RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 FLI1Q01543 452 aaPredicted RBP5.02□□□□□ -1.61
CCSER1-208ENST00000509109 LINC01556Q5JQF7 62 aa5.02□□□□□ -1.61
CCSER1-208ENST00000509109 OR10J3Q5JRS4 329 aa5.02□□□□□ -1.61
CCSER1-208ENST00000509109 SUN5Q8TC36 379 aa5.02□□□□□ -1.61
CCSER1-208ENST00000509109 NKX6-2Q9C056 277 aaPredicted RBP5.02□□□□□ -1.61
CCSER1-208ENST00000509109 PSG8Q9UQ74 426 aa5.02□□□□□ -1.61
CCSER1-208ENST00000509109 A0A1W2PRE2 83 aa5.01□□□□□ -1.61
CCSER1-208ENST00000509109 A8MWV9 139 aa5.01□□□□□ -1.61
CCSER1-208ENST00000509109 GGTLC3B5MD39 225 aa5.01□□□□□ -1.61
CCSER1-208ENST00000509109 GIPP09681 153 aaPredicted RBP5.01□□□□□ -1.61
CCSER1-208ENST00000509109 S100A4P26447 101 aaKnown RBP5.01□□□□□ -1.61
CCSER1-208ENST00000509109 LAGE3Q14657 143 aa5.01□□□□□ -1.61
CCSER1-208ENST00000509109 PIK3CD-AS1Q5SR53 167 aa5.01□□□□□ -1.61
CCSER1-208ENST00000509109 CFAP126Q5VTH2 177 aa5.01□□□□□ -1.61
CCSER1-208ENST00000509109 PRNTQ86SH4 94 aa5.01□□□□□ -1.61
CCSER1-208ENST00000509109 SLC25A29Q8N8R3 303 aa5.01□□□□□ -1.61
CCSER1-208ENST00000509109 FRZBQ92765 325 aa5.01□□□□□ -1.61
CCSER1-208ENST00000509109 PTH2Q96A98 100 aa5.01□□□□□ -1.61
CCSER1-208ENST00000509109 TVP23CQ96ET8 276 aa5.01□□□□□ -1.61
CCSER1-208ENST00000509109 EPDR1Q9UM22 224 aa5.01□□□□□ -1.61
CCSER1-208ENST00000509109 VPS13BQ7Z7G8 4022 aa5.01□□□□□ -1.61
CCSER1-208ENST00000509109 LOC100131303A0A0U1RQF7 123 aa5□□□□□ -1.61
CCSER1-208ENST00000509109 CTXND1A0A1B0GTU2 59 aa5□□□□□ -1.61
CCSER1-208ENST00000509109 RHODO00212 210 aa5□□□□□ -1.61
CCSER1-208ENST00000509109 RS1O15537 224 aa5□□□□□ -1.61
CCSER1-208ENST00000509109 IFNA7P01567 189 aa5□□□□□ -1.61
CCSER1-208ENST00000509109 ASIPP42127 132 aa5□□□□□ -1.61
CCSER1-208ENST00000509109 ZNF506Q5JVG8 444 aa5□□□□□ -1.61
CCSER1-208ENST00000509109 LELP1Q5T871 98 aa5□□□□□ -1.61
CCSER1-208ENST00000509109 ZFP2Q6ZN57 461 aa5□□□□□ -1.61
CCSER1-208ENST00000509109 HIST1H2BAQ96A08 127 aa5□□□□□ -1.61
CCSER1-208ENST00000509109 SGK494Q96LW2 274 aa5□□□□□ -1.61
CCSER1-208ENST00000509109 C9orf85Q96MD7 179 aa5□□□□□ -1.61
CCSER1-208ENST00000509109 TCEAL7Q9BRU2 100 aa5□□□□□ -1.61
CCSER1-208ENST00000509109 GTSF1LQ9H1H1 148 aa5□□□□□ -1.61
CCSER1-208ENST00000509109 A0A087WWC5 75 aa4.99□□□□□ -1.61
CCSER1-208ENST00000509109 FXYD6-FXYD2A0A087WZ82 144 aa4.99□□□□□ -1.61
CCSER1-208ENST00000509109 IGLV5-52A0A0A0MRZ9 124 aa4.99□□□□□ -1.61
CCSER1-208ENST00000509109 FABP5P3A8MUU1 101 aa4.99□□□□□ -1.61
CCSER1-208ENST00000509109 IBA57-AS1B1ANH7 110 aa4.99□□□□□ -1.61
CCSER1-208ENST00000509109 PEX7O00628 323 aa4.99□□□□□ -1.61
CCSER1-208ENST00000509109 IGLV2-11P01706 119 aa4.99□□□□□ -1.61
CCSER1-208ENST00000509109 SEC11BP0C7V7 166 aa4.99□□□□□ -1.61
CCSER1-208ENST00000509109 ZNF80P51504 273 aaPredicted RBP4.99□□□□□ -1.61
CCSER1-208ENST00000509109 AKR1C8PQ5T2L2 129 aa4.99□□□□□ -1.61
CCSER1-208ENST00000509109 Q86TA4 180 aa4.99□□□□□ -1.61
CCSER1-208ENST00000509109 ATP6V0E2Q8NHE4 81 aa4.99□□□□□ -1.61
CCSER1-208ENST00000509109 MYCBP2O75592 4640 aa4.99□□□□□ -1.61
CCSER1-208ENST00000509109 HERC1Q15751 4861 aa4.99□□□□□ -1.61
CCSER1-208ENST00000509109 IGHV3-73A0A0B4J1V6 119 aa4.98□□□□□ -1.61
CCSER1-208ENST00000509109 B4DEV8 164 aa4.98□□□□□ -1.61
CCSER1-208ENST00000509109 RNASE3P12724 160 aaKnown RBP4.98□□□□□ -1.61
CCSER1-208ENST00000509109 FGF8P55075 233 aaPredicted RBP4.98□□□□□ -1.61
CCSER1-208ENST00000509109 UBE2G1P62253 170 aa4.98□□□□□ -1.61
CCSER1-208ENST00000509109 LGALSLQ3ZCW2 172 aaPredicted RBP4.98□□□□□ -1.61
CCSER1-208ENST00000509109 RPL7L1Q6DKI1 246 aaKnown RBP4.98□□□□□ -1.61
CCSER1-208ENST00000509109 OR2T35Q8NGX2 323 aa4.98□□□□□ -1.61
CCSER1-208ENST00000509109 STOML3Q8TAV4 291 aa4.98□□□□□ -1.61
CCSER1-208ENST00000509109 FMC1Q96HJ9 113 aa4.98□□□□□ -1.61
CCSER1-208ENST00000509109 TMEM70Q9BUB7 260 aa4.98□□□□□ -1.61
CCSER1-208ENST00000509109 KRTAP2-2Q9BYT5 123 aa4.98□□□□□ -1.61
CCSER1-208ENST00000509109 Q9HAA7 133 aa4.98□□□□□ -1.61
CCSER1-208ENST00000509109 IL36BQ9NZH7 164 aa4.98□□□□□ -1.61
CCSER1-208ENST00000509109 URGCP-MRPS24S4R325 110 aa4.98□□□□□ -1.61
CCSER1-208ENST00000509109 ARL2-SNX15V9GYD0 113 aa4.98□□□□□ -1.61
CCSER1-208ENST00000509109 TRAV8-3A0A0A6YYJ7 113 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 MAP1LC3B2A6NCE7 125 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 RNF222A6NCQ9 220 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 IGHV3-30P01768 117 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 IGHV3-33P01772 117 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 IGHV3-30-3P0DP02 117 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 IGHV3-30-5P0DP03 117 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 UBE2G2P60604 165 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 FAM162BQ5T6X4 162 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 Q5VSD8 79 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 DPPA3Q6W0C5 159 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 Q8N814 137 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 OR11H4Q8NGC9 324 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 RMI2Q96E14 147 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 MAP1LC3BQ9GZQ8 125 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 PARLQ9H300 379 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 ZFP30Q9Y2G7 519 aa4.97□□□□□ -1.61
CCSER1-208ENST00000509109 FAT1Q14517 4588 aa4.96□□□□□ -1.62
CCSER1-208ENST00000509109 TRAV34A0A0B4J273 112 aa4.96□□□□□ -1.62
CCSER1-208ENST00000509109 IGKV3D-20A0A0C4DH25 116 aa4.96□□□□□ -1.62
CCSER1-208ENST00000509109 LRCOL1A6NCL2 159 aa4.96□□□□□ -1.62
CCSER1-208ENST00000509109 GAGE12JA6NER3 117 aa4.96□□□□□ -1.62
CCSER1-208ENST00000509109 FAM74A7A6NL05 159 aa4.96□□□□□ -1.62
CCSER1-208ENST00000509109 H3BVH4 76 aa4.96□□□□□ -1.62
CCSER1-208ENST00000509109 TPT1P13693 172 aaKnown RBP4.96□□□□□ -1.62
CCSER1-208ENST00000509109 FUSP35637 526 aaKnown RBP eCLIP4.96□□□□□ -1.62
CCSER1-208ENST00000509109 FHITP49789 147 aa4.96□□□□□ -1.62
CCSER1-208ENST00000509109 XGP55808 180 aa4.96□□□□□ -1.62
CCSER1-208ENST00000509109 KRTAP10-1P60331 282 aa4.96□□□□□ -1.62
CCSER1-208ENST00000509109 GAGE1Q13065 139 aa4.96□□□□□ -1.62
CCSER1-208ENST00000509109 GAGE4Q13068 117 aa4.96□□□□□ -1.62
CCSER1-208ENST00000509109 GAGE5Q13069 117 aa4.96□□□□□ -1.62
CCSER1-208ENST00000509109 ZNF726P1Q15940 193 aa4.96□□□□□ -1.62
CCSER1-208ENST00000509109 RGS21Q2M5E4 152 aa4.96□□□□□ -1.62
CCSER1-208ENST00000509109 DNLZQ5SXM8 178 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms