RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 LINC01619G3V211 115 aa8.63□□□□□ -1.03
PRPF40B-203ENST00000508736 GNRH2O43555 120 aa8.63□□□□□ -1.03
PRPF40B-203ENST00000508736 TRAV12-1A0A0B4J245 112 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 CBY3A6NI87 242 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 LINC01549A6NIU2 74 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 K7EQG2 157 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 CRLF1O75462 422 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 TCTAP57738 103 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 TCTEX1D4Q5JR98 221 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 PCP2Q8IVA1 136 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 POM121L12Q8N7R1 296 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 TOMM6Q96B49 74 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 HIGD1BQ9P298 99 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 HHLA3Q9XRX5 114 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 NIPBLQ6KC79 2804 aaeCLIP8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 RNASE1P07998 156 aaKnown RBP8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 ZNF688P0C7X2 276 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 ZC2HC1BQ5TFG8 222 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 ADAMTSL5Q6ZMM2 481 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 SCGB3A1Q96QR1 104 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 ESM1Q9NQ30 184 aa8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 MRPL35Q9NZE8 188 aaKnown RBP8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 FN1P02751 2386 aaKnown RBP8.62□□□□□ -1.03
PRPF40B-203ENST00000508736 H7C1H1 209 aa8.61□□□□□ -1.03
PRPF40B-203ENST00000508736 DUSP14O95147 198 aaKnown RBP8.61□□□□□ -1.03
PRPF40B-203ENST00000508736 CD7P09564 240 aa8.61□□□□□ -1.03
PRPF40B-203ENST00000508736 RPL32P62910 135 aaKnown RBP8.61□□□□□ -1.03
PRPF40B-203ENST00000508736 RPL39LQ96EH5 51 aaKnown RBP8.61□□□□□ -1.03
PRPF40B-203ENST00000508736 C16orf95Q9H693 158 aa8.61□□□□□ -1.03
PRPF40B-203ENST00000508736 PEMTQ9UBM1 199 aa8.61□□□□□ -1.03
PRPF40B-203ENST00000508736 TRAV2A0A0B4J234 112 aa8.6□□□□□ -1.03
PRPF40B-203ENST00000508736 TRAV12-3A0A0B4J271 114 aa8.6□□□□□ -1.03
PRPF40B-203ENST00000508736 A0A0J9YX75 114 aa8.6□□□□□ -1.03
PRPF40B-203ENST00000508736 F8VRH5 84 aa8.6□□□□□ -1.03
PRPF40B-203ENST00000508736 H3BRM9 83 aa8.6□□□□□ -1.03
PRPF40B-203ENST00000508736 SYT8Q8NBV8 401 aa8.6□□□□□ -1.03
PRPF40B-203ENST00000508736 OR11H1Q8NG94 326 aa8.6□□□□□ -1.03
PRPF40B-203ENST00000508736 SELENOKQ9Y6D0 94 aa8.6□□□□□ -1.03
PRPF40B-203ENST00000508736 GTSCR1Q86UQ5 136 aa8.6□□□□□ -1.03
PRPF40B-203ENST00000508736 MUC4Q99102 2169 aa8.59□□□□□ -1.03
PRPF40B-203ENST00000508736 CUBNO60494 3623 aa8.59□□□□□ -1.03
PRPF40B-203ENST00000508736 IGKV2D-26A0A0A0MRZ7 120 aa8.59□□□□□ -1.03
PRPF40B-203ENST00000508736 SPRY2O43597 315 aa8.59□□□□□ -1.03
PRPF40B-203ENST00000508736 SLURP1P55000 103 aa8.59□□□□□ -1.03
PRPF40B-203ENST00000508736 C18orf65Q6ZTR6 163 aa8.59□□□□□ -1.03
PRPF40B-203ENST00000508736 ZNF418Q8TF45 676 aaPredicted RBP8.59□□□□□ -1.03
PRPF40B-203ENST00000508736 CSTL1Q9H114 145 aa8.59□□□□□ -1.03
PRPF40B-203ENST00000508736 CHTOPQ9Y3Y2 248 aaKnown RBP8.59□□□□□ -1.03
PRPF40B-203ENST00000508736 CDKN1BP46527 198 aa8.58□□□□□ -1.04
PRPF40B-203ENST00000508736 HILS1P60008 231 aa8.58□□□□□ -1.04
PRPF40B-203ENST00000508736 DEFB136Q30KP8 78 aa8.58□□□□□ -1.04
PRPF40B-203ENST00000508736 AMMECR1LQ6DCA0 310 aa8.58□□□□□ -1.04
PRPF40B-203ENST00000508736 C2orf66Q6UXQ4 117 aa8.58□□□□□ -1.04
PRPF40B-203ENST00000508736 CHAC1Q9BUX1 264 aa8.58□□□□□ -1.04
PRPF40B-203ENST00000508736 KIF25-AS1Q9Y6Z4 181 aa8.58□□□□□ -1.04
PRPF40B-203ENST00000508736 C9orf118A6NHY6 69 aa8.57□□□□□ -1.04
PRPF40B-203ENST00000508736 FOXI2Q6ZQN5 318 aa8.57□□□□□ -1.04
PRPF40B-203ENST00000508736 ERASQ7Z444 233 aa8.57□□□□□ -1.04
PRPF40B-203ENST00000508736 KLHL30-AS1Q8NEE0 82 aa8.57□□□□□ -1.04
PRPF40B-203ENST00000508736 C9orf85Q96MD7 179 aa8.57□□□□□ -1.04
PRPF40B-203ENST00000508736 CYSLTR1Q9Y271 337 aa8.57□□□□□ -1.04
PRPF40B-203ENST00000508736 IGHV1OR15-1A0A075B7D0 117 aa8.57□□□□□ -1.04
PRPF40B-203ENST00000508736 IGHV3-16A0A0C4DH30 117 aa8.57□□□□□ -1.04
PRPF40B-203ENST00000508736 K7EP13 123 aa8.57□□□□□ -1.04
PRPF40B-203ENST00000508736 LINC00315P59091 139 aa8.57□□□□□ -1.04
PRPF40B-203ENST00000508736 FHL3Q13643 280 aa8.57□□□□□ -1.04
PRPF40B-203ENST00000508736 GTF2H5Q6ZYL4 71 aa8.57□□□□□ -1.04
PRPF40B-203ENST00000508736 NEXN-AS1Q8NBZ9 246 aa8.57□□□□□ -1.04
PRPF40B-203ENST00000508736 TRBV25-1A0A075B6N4 114 aa8.56□□□□□ -1.04
PRPF40B-203ENST00000508736 F5H697 171 aa8.56□□□□□ -1.04
PRPF40B-203ENST00000508736 VCYO14598 125 aa8.56□□□□□ -1.04
PRPF40B-203ENST00000508736 KHDC1LQ5JSQ8 128 aa8.56□□□□□ -1.04
PRPF40B-203ENST00000508736 SUMO4Q6EEV6 95 aa8.56□□□□□ -1.04
PRPF40B-203ENST00000508736 KIR2DL4Q99706 377 aa8.56□□□□□ -1.04
PRPF40B-203ENST00000508736 TRGV11A0A075B6L2 103 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 TRAV8-6A0A0B4J262 113 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 OR11H12B2RN74 326 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 IGKV3-20P01619 116 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 GCSHP23434 173 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 TAL2Q16559 108 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 OR11H2Q8NH07 326 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 LINC01006Q8NI28 216 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 BAALCQ8WXS3 180 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 DLX4Q92988 240 aaPredicted RBP8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 JMJD8Q96S16 334 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 NF1P21359 2839 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 TRAV12-2A0A075B6T6 113 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 TRBV6-5A0A0K0K1A5 114 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 NDUFA7O95182 113 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 SMIM13P0DJ93 91 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 SPINK13Q1W4C9 94 aa8.55□□□□□ -1.04
PRPF40B-203ENST00000508736 A0A087WWL8 130 aa8.54□□□□□ -1.04
PRPF40B-203ENST00000508736 GAGE10A6NGK3 116 aa8.54□□□□□ -1.04
PRPF40B-203ENST00000508736 A8MTW9 85 aa8.54□□□□□ -1.04
PRPF40B-203ENST00000508736 POLR2KP53803 58 aaKnown RBP8.54□□□□□ -1.04
PRPF40B-203ENST00000508736 PAPPA-AS1Q5QFB9 102 aa8.54□□□□□ -1.04
PRPF40B-203ENST00000508736 Q8N1Y9 231 aa8.54□□□□□ -1.04
PRPF40B-203ENST00000508736 TMEM141Q96I45 108 aa8.54□□□□□ -1.04
PRPF40B-203ENST00000508736 CBY1Q9Y3M2 126 aa8.54□□□□□ -1.04
PRPF40B-203ENST00000508736 TSSC4Q9Y5U2 329 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms