RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 CCL20P78556 96 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 RNF212Q495C1 297 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 FAM159AQ6UWV7 190 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 TMUB2Q71RG4 321 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 TMEM75Q8N9X5 138 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 C15orf53Q8NAA6 179 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 ZNF680Q8NEM1 530 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 FAM213BQ8TBF2 198 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 SFT2D1Q8WV19 159 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 VSIG2Q96IQ7 327 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 LINC00467Q9BRT7 94 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 TMEM167BQ9NRX6 74 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 HHLA3Q9XRX5 114 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 DNAH17Q9UFH2 4485 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 IGHV3-73A0A0B4J1V6 119 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 TRAV21A0A0B4J279 112 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 TRGV4A0A0C4DH28 118 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 TRBV7-9A0A0J9YWB2 115 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 A0A0U1RRA0 63 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 CTXND1A0A1B0GTU2 59 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 A0A1W2PRE2 83 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 MAP1LC3B2A6NCE7 125 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 FAM74A7A6NL05 159 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 HMSDA8MTL9 139 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 C9JCJ5 164 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 PEX7O00628 323 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 CRIP1P50238 77 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 CCL18P55774 89 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 LINC01547P58512 204 aaPredicted RBP3.11□□□□□ -1.91
NUP54-206ENST00000508465 FLI1Q01543 452 aaPredicted RBP3.11□□□□□ -1.91
NUP54-206ENST00000508465 LGALS9BQ3B8N2 356 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 LGALSLQ3ZCW2 172 aaPredicted RBP3.11□□□□□ -1.91
NUP54-206ENST00000508465 Q6AWC8 147 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 CD164L2Q6UWJ8 174 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 Q6ZR54 194 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 C5orf17Q8NAS9 161 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 ZNRF2Q8NHG8 242 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 ALKBH7Q9BT30 221 aaPredicted RBP3.11□□□□□ -1.91
NUP54-206ENST00000508465 ZNF471Q9BX82 626 aaPredicted RBP3.11□□□□□ -1.91
NUP54-206ENST00000508465 MAP1LC3BQ9GZQ8 125 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 LENEPQ9Y5L5 61 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 HECTD4Q9Y4D8 3996 aa3.11□□□□□ -1.91
NUP54-206ENST00000508465 TMSB15BA0A087X1C1 80 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 A0A0D9SG52 128 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 LOC100131303A0A0U1RQF7 123 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 NBDYA0A0U1RRE5 68 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 KANTRA0A1W2PQU2 76 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 GRIFINA4D1Z8 144 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 K7EQM0 130 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 M0R036 132 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 M0R2P5 195 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 BCL2L11O43521 198 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 PFDN1O60925 122 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 ORM1P02763 201 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 TYMSP04818 313 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 CRYBA4P53673 196 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 KRTAP13-3Q3SY46 172 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 SMUG1Q53HV7 270 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 IBA57Q5T440 356 aaKnown RBP3.1□□□□□ -1.91
NUP54-206ENST00000508465 C1orf134Q5TEV5 83 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 DPPA3Q6W0C5 159 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 CYB561D1Q8N8Q1 229 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 OR4C5Q8NGB2 326 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 STOML3Q8TAV4 291 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 RASL10AQ92737 203 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 ZC2HC1AQ96GY0 325 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 NDFIP1Q9BT67 221 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 ARL2-SNX15V9GYD0 113 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 PKD1P98161 4303 aa3.1□□□□□ -1.91
NUP54-206ENST00000508465 FAT2Q9NYQ8 4349 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 A0A1B0GVG6 124 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 SERTM2A0A1B0GWG4 89 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 FABP5P3A8MUU1 101 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 PFN1P07737 140 aaKnown RBP3.09□□□□□ -1.91
NUP54-206ENST00000508465 SEC11BP0C7V7 166 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 PPT1P50897 306 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 TDRG1Q3Y452 100 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 ZNF876PQ49A33 203 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 SAPCD1Q5SSQ6 148 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 ZC2HC1BQ5TFG8 222 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 LYPD5Q6UWN5 251 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 ERASQ7Z444 233 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 NFE4Q86UQ8 179 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 MBD3L1Q8WWY6 194 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 KCNS1Q96KK3 526 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 LITAFQ99732 161 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 JPT2Q9H910 190 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 Q9UF83 564 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 PRO0255Q9UI72 69 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 ICOSQ9Y6W8 199 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 MUC4Q99102 2169 aa3.09□□□□□ -1.91
NUP54-206ENST00000508465 PKHD1P08F94 4074 aa3.09□□□□□ -1.92
NUP54-206ENST00000508465 TRAV4A0A0B4J268 109 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 MUC21A0A0G2JKD1 596 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 MUC21A0A140T8X8 626 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 RAB19A4D1S5 217 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 B4DEV8 164 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 UMAD1C9J7I0 102 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 KRBOX1C9JBD0 128 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms