RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 DEFB130BP0DP73 79 aa12.49□□□□□ -0.41
RNF4-209ENST00000507784 DEFB130AP0DP74 79 aa12.49□□□□□ -0.41
RNF4-209ENST00000507784 FAM222AQ5U5X8 452 aa12.49□□□□□ -0.41
RNF4-209ENST00000507784 B9D2Q9BPU9 175 aa12.49□□□□□ -0.41
RNF4-209ENST00000507784 SAMD10Q9BYL1 202 aa12.49□□□□□ -0.41
RNF4-209ENST00000507784 F5H697 171 aa12.48□□□□□ -0.41
RNF4-209ENST00000507784 RS1O15537 224 aa12.48□□□□□ -0.41
RNF4-209ENST00000507784 TRGC2P03986 189 aa12.48□□□□□ -0.41
RNF4-209ENST00000507784 KIAA1644Q3SXP7 199 aa12.48□□□□□ -0.41
RNF4-209ENST00000507784 PIK3CD-AS1Q5SR53 167 aa12.48□□□□□ -0.41
RNF4-209ENST00000507784 FAM104BQ5XKR9 115 aa12.48□□□□□ -0.41
RNF4-209ENST00000507784 OR4C5Q8NGB2 326 aa12.48□□□□□ -0.41
RNF4-209ENST00000507784 LYRM9A8MSI8 78 aa12.47□□□□□ -0.41
RNF4-209ENST00000507784 IGHV3-53P01767 116 aa12.47□□□□□ -0.41
RNF4-209ENST00000507784 SLAQ13239 276 aa12.47□□□□□ -0.41
RNF4-209ENST00000507784 NBEAL1Q6ZS30 2694 aa12.46□□□□□ -0.41
RNF4-209ENST00000507784 CRYGDP07320 174 aa12.46□□□□□ -0.41
RNF4-209ENST00000507784 SPART-AS1P0CW21 52 aa12.46□□□□□ -0.41
RNF4-209ENST00000507784 RAB4AP20338 218 aa12.46□□□□□ -0.41
RNF4-209ENST00000507784 ZNF56Q15929 161 aa12.46□□□□□ -0.41
RNF4-209ENST00000507784 MRPL51Q4U2R6 128 aaKnown RBP12.46□□□□□ -0.41
RNF4-209ENST00000507784 CFAP126Q5VTH2 177 aa12.46□□□□□ -0.41
RNF4-209ENST00000507784 RNF185Q96GF1 192 aa12.46□□□□□ -0.41
RNF4-209ENST00000507784 NDUFAF3Q9BU61 184 aa12.46□□□□□ -0.41
RNF4-209ENST00000507784 DKK2Q9UBU2 259 aa12.46□□□□□ -0.41
RNF4-209ENST00000507784 KIF25-AS1Q9Y6Z4 181 aa12.46□□□□□ -0.41
RNF4-209ENST00000507784 TRAV4A0A0B4J268 109 aa12.45□□□□□ -0.42
RNF4-209ENST00000507784 A0A0J9YWU9 116 aa12.45□□□□□ -0.42
RNF4-209ENST00000507784 DAD1P61803 113 aa12.45□□□□□ -0.42
RNF4-209ENST00000507784 CELA1Q9UNI1 258 aa12.45□□□□□ -0.42
RNF4-209ENST00000507784 C1orf196B1AJZ1 125 aa12.44□□□□□ -0.42
RNF4-209ENST00000507784 SMKR1H3BMG3 65 aa12.44□□□□□ -0.42
RNF4-209ENST00000507784 POM121L12Q8N7R1 296 aa12.44□□□□□ -0.42
RNF4-209ENST00000507784 CKS2P33552 79 aa12.43□□□□□ -0.42
RNF4-209ENST00000507784 ZNF479Q96JC4 524 aa12.43□□□□□ -0.42
RNF4-209ENST00000507784 C11orf68Q9H3H3 251 aaKnown RBP12.43□□□□□ -0.42
RNF4-209ENST00000507784 NBEAL2Q6ZNJ1 2754 aa12.42□□□□□ -0.42
RNF4-209ENST00000507784 TRAV26-2A0A0B4J265 109 aa12.42□□□□□ -0.42
RNF4-209ENST00000507784 TEX48A0A1B0GUV7 120 aa12.42□□□□□ -0.42
RNF4-209ENST00000507784 RHODO00212 210 aa12.42□□□□□ -0.42
RNF4-209ENST00000507784 NCR2O95944 276 aa12.42□□□□□ -0.42
RNF4-209ENST00000507784 LINC00315P59091 139 aa12.42□□□□□ -0.42
RNF4-209ENST00000507784 SUMO4Q6EEV6 95 aa12.42□□□□□ -0.42
RNF4-209ENST00000507784 LINC00612Q8N6U2 182 aa12.42□□□□□ -0.42
RNF4-209ENST00000507784 NACAE9PAV3 2078 aa12.42□□□□□ -0.42
RNF4-209ENST00000507784 TRGV4A0A0C4DH28 118 aa12.41□□□□□ -0.42
RNF4-209ENST00000507784 D6R8Y8 96 aa12.41□□□□□ -0.42
RNF4-209ENST00000507784 MRAP2Q96G30 205 aa12.41□□□□□ -0.42
RNF4-209ENST00000507784 NHLRC4P0CG21 123 aaPredicted RBP12.4□□□□□ -0.42
RNF4-209ENST00000507784 GATA1P15976 413 aaPredicted RBP12.4□□□□□ -0.42
RNF4-209ENST00000507784 SRIP30626 198 aa12.4□□□□□ -0.42
RNF4-209ENST00000507784 UFSP1Q6NVU6 142 aa12.4□□□□□ -0.42
RNF4-209ENST00000507784 ZFP2Q6ZN57 461 aa12.4□□□□□ -0.42
RNF4-209ENST00000507784 ORMDL3Q8N138 153 aa12.4□□□□□ -0.42
RNF4-209ENST00000507784 PRELID3AQ96N28 172 aa12.4□□□□□ -0.42
RNF4-209ENST00000507784 CIDEAO60543 219 aa12.39□□□□□ -0.43
RNF4-209ENST00000507784 ALKBH7Q9BT30 221 aaPredicted RBP12.39□□□□□ -0.43
RNF4-209ENST00000507784 PHOX2AO14813 284 aa12.38□□□□□ -0.43
RNF4-209ENST00000507784 GAS8-AS1O95177 125 aa12.38□□□□□ -0.43
RNF4-209ENST00000507784 PPBPP02775 128 aa12.38□□□□□ -0.43
RNF4-209ENST00000507784 HTN3P15516 51 aa12.38□□□□□ -0.43
RNF4-209ENST00000507784 RAB5BP61020 215 aa12.38□□□□□ -0.43
RNF4-209ENST00000507784 Q6ZSN1 163 aa12.38□□□□□ -0.43
RNF4-209ENST00000507784 C11orf45Q8TAV5 145 aa12.38□□□□□ -0.43
RNF4-209ENST00000507784 U3KQK5 164 aa12.38□□□□□ -0.43
RNF4-209ENST00000507784 ATP5G1P05496 136 aa12.37□□□□□ -0.43
RNF4-209ENST00000507784 C12orf74Q32Q52 190 aa12.37□□□□□ -0.43
RNF4-209ENST00000507784 C18orf15Q96N68 181 aa12.37□□□□□ -0.43
RNF4-209ENST00000507784 TMA7Q9Y2S6 64 aaKnown RBP12.37□□□□□ -0.43
RNF4-209ENST00000507784 H7C1H1 209 aa12.36□□□□□ -0.43
RNF4-209ENST00000507784 NPYP01303 97 aa12.36□□□□□ -0.43
RNF4-209ENST00000507784 FHL2Q14192 279 aa12.36□□□□□ -0.43
RNF4-209ENST00000507784 OR10J3Q5JRS4 329 aa12.36□□□□□ -0.43
RNF4-209ENST00000507784 RPL39LQ96EH5 51 aaKnown RBP12.36□□□□□ -0.43
RNF4-209ENST00000507784 LOC389332A0A1B0GUA5 103 aa12.35□□□□□ -0.43
RNF4-209ENST00000507784 F5H768 121 aa12.35□□□□□ -0.43
RNF4-209ENST00000507784 M0QY20 66 aa12.35□□□□□ -0.43
RNF4-209ENST00000507784 TNFRSF6BO95407 300 aa12.35□□□□□ -0.43
RNF4-209ENST00000507784 NANOS2P60321 138 aaKnown RBP12.35□□□□□ -0.43
RNF4-209ENST00000507784 IQCJQ1A5X6 159 aa12.35□□□□□ -0.43
RNF4-209ENST00000507784 K7EQD1 137 aa12.34□□□□□ -0.43
RNF4-209ENST00000507784 HIST1H2BKO60814 126 aa12.34□□□□□ -0.43
RNF4-209ENST00000507784 HIST1H2BJP06899 126 aa12.34□□□□□ -0.43
RNF4-209ENST00000507784 P0DMU3 169 aa12.34□□□□□ -0.43
RNF4-209ENST00000507784 FAM231AP0DMU4 169 aa12.34□□□□□ -0.43
RNF4-209ENST00000507784 FAM231CP0DMU5 169 aa12.34□□□□□ -0.43
RNF4-209ENST00000507784 HIST1H2BOP23527 126 aa12.34□□□□□ -0.43
RNF4-209ENST00000507784 HIST1H2BBP33778 126 aa12.34□□□□□ -0.43
RNF4-209ENST00000507784 HIST1H2BDP58876 126 aa12.34□□□□□ -0.43
RNF4-209ENST00000507784 HIST1H2BCP62807 126 aa12.34□□□□□ -0.43
RNF4-209ENST00000507784 HIST2H2BEQ16778 126 aa12.34□□□□□ -0.43
RNF4-209ENST00000507784 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.34□□□□□ -0.43
RNF4-209ENST00000507784 HIST1H2BHQ93079 126 aa12.34□□□□□ -0.43
RNF4-209ENST00000507784 HIST1H2BNQ99877 126 aa12.34□□□□□ -0.43
RNF4-209ENST00000507784 HIST1H2BMQ99879 126 aa12.34□□□□□ -0.43
RNF4-209ENST00000507784 PPP1R17O96001 155 aa12.33□□□□□ -0.44
RNF4-209ENST00000507784 HOXA5P20719 270 aa12.33□□□□□ -0.44
RNF4-209ENST00000507784 NDUFA6P56556 154 aa12.33□□□□□ -0.44
RNF4-209ENST00000507784 SLC25A29Q8N8R3 303 aa12.33□□□□□ -0.44
RNF4-209ENST00000507784 NRACQ8N912 160 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms