RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 TOMM20LQ6UXN7 152 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 FOXI2Q6ZQN5 318 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 SSX7Q7RTT5 188 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 LYZL2Q7Z4W2 148 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 S100A7AQ86SG5 101 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 OR4C16Q8NGL9 310 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 ARHGAP5-AS1Q96IT6 56 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 PECRQ9BY49 303 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 C8orf4Q9NR00 106 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 NDUFA4L2Q9NRX3 87 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 FAT1Q14517 4588 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 TRAV5A0A0B4J249 113 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 E7EUB6 86 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 M0R129 80 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 ATP8B1O43520 1251 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 S1PR2O95136 353 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 HLA-DRB4P13762 266 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 CRYBB3P26998 211 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 RPL5P46777 297 aaKnown RBP2.75□□□□□ -1.97
HERC4-213ENST00000506515 PSG9Q00887 426 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 PSMG4Q5JS54 123 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 C10orf55Q5SWW7 151 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 ZNF767PQ75MW2 155 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 FAM19A3Q7Z5A8 133 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 C10orf126Q8N4M7 172 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 FER1L6-AS1Q8NA97 138 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 TMEM203Q969S6 136 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 GNPNAT1Q96EK6 184 aaPredicted RBP2.75□□□□□ -1.97
HERC4-213ENST00000506515 PDCD10Q9BUL8 212 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 C9orf16Q9BUW7 83 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 FAM107BQ9H098 131 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 LPAR5Q9H1C0 372 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 SH3BGRL3Q9H299 93 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 ENY2Q9NPA8 101 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 RPRMQ9NS64 109 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 TIMM8BQ9Y5J9 83 aaPredicted RBP2.75□□□□□ -1.97
HERC4-213ENST00000506515 HLA-DRB4X5D2U9 266 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 HMCN2Q8NDA2 5059 aa2.75□□□□□ -1.97
HERC4-213ENST00000506515 IGLV10-54A0A075B6I4 117 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 IGKV1D-37A0A075B6S9 117 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 KNCNA6PVL3 124 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 K7EIM0 57 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 MT-CO2P00403 227 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 CFDP00746 253 aaPredicted RBP2.74□□□□□ -1.97
HERC4-213ENST00000506515 SLC25A4P12235 298 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 HIST1H1DP16402 221 aaKnown RBP2.74□□□□□ -1.97
HERC4-213ENST00000506515 EVI2AP22794 236 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 RAB2AP61019 212 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 HSPE1P61604 102 aaKnown RBP2.74□□□□□ -1.97
HERC4-213ENST00000506515 RPS25P62851 125 aaKnown RBP2.74□□□□□ -1.97
HERC4-213ENST00000506515 QRFPP83859 136 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 C1orf194Q5T5A4 169 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 FAM162BQ5T6X4 162 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 OR10K2Q6IF99 312 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 DCANP1Q8TF63 244 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 KCNIP2Q9NS61 270 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 TAS2R8Q9NYW2 309 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 LINC00588Q9Y4M8 146 aa2.74□□□□□ -1.97
HERC4-213ENST00000506515 PIGBOS1A0A0B4J2F0 54 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 C8orf87E5RJ46 101 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 I3L2K1 104 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 PSCAO43653 123 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 UCHL1P09936 223 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 DEFB130BP0DP73 79 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 DEFB130AP0DP74 79 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 AKR1C4P17516 323 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 PSMB3P49720 205 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 YPEL3P61236 119 aaPredicted RBP2.73□□□□□ -1.97
HERC4-213ENST00000506515 WT1-ASQ06250 92 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 AADACL3Q5VUY0 350 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 HACD4Q5VWC8 232 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 OR4B1Q8NGF8 309 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 OR4X1Q8NH49 305 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 LINC00052Q96N35 136 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 HIGD2AQ9BW72 106 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 MND1Q9BWT6 205 aa2.73□□□□□ -1.97
HERC4-213ENST00000506515 MRPS16Q9Y3D3 137 aaKnown RBP2.73□□□□□ -1.97
HERC4-213ENST00000506515 RNF213Q63HN8 5207 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 TRBV24-1A0A075B6N3 115 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 A0A0A6YYH2 397 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 A6NJ64 397 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 SNRPGP15A8MWD9 76 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 TMEM250H0YL14 139 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 J3QRK9 145 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 RD3LP0DJH9 198 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 NFYAP23511 347 aaPredicted RBP2.72□□□□□ -1.97
HERC4-213ENST00000506515 MP68P56378 58 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 GNG2P59768 71 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 RPL30P62888 115 aaKnown RBP2.72□□□□□ -1.97
HERC4-213ENST00000506515 PRCDQ00LT1 54 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 SELENOHQ8IZQ5 122 aaKnown RBP2.72□□□□□ -1.97
HERC4-213ENST00000506515 RNASEH2CQ8TDP1 164 aaKnown RBP2.72□□□□□ -1.97
HERC4-213ENST00000506515 ARL6Q9H0F7 186 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 ATG5Q9H1Y0 275 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 DPH3P1Q9H4G8 78 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 SCN3BQ9NY72 215 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 PHLDA3Q9Y5J5 127 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 LY96Q9Y6Y9 160 aa2.72□□□□□ -1.97
HERC4-213ENST00000506515 A0A087WTM6 91 aa2.71□□□□□ -1.98
HERC4-213ENST00000506515 TRAV1-2A0A0B4J238 106 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms