RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 RPL39LQ96EH5 51 aaKnown RBP12.05□□□□□ -0.48
SCLT1-208ENST00000506368 U3KQE9 123 aa12.05□□□□□ -0.48
SCLT1-208ENST00000506368 TRAV4A0A0B4J268 109 aa12.04□□□□□ -0.48
SCLT1-208ENST00000506368 LINC01548A6NM66 108 aa12.04□□□□□ -0.48
SCLT1-208ENST00000506368 E7EQL1 145 aa12.04□□□□□ -0.48
SCLT1-208ENST00000506368 NXPH4O95158 308 aa12.04□□□□□ -0.48
SCLT1-208ENST00000506368 ZNF876PQ49A33 203 aa12.04□□□□□ -0.48
SCLT1-208ENST00000506368 VCYO14598 125 aa12.04□□□□□ -0.48
SCLT1-208ENST00000506368 OVOL1O14753 267 aa12.04□□□□□ -0.48
SCLT1-208ENST00000506368 LEPROTO15243 131 aa12.04□□□□□ -0.48
SCLT1-208ENST00000506368 DUSP14O95147 198 aaKnown RBP12.04□□□□□ -0.48
SCLT1-208ENST00000506368 PLA2G2AP14555 144 aa12.04□□□□□ -0.48
SCLT1-208ENST00000506368 AMELXQ99217 191 aa12.04□□□□□ -0.48
SCLT1-208ENST00000506368 TMEM126AQ9H061 195 aa12.04□□□□□ -0.48
SCLT1-208ENST00000506368 TP53TG1Q9Y2A0 90 aa12.04□□□□□ -0.48
SCLT1-208ENST00000506368 USP9XQ93008 2570 aaPredicted RBP12.04□□□□□ -0.48
SCLT1-208ENST00000506368 CLPSL1A2RUU4 121 aa12.03□□□□□ -0.48
SCLT1-208ENST00000506368 A4D1N5 150 aa12.03□□□□□ -0.48
SCLT1-208ENST00000506368 SDHAF1A6NFY7 115 aa12.03□□□□□ -0.48
SCLT1-208ENST00000506368 CDSNQ15517 529 aa12.03□□□□□ -0.48
SCLT1-208ENST00000506368 MINOS1Q5TGZ0 78 aa12.03□□□□□ -0.48
SCLT1-208ENST00000506368 Q6ZS46 218 aa12.03□□□□□ -0.48
SCLT1-208ENST00000506368 GPHB5Q86YW7 130 aa12.03□□□□□ -0.48
SCLT1-208ENST00000506368 C14orf178Q8N769 122 aaPredicted RBP12.03□□□□□ -0.48
SCLT1-208ENST00000506368 NTN5Q8WTR8 489 aaPredicted RBP12.03□□□□□ -0.48
SCLT1-208ENST00000506368 MINOS1-NBL1R4GNA1 71 aa12.03□□□□□ -0.48
SCLT1-208ENST00000506368 GCN1Q92616 2671 aaKnown RBP12.03□□□□□ -0.48
SCLT1-208ENST00000506368 A0A0G2JNJ9 132 aa12.02□□□□□ -0.48
SCLT1-208ENST00000506368 H3BT86 120 aa12.02□□□□□ -0.48
SCLT1-208ENST00000506368 TSHBP01222 138 aa12.02□□□□□ -0.48
SCLT1-208ENST00000506368 IGHV1-69P01742 117 aa12.02□□□□□ -0.48
SCLT1-208ENST00000506368 C15orf32Q32M92 178 aa12.02□□□□□ -0.48
SCLT1-208ENST00000506368 MDFICQ9P1T7 246 aa12.02□□□□□ -0.48
SCLT1-208ENST00000506368 Q9UFV3 132 aa12.02□□□□□ -0.48
SCLT1-208ENST00000506368 HELZ2Q9BYK8 2649 aaKnown RBP12.02□□□□□ -0.48
SCLT1-208ENST00000506368 ABCA1O95477 2261 aa12.02□□□□□ -0.48
SCLT1-208ENST00000506368 TRBV7-1A0A0A6YYK4 115 aa12.02□□□□□ -0.49
SCLT1-208ENST00000506368 H3BMM0 161 aa12.02□□□□□ -0.49
SCLT1-208ENST00000506368 MGPP08493 103 aa12.02□□□□□ -0.49
SCLT1-208ENST00000506368 ADORA2A-AS1P86434 159 aa12.02□□□□□ -0.49
SCLT1-208ENST00000506368 PRB3Q04118 309 aaPredicted RBP12.02□□□□□ -0.49
SCLT1-208ENST00000506368 TMEM170BQ5T4T1 132 aa12.02□□□□□ -0.49
SCLT1-208ENST00000506368 APRG1Q8IVJ8 170 aa12.02□□□□□ -0.49
SCLT1-208ENST00000506368 UBE2WQ96B02 151 aa12.02□□□□□ -0.49
SCLT1-208ENST00000506368 IGHV7-81A0A0B4J1V7 117 aa12.01□□□□□ -0.49
SCLT1-208ENST00000506368 ARL3P36405 182 aa12.01□□□□□ -0.49
SCLT1-208ENST00000506368 POLR2KP53803 58 aaKnown RBP12.01□□□□□ -0.49
SCLT1-208ENST00000506368 C1orf122Q6ZSJ8 110 aa12.01□□□□□ -0.49
SCLT1-208ENST00000506368 ITLN2Q8WWU7 325 aaPredicted RBP12.01□□□□□ -0.49
SCLT1-208ENST00000506368 EEF1AKMT3Q96AZ1 226 aa12.01□□□□□ -0.49
SCLT1-208ENST00000506368 C16orf92Q96LL3 132 aa12.01□□□□□ -0.49
SCLT1-208ENST00000506368 ICE1Q9Y2F5 2266 aa12.01□□□□□ -0.49
SCLT1-208ENST00000506368 SPTBN1Q01082 2364 aaKnown RBP12.01□□□□□ -0.49
SCLT1-208ENST00000506368 CCDC179H3BU77 68 aa12.01□□□□□ -0.49
SCLT1-208ENST00000506368 LGALS9O00182 355 aa12.01□□□□□ -0.49
SCLT1-208ENST00000506368 ODF3Q96PU9 254 aa12.01□□□□□ -0.49
SCLT1-208ENST00000506368 M0R2P5 195 aa12□□□□□ -0.49
SCLT1-208ENST00000506368 C15orf53Q8NAA6 179 aa12□□□□□ -0.49
SCLT1-208ENST00000506368 TSPEAR-AS2P59090 65 aa11.99□□□□□ -0.49
SCLT1-208ENST00000506368 ZFAND2AQ8N6M9 145 aa11.99□□□□□ -0.49
SCLT1-208ENST00000506368 TRBV6-5A0A0K0K1A5 114 aa11.99□□□□□ -0.49
SCLT1-208ENST00000506368 HERV-K104P63124 156 aa11.99□□□□□ -0.49
SCLT1-208ENST00000506368 TRPT1Q86TN4 253 aaKnown RBP11.99□□□□□ -0.49
SCLT1-208ENST00000506368 TRAV2A0A0B4J234 112 aa11.98□□□□□ -0.49
SCLT1-208ENST00000506368 TMEM223A0PJW6 202 aa11.98□□□□□ -0.49
SCLT1-208ENST00000506368 CRLF1O75462 422 aa11.98□□□□□ -0.49
SCLT1-208ENST00000506368 COX6CP09669 75 aa11.98□□□□□ -0.49
SCLT1-208ENST00000506368 DEFB121Q5J5C9 76 aa11.98□□□□□ -0.49
SCLT1-208ENST00000506368 PRR9Q5T870 116 aa11.98□□□□□ -0.49
SCLT1-208ENST00000506368 FASNP49327 2511 aaKnown RBP11.98□□□□□ -0.49
SCLT1-208ENST00000506368 TRBV27A0A0K0K1C4 114 aa11.98□□□□□ -0.49
SCLT1-208ENST00000506368 J3QKU1 62 aa11.98□□□□□ -0.49
SCLT1-208ENST00000506368 TGFAP01135 160 aa11.98□□□□□ -0.49
SCLT1-208ENST00000506368 CD3EP07766 207 aa11.98□□□□□ -0.49
SCLT1-208ENST00000506368 CRIP2P52943 208 aaPredicted RBP11.98□□□□□ -0.49
SCLT1-208ENST00000506368 RHOHQ15669 191 aa11.98□□□□□ -0.49
SCLT1-208ENST00000506368 Q1RN00 199 aa11.98□□□□□ -0.49
SCLT1-208ENST00000506368 IMUPQ9GZP8 106 aa11.98□□□□□ -0.49
SCLT1-208ENST00000506368 KIF25-AS1Q9Y6Z4 181 aa11.98□□□□□ -0.49
SCLT1-208ENST00000506368 TRBV7-7A0A0K0K1E9 115 aa11.97□□□□□ -0.49
SCLT1-208ENST00000506368 SMIM20Q8N5G0 67 aa11.97□□□□□ -0.49
SCLT1-208ENST00000506368 ZNRF2Q8NHG8 242 aa11.97□□□□□ -0.49
SCLT1-208ENST00000506368 FAM19A4Q96LR4 140 aa11.97□□□□□ -0.49
SCLT1-208ENST00000506368 ANXA2RQ3ZCQ2 193 aa11.96□□□□□ -0.49
SCLT1-208ENST00000506368 VMO1Q7Z5L0 202 aa11.96□□□□□ -0.49
SCLT1-208ENST00000506368 Q8N9W7 124 aa11.96□□□□□ -0.49
SCLT1-208ENST00000506368 CCDC140Q96MF4 163 aa11.96□□□□□ -0.49
SCLT1-208ENST00000506368 LRRK2Q5S007 2527 aa11.96□□□□□ -0.5
SCLT1-208ENST00000506368 IGHV3OR16-8A0A075B7F1 116 aa11.96□□□□□ -0.5
SCLT1-208ENST00000506368 ACYP1P07311 99 aa11.96□□□□□ -0.5
SCLT1-208ENST00000506368 NSUN5P1Q3KNT7 163 aa11.96□□□□□ -0.5
SCLT1-208ENST00000506368 SHISA2Q6UWI4 295 aa11.96□□□□□ -0.5
SCLT1-208ENST00000506368 FAM159AQ6UWV7 190 aa11.96□□□□□ -0.5
SCLT1-208ENST00000506368 MUSTN1Q8IVN3 82 aa11.96□□□□□ -0.5
SCLT1-208ENST00000506368 IGHV3-35A0A0C4DH35 117 aa11.95□□□□□ -0.5
SCLT1-208ENST00000506368 LINC00315P59091 139 aa11.95□□□□□ -0.5
SCLT1-208ENST00000506368 C2orf82Q6UX34 121 aa11.95□□□□□ -0.5
SCLT1-208ENST00000506368 CLEC19AQ6UXS0 136 aa11.95□□□□□ -0.5
SCLT1-208ENST00000506368 SPANXCQ9NY87 97 aa11.95□□□□□ -0.5
SCLT1-208ENST00000506368 TNFRSF18Q9Y5U5 241 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms