RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 DNLZQ5SXM8 178 aa9.58□□□□□ -0.88
RAB28-205ENST00000508274 CDPF1Q6NVV7 123 aa9.58□□□□□ -0.88
RAB28-205ENST00000508274 SFT2D1Q8WV19 159 aa9.58□□□□□ -0.88
RAB28-205ENST00000508274 ZNF471Q9BX82 626 aaPredicted RBP9.58□□□□□ -0.88
RAB28-205ENST00000508274 Q9HAA7 133 aa9.58□□□□□ -0.88
RAB28-205ENST00000508274 TRBV6-1A0A0K0K1D8 114 aa9.57□□□□□ -0.88
RAB28-205ENST00000508274 HMSDA8MTL9 139 aa9.57□□□□□ -0.88
RAB28-205ENST00000508274 IBA57-AS1B1ANH7 110 aa9.57□□□□□ -0.88
RAB28-205ENST00000508274 LORP23490 312 aaPredicted RBP9.57□□□□□ -0.88
RAB28-205ENST00000508274 KRTAP10-1P60331 282 aa9.57□□□□□ -0.88
RAB28-205ENST00000508274 FAM74A4Q5TZK3 123 aa9.57□□□□□ -0.88
RAB28-205ENST00000508274 TCEAL7Q9BRU2 100 aa9.57□□□□□ -0.88
RAB28-205ENST00000508274 SCO2A0A1W2PP80 73 aa9.56□□□□□ -0.88
RAB28-205ENST00000508274 KANTRA0A1W2PQU2 76 aa9.56□□□□□ -0.88
RAB28-205ENST00000508274 LRCOL1A6NCL2 159 aa9.56□□□□□ -0.88
RAB28-205ENST00000508274 BCL2L11O43521 198 aa9.56□□□□□ -0.88
RAB28-205ENST00000508274 PSCAO43653 123 aa9.56□□□□□ -0.88
RAB28-205ENST00000508274 MBD3L1Q8WWY6 194 aa9.56□□□□□ -0.88
RAB28-205ENST00000508274 A0A087WWL8 130 aa9.55□□□□□ -0.88
RAB28-205ENST00000508274 M0R381 172 aa9.55□□□□□ -0.88
RAB28-205ENST00000508274 SYT8Q8NBV8 401 aa9.55□□□□□ -0.88
RAB28-205ENST00000508274 PHLDA3Q9Y5J5 127 aa9.55□□□□□ -0.88
RAB28-205ENST00000508274 FAT1Q14517 4588 aa9.55□□□□□ -0.88
RAB28-205ENST00000508274 A0A0D9SG52 128 aa9.54□□□□□ -0.88
RAB28-205ENST00000508274 UMAD1C9J7I0 102 aa9.54□□□□□ -0.88
RAB28-205ENST00000508274 XGP55808 180 aa9.54□□□□□ -0.88
RAB28-205ENST00000508274 RPL19P84098 196 aaKnown RBP9.54□□□□□ -0.88
RAB28-205ENST00000508274 RHODO00212 210 aa9.54□□□□□ -0.88
RAB28-205ENST00000508274 TPT1P13693 172 aaKnown RBP9.54□□□□□ -0.88
RAB28-205ENST00000508274 SFRP2Q96HF1 295 aa9.54□□□□□ -0.88
RAB28-205ENST00000508274 TCTE3Q8IZS6 198 aa9.53□□□□□ -0.88
RAB28-205ENST00000508274 H2AFB1P0C5Y9 115 aa9.52□□□□□ -0.89
RAB28-205ENST00000508274 TMUB2Q71RG4 321 aa9.52□□□□□ -0.89
RAB28-205ENST00000508274 DAZ4Q86SG3 579 aaKnown RBP9.52□□□□□ -0.89
RAB28-205ENST00000508274 ZFP82Q8N141 532 aa9.52□□□□□ -0.89
RAB28-205ENST00000508274 MLST8Q9BVC4 326 aa9.52□□□□□ -0.89
RAB28-205ENST00000508274 DAZ3Q9NR90 486 aaKnown RBP9.52□□□□□ -0.89
RAB28-205ENST00000508274 HAMPP81172 84 aa9.51□□□□□ -0.89
RAB28-205ENST00000508274 LAGE3Q14657 143 aa9.51□□□□□ -0.89
RAB28-205ENST00000508274 BAGE2Q86Y30 109 aa9.51□□□□□ -0.89
RAB28-205ENST00000508274 OR10AG1Q8NH19 301 aa9.51□□□□□ -0.89
RAB28-205ENST00000508274 GCSHP23434 173 aa9.5□□□□□ -0.89
RAB28-205ENST00000508274 CCL20P78556 96 aa9.5□□□□□ -0.89
RAB28-205ENST00000508274 WFDC2Q14508 124 aa9.5□□□□□ -0.89
RAB28-205ENST00000508274 IGLV5-52A0A0A0MRZ9 124 aa9.5□□□□□ -0.89
RAB28-205ENST00000508274 MUC21A0A0G2JKD1 596 aa9.5□□□□□ -0.89
RAB28-205ENST00000508274 MUC21A0A140T8X8 626 aa9.5□□□□□ -0.89
RAB28-205ENST00000508274 S100A9P06702 114 aaKnown RBP9.5□□□□□ -0.89
RAB28-205ENST00000508274 NKX2-5P52952 324 aaPredicted RBP9.5□□□□□ -0.89
RAB28-205ENST00000508274 PRR27Q6MZM9 219 aa9.5□□□□□ -0.89
RAB28-205ENST00000508274 Q8N814 137 aa9.5□□□□□ -0.89
RAB28-205ENST00000508274 DNAJC30Q96LL9 226 aa9.5□□□□□ -0.89
RAB28-205ENST00000508274 DERL1Q9BUN8 251 aa9.5□□□□□ -0.89
RAB28-205ENST00000508274 A0A087WWC5 75 aa9.49□□□□□ -0.89
RAB28-205ENST00000508274 EIF5AP63241 154 aaKnown RBP9.49□□□□□ -0.89
RAB28-205ENST00000508274 GNG13Q9P2W3 67 aa9.49□□□□□ -0.89
RAB28-205ENST00000508274 EPM2AB3EWF7 344 aa9.48□□□□□ -0.89
RAB28-205ENST00000508274 C1QBP02746 253 aa9.48□□□□□ -0.89
RAB28-205ENST00000508274 CXCL1P09341 107 aa9.48□□□□□ -0.89
RAB28-205ENST00000508274 RPL35P42766 123 aaKnown RBP9.48□□□□□ -0.89
RAB28-205ENST00000508274 LECT2O14960 151 aa9.47□□□□□ -0.89
RAB28-205ENST00000508274 UBE2D3P61077 147 aa9.47□□□□□ -0.89
RAB28-205ENST00000508274 SSTP61278 116 aa9.47□□□□□ -0.89
RAB28-205ENST00000508274 UBE2D2P62837 147 aa9.47□□□□□ -0.89
RAB28-205ENST00000508274 IFITM2Q01629 132 aa9.47□□□□□ -0.89
RAB28-205ENST00000508274 NIT1Q86X76 327 aa9.47□□□□□ -0.89
RAB28-205ENST00000508274 NTN5Q8WTR8 489 aaPredicted RBP9.47□□□□□ -0.89
RAB28-205ENST00000508274 TRBV10-1A0A0K0K1A3 114 aa9.46□□□□□ -0.89
RAB28-205ENST00000508274 A6NJY4 79 aa9.46□□□□□ -0.89
RAB28-205ENST00000508274 SNAI2O43623 268 aa9.46□□□□□ -0.89
RAB28-205ENST00000508274 RPL36AP83881 106 aaKnown RBP9.46□□□□□ -0.89
RAB28-205ENST00000508274 ZNF56Q15929 161 aa9.46□□□□□ -0.89
RAB28-205ENST00000508274 RPL36ALQ969Q0 106 aaKnown RBP9.46□□□□□ -0.89
RAB28-205ENST00000508274 C11orf52Q96A22 123 aa9.46□□□□□ -0.89
RAB28-205ENST00000508274 MANBALQ9NQG1 85 aa9.46□□□□□ -0.89
RAB28-205ENST00000508274 TRBV7-3A0A075B6L6 115 aa9.46□□□□□ -0.9
RAB28-205ENST00000508274 TRAV8-3A0A0A6YYJ7 113 aa9.46□□□□□ -0.9
RAB28-205ENST00000508274 SMR3BP02814 79 aaPredicted RBP9.46□□□□□ -0.9
RAB28-205ENST00000508274 Q5VSD8 79 aa9.46□□□□□ -0.9
RAB28-205ENST00000508274 NEXN-AS1Q8NBZ9 246 aa9.46□□□□□ -0.9
RAB28-205ENST00000508274 SSBP4Q9BWG4 385 aaPredicted RBP9.46□□□□□ -0.9
RAB28-205ENST00000508274 TM2D2Q9BX73 214 aa9.46□□□□□ -0.9
RAB28-205ENST00000508274 URGCP-MRPS24S4R325 110 aa9.46□□□□□ -0.9
RAB28-205ENST00000508274 TRAV1-1A0A0B4J248 108 aa9.45□□□□□ -0.9
RAB28-205ENST00000508274 ATP6V1G1O75348 118 aa9.45□□□□□ -0.9
RAB28-205ENST00000508274 OR5AL1P0C617 328 aa9.45□□□□□ -0.9
RAB28-205ENST00000508274 CENPWQ5EE01 88 aa9.45□□□□□ -0.9
RAB28-205ENST00000508274 SPANXN1Q5VSR9 72 aa9.45□□□□□ -0.9
RAB28-205ENST00000508274 KLK12Q9UKR0 248 aa9.45□□□□□ -0.9
RAB28-205ENST00000508274 IGLV2-8P01709 118 aa9.44□□□□□ -0.9
RAB28-205ENST00000508274 GZMBP10144 247 aa9.44□□□□□ -0.9
RAB28-205ENST00000508274 RAB4BP61018 213 aa9.44□□□□□ -0.9
RAB28-205ENST00000508274 TOR2AQ5JU69 321 aa9.44□□□□□ -0.9
RAB28-205ENST00000508274 OR10G8Q8NGN5 311 aa9.44□□□□□ -0.9
RAB28-205ENST00000508274 FAM30AQ9NZY2 134 aa9.44□□□□□ -0.9
RAB28-205ENST00000508274 DNAH8Q96JB1 4490 aa9.44□□□□□ -0.9
RAB28-205ENST00000508274 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.43□□□□□ -0.9
RAB28-205ENST00000508274 RAB19A4D1S5 217 aa9.43□□□□□ -0.9
RAB28-205ENST00000508274 RBFOX3A6NFN3 312 aa9.43□□□□□ -0.9
RAB28-205ENST00000508274 SULT1A2P50226 295 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms