RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 DLX4Q92988 240 aaPredicted RBP9.75□□□□□ -0.85
CAST-223ENST00000508608 PLEKHB2Q96CS7 222 aa9.75□□□□□ -0.85
CAST-223ENST00000508608 PRO0461Q9UI25 63 aa9.75□□□□□ -0.85
CAST-223ENST00000508608 A0A087WWL8 130 aa9.75□□□□□ -0.85
CAST-223ENST00000508608 C9orf85Q96MD7 179 aa9.75□□□□□ -0.85
CAST-223ENST00000508608 SNRPD3P62318 126 aaKnown RBP9.74□□□□□ -0.85
CAST-223ENST00000508608 Q6ZS46 218 aa9.74□□□□□ -0.85
CAST-223ENST00000508608 SIGMAR1Q99720 223 aa9.74□□□□□ -0.85
CAST-223ENST00000508608 JPT2Q9H910 190 aa9.74□□□□□ -0.85
CAST-223ENST00000508608 RPL39P62891 51 aaKnown RBP9.74□□□□□ -0.85
CAST-223ENST00000508608 TSSC4Q9Y5U2 329 aaPredicted RBP9.74□□□□□ -0.85
CAST-223ENST00000508608 IGHV3-16A0A0C4DH30 117 aa9.73□□□□□ -0.85
CAST-223ENST00000508608 A0A0J9YY99 117 aa9.73□□□□□ -0.85
CAST-223ENST00000508608 GAGE12HA6NDE8 117 aa9.73□□□□□ -0.85
CAST-223ENST00000508608 ATP5J2P56134 94 aa9.73□□□□□ -0.85
CAST-223ENST00000508608 RHOHQ15669 191 aa9.73□□□□□ -0.85
CAST-223ENST00000508608 ZNF876PQ49A33 203 aa9.73□□□□□ -0.85
CAST-223ENST00000508608 SH2D6Q7Z4S9 175 aa9.73□□□□□ -0.85
CAST-223ENST00000508608 KLHL30-AS1Q8NEE0 82 aa9.73□□□□□ -0.85
CAST-223ENST00000508608 TMEM89A2RUT3 159 aa9.73□□□□□ -0.85
CAST-223ENST00000508608 PSMB8P28062 276 aa9.73□□□□□ -0.85
CAST-223ENST00000508608 NSUN5P1Q3KNT7 163 aa9.73□□□□□ -0.85
CAST-223ENST00000508608 TMEM170BQ5T4T1 132 aa9.73□□□□□ -0.85
CAST-223ENST00000508608 FAM74A4Q5TZK3 123 aa9.73□□□□□ -0.85
CAST-223ENST00000508608 ATP6V0E2Q8NHE4 81 aa9.73□□□□□ -0.85
CAST-223ENST00000508608 SPATA25Q9BR10 227 aa9.73□□□□□ -0.85
CAST-223ENST00000508608 TSPAN13O95857 204 aa9.72□□□□□ -0.85
CAST-223ENST00000508608 EMP1P54849 157 aa9.72□□□□□ -0.85
CAST-223ENST00000508608 ZNF56Q15929 161 aa9.72□□□□□ -0.85
CAST-223ENST00000508608 TRPT1Q86TN4 253 aaKnown RBP9.72□□□□□ -0.85
CAST-223ENST00000508608 SPAG8Q99932 426 aaPredicted RBP9.72□□□□□ -0.85
CAST-223ENST00000508608 PRORYQ9H606 182 aa9.72□□□□□ -0.85
CAST-223ENST00000508608 IGHV4-30-2A0A087WSY4 118 aa9.72□□□□□ -0.85
CAST-223ENST00000508608 A0A0J9YX75 114 aa9.72□□□□□ -0.85
CAST-223ENST00000508608 ZNF688P0C7X2 276 aa9.72□□□□□ -0.85
CAST-223ENST00000508608 EDN2P20800 178 aa9.72□□□□□ -0.85
CAST-223ENST00000508608 SPTAN1Q13813 2472 aaKnown RBP9.71□□□□□ -0.85
CAST-223ENST00000508608 B4DSR2 109 aa9.71□□□□□ -0.85
CAST-223ENST00000508608 APOMO95445 188 aa9.71□□□□□ -0.85
CAST-223ENST00000508608 AZU1P20160 251 aa9.71□□□□□ -0.85
CAST-223ENST00000508608 GATA3P23771 443 aa9.71□□□□□ -0.85
CAST-223ENST00000508608 WFDC12Q8WWY7 111 aa9.71□□□□□ -0.85
CAST-223ENST00000508608 IGHV1OR15-1A0A075B7D0 117 aa9.71□□□□□ -0.86
CAST-223ENST00000508608 LOC107984156A0A0G2JMH3 177 aa9.71□□□□□ -0.86
CAST-223ENST00000508608 M0QY20 66 aa9.71□□□□□ -0.86
CAST-223ENST00000508608 LGALS3P17931 250 aaKnown RBP9.71□□□□□ -0.86
CAST-223ENST00000508608 UBE2D3P61077 147 aa9.71□□□□□ -0.86
CAST-223ENST00000508608 UBE2D2P62837 147 aa9.71□□□□□ -0.86
CAST-223ENST00000508608 CFAP126Q5VTH2 177 aa9.71□□□□□ -0.86
CAST-223ENST00000508608 NFE4Q86UQ8 179 aa9.71□□□□□ -0.86
CAST-223ENST00000508608 NDUFA11Q86Y39 141 aa9.71□□□□□ -0.86
CAST-223ENST00000508608 ARL17AQ8IVW1 177 aa9.71□□□□□ -0.86
CAST-223ENST00000508608 SLC25A29Q8N8R3 303 aa9.71□□□□□ -0.86
CAST-223ENST00000508608 ZNF256Q9Y2P7 627 aaPredicted RBP9.71□□□□□ -0.86
CAST-223ENST00000508608 J3QQQ9 107 aa9.7□□□□□ -0.86
CAST-223ENST00000508608 MTURNQ8N3F0 131 aa9.7□□□□□ -0.86
CAST-223ENST00000508608 ZNRF2Q8NHG8 242 aa9.7□□□□□ -0.86
CAST-223ENST00000508608 C1QTNF4Q9BXJ3 329 aa9.7□□□□□ -0.86
CAST-223ENST00000508608 GTSF1LQ9H1H1 148 aa9.7□□□□□ -0.86
CAST-223ENST00000508608 K7EQG2 157 aa9.7□□□□□ -0.86
CAST-223ENST00000508608 Q8N1Y9 231 aa9.7□□□□□ -0.86
CAST-223ENST00000508608 MDFICQ9P1T7 246 aa9.7□□□□□ -0.86
CAST-223ENST00000508608 IGHV3-30P01768 117 aa9.69□□□□□ -0.86
CAST-223ENST00000508608 IGHV3-30-5P0DP03 117 aa9.69□□□□□ -0.86
CAST-223ENST00000508608 PSMB2P49721 201 aa9.69□□□□□ -0.86
CAST-223ENST00000508608 TSPEAR-AS2P59090 65 aa9.69□□□□□ -0.86
CAST-223ENST00000508608 TMEM95Q3KNT9 176 aa9.69□□□□□ -0.86
CAST-223ENST00000508608 ZFHX3Q15911 3703 aa9.69□□□□□ -0.86
CAST-223ENST00000508608 TRBV20-1A0A075B6N2 111 aa9.68□□□□□ -0.86
CAST-223ENST00000508608 TRGV11A0A075B6L2 103 aa9.68□□□□□ -0.86
CAST-223ENST00000508608 TRAV12-2A0A075B6T6 113 aa9.68□□□□□ -0.86
CAST-223ENST00000508608 I3L3M4 83 aa9.68□□□□□ -0.86
CAST-223ENST00000508608 DEFB104AQ8WTQ1 72 aa9.68□□□□□ -0.86
CAST-223ENST00000508608 LEPROTO15243 131 aa9.67□□□□□ -0.86
CAST-223ENST00000508608 IGKV3-20P01619 116 aa9.67□□□□□ -0.86
CAST-223ENST00000508608 SMAGPQ0VAQ4 97 aa9.67□□□□□ -0.86
CAST-223ENST00000508608 FOXI1Q12951 378 aa9.67□□□□□ -0.86
CAST-223ENST00000508608 SPINK13Q1W4C9 94 aa9.67□□□□□ -0.86
CAST-223ENST00000508608 C10orf126Q8N4M7 172 aa9.67□□□□□ -0.86
CAST-223ENST00000508608 C20orf203Q8NBC4 194 aa9.67□□□□□ -0.86
CAST-223ENST00000508608 AMELXQ99217 191 aa9.67□□□□□ -0.86
CAST-223ENST00000508608 TMEM223A0PJW6 202 aa9.66□□□□□ -0.86
CAST-223ENST00000508608 AVPP01185 164 aa9.66□□□□□ -0.86
CAST-223ENST00000508608 DSCR9P59020 149 aa9.66□□□□□ -0.86
CAST-223ENST00000508608 IGHV4-59P01825 116 aa9.66□□□□□ -0.86
CAST-223ENST00000508608 CFC1BP0CG36 223 aa9.66□□□□□ -0.86
CAST-223ENST00000508608 CFC1P0CG37 223 aa9.66□□□□□ -0.86
CAST-223ENST00000508608 RNF152Q8N8N0 203 aa9.66□□□□□ -0.86
CAST-223ENST00000508608 PRO1854Q9UHT4 67 aa9.66□□□□□ -0.86
CAST-223ENST00000508608 SMCPP49901 116 aaPredicted RBP9.65□□□□□ -0.86
CAST-223ENST00000508608 DEFB112Q30KQ8 113 aa9.65□□□□□ -0.86
CAST-223ENST00000508608 EDA2RQ9HAV5 297 aa9.65□□□□□ -0.86
CAST-223ENST00000508608 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.64□□□□□ -0.875e-7■■■■■ 33.7
CAST-223ENST00000508608 CELSR1Q9NYQ6 3014 aa9.64□□□□□ -0.87
CAST-223ENST00000508608 RHODO00212 210 aa9.64□□□□□ -0.87
CAST-223ENST00000508608 INSL3P51460 131 aa9.64□□□□□ -0.87
CAST-223ENST00000508608 SFTA2Q6UW10 78 aa9.64□□□□□ -0.87
CAST-223ENST00000508608 ZNF418Q8TF45 676 aaPredicted RBP9.64□□□□□ -0.87
CAST-223ENST00000508608 VCX2Q9H322 139 aa9.64□□□□□ -0.87
CAST-223ENST00000508608 P0DMU3 169 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms