa3.38□□□□□ -1.87
USP53-206ENST00000510737 Q6ZRG5 221 aa3.38□□□□□ -1.87
USP53-206ENST00000510737 S100A7AQ86SG5 101 aa3.38□□□□□ -1.87
USP53-206ENST00000510737 TERB2Q8NHR7 220 aa3.38□□□□□ -1.87
USP53-206ENST00000510737 NAGKQ9UJ70 344 aa3.38□□□□□ -1.87
USP53-206ENST00000510737 IGLV10-54A0A075B6I4 117 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 TRAV1-1A0A0B4J248 108 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 TRBV7-9A0A0J9YWB2 115 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 SMCO3A2RU48 225 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 K7EPK0 472 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 CD3DP04234 171 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 RPS10P46783 165 aaKnown RBP3.37□□□□□ -1.87
USP53-206ENST00000510737 FGF8P55075 233 aaPredicted RBP3.37□□□□□ -1.87
USP53-206ENST00000510737 SLC38A11Q08AI6 406 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 TPRXLQ17RH7 258 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 KCNIP4Q6PIL6 250 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 IZUMO2Q6UXV1 221 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 FER1L6-AS1Q8NA97 138 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 SUN5Q8TC36 379 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 DIRC1Q969H9 104 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 RETNLBQ9BQ08 111 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 PRELID1Q9Y255 219 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 TPRKBQ9Y3C4 175 aa3.37□□□□□ -1.87
USP53-206ENST00000510737 WRBO00258 174 aa3.36□□□□□ -1.87
USP53-206ENST00000510737 HIST1H1EP10412 219 aaKnown RBP3.36□□□□□ -1.87
USP53-206ENST00000510737 AKR1C4P17516 323 aa3.36□□□□□ -1.87
USP53-206ENST00000510737 C1orf137Q5JT78 98 aa3.36□□□□□ -1.87
USP53-206ENST00000510737 SPANXN5Q5MJ07 72 aa3.36□□□□□ -1.87
USP53-206ENST00000510737 C10orf113Q5VZT2 155 aa3.36□□□□□ -1.87
USP53-206ENST00000510737 CLPSL2Q6UWE3 100 aa3.36□□□□□ -1.87
USP53-206ENST00000510737 PET117Q6UWS5 81 aa3.36□□□□□ -1.87
USP53-206ENST00000510737 LINC00269Q8N2A0 174 aa3.36□□□□□ -1.87
USP53-206ENST00000510737 PACRGLQ8N7B6 248 aa3.36□□□□□ -1.87
USP53-206ENST00000510737 GPR132Q9UNW8 380 aa3.36□□□□□ -1.87
USP53-206ENST00000510737 A0A0B4J2A0 478 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 A0A1W2PNN7 141 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 H3BP45 60 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 GOSR2O14653 212 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 COX7A2P2O60397 106 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 IGLV7-43P04211 117 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 RAB5CP51148 216 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 ASB16-AS1Q495Z4 193 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 RNASE10Q5GAN6 216 aaKnown RBP3.35□□□□□ -1.87
USP53-206ENST00000510737 UBE2NLQ5JXB2 153 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 UFSP1Q6NVU6 142 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 ZFP2Q6ZN57 461 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 SNX29P2Q8IUI4 249 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms