RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 NFE4Q86UQ8 179 aa11.18□□□□□ -0.62
PDLIM7-215ENST00000506161 DERL1Q9BUN8 251 aa11.18□□□□□ -0.62
PDLIM7-215ENST00000506161 Q9HAA7 133 aa11.18□□□□□ -0.62
PDLIM7-215ENST00000506161 EPM2AB3EWF7 344 aa11.17□□□□□ -0.62
PDLIM7-215ENST00000506161 UMAD1C9J7I0 102 aa11.17□□□□□ -0.62
PDLIM7-215ENST00000506161 M0R381 172 aa11.17□□□□□ -0.62
PDLIM7-215ENST00000506161 FAM74A4Q5TZK3 123 aa11.17□□□□□ -0.62
PDLIM7-215ENST00000506161 SFRP2Q96HF1 295 aa11.17□□□□□ -0.62
PDLIM7-215ENST00000506161 DNAJC30Q96LL9 226 aa11.17□□□□□ -0.62
PDLIM7-215ENST00000506161 MUC21A0A0G2JKD1 596 aa11.16□□□□□ -0.62
PDLIM7-215ENST00000506161 MUC21A0A140T8X8 626 aa11.16□□□□□ -0.62
PDLIM7-215ENST00000506161 H2AFB1P0C5Y9 115 aa11.16□□□□□ -0.62
PDLIM7-215ENST00000506161 INAFM2P0DMQ5 153 aa11.16□□□□□ -0.62
PDLIM7-215ENST00000506161 OR10AG1Q8NH19 301 aa11.16□□□□□ -0.62
PDLIM7-215ENST00000506161 TRAV8-6A0A0B4J262 113 aa11.15□□□□□ -0.62
PDLIM7-215ENST00000506161 K7EP13 123 aa11.15□□□□□ -0.62
PDLIM7-215ENST00000506161 HAMPP81172 84 aa11.15□□□□□ -0.62
PDLIM7-215ENST00000506161 TCEAL7Q9BRU2 100 aa11.15□□□□□ -0.62
PDLIM7-215ENST00000506161 TPT1P13693 172 aaKnown RBP11.14□□□□□ -0.63
PDLIM7-215ENST00000506161 DAZ4Q86SG3 579 aaKnown RBP11.14□□□□□ -0.63
PDLIM7-215ENST00000506161 C10orf126Q8N4M7 172 aa11.14□□□□□ -0.63
PDLIM7-215ENST00000506161 DAZ3Q9NR90 486 aaKnown RBP11.14□□□□□ -0.63
PDLIM7-215ENST00000506161 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
PDLIM7-215ENST00000506161 PHLDA3Q9Y5J5 127 aa11.14□□□□□ -0.63
PDLIM7-215ENST00000506161 IGLV2-8P01709 118 aa11.13□□□□□ -0.63
PDLIM7-215ENST00000506161 BAGE2Q86Y30 109 aa11.13□□□□□ -0.63
PDLIM7-215ENST00000506161 SYT8Q8NBV8 401 aa11.13□□□□□ -0.63
PDLIM7-215ENST00000506161 PFDN1O60925 122 aa11.12□□□□□ -0.63
PDLIM7-215ENST00000506161 RPL35P42766 123 aaKnown RBP11.12□□□□□ -0.63
PDLIM7-215ENST00000506161 PRR27Q6MZM9 219 aa11.12□□□□□ -0.63
PDLIM7-215ENST00000506161 GNG13Q9P2W3 67 aa11.12□□□□□ -0.63
PDLIM7-215ENST00000506161 RHODO00212 210 aa11.11□□□□□ -0.63
PDLIM7-215ENST00000506161 EREGO14944 169 aa11.11□□□□□ -0.63
PDLIM7-215ENST00000506161 SNAI2O43623 268 aa11.11□□□□□ -0.63
PDLIM7-215ENST00000506161 CDPF1Q6NVV7 123 aa11.11□□□□□ -0.63
PDLIM7-215ENST00000506161 ZFP82Q8N141 532 aa11.11□□□□□ -0.63
PDLIM7-215ENST00000506161 C11orf52Q96A22 123 aa11.11□□□□□ -0.63
PDLIM7-215ENST00000506161 SSBP4Q9BWG4 385 aaPredicted RBP11.11□□□□□ -0.63
PDLIM7-215ENST00000506161 GZMBP10144 247 aa11.1□□□□□ -0.63
PDLIM7-215ENST00000506161 SULT1A2P50226 295 aa11.1□□□□□ -0.63
PDLIM7-215ENST00000506161 SSTP61278 116 aa11.1□□□□□ -0.63
PDLIM7-215ENST00000506161 TCTE3Q8IZS6 198 aa11.1□□□□□ -0.63
PDLIM7-215ENST00000506161 TRBV20OR9-2A0A075B6H5 130 aa11.09□□□□□ -0.63
PDLIM7-215ENST00000506161 TRAV1-1A0A0B4J248 108 aa11.09□□□□□ -0.63
PDLIM7-215ENST00000506161 RAB19A4D1S5 217 aa11.09□□□□□ -0.63
PDLIM7-215ENST00000506161 S100A9P06702 114 aaKnown RBP11.09□□□□□ -0.63
PDLIM7-215ENST00000506161 UBE2D3P61077 147 aa11.09□□□□□ -0.63
PDLIM7-215ENST00000506161 UBE2D2P62837 147 aa11.09□□□□□ -0.63
PDLIM7-215ENST00000506161 Q6ZNX1 250 aa11.09□□□□□ -0.63
PDLIM7-215ENST00000506161 NIT1Q86X76 327 aa11.09□□□□□ -0.63
PDLIM7-215ENST00000506161 DNAH8Q96JB1 4490 aa11.09□□□□□ -0.63
PDLIM7-215ENST00000506161 FAT1Q14517 4588 aa11.08□□□□□ -0.64
PDLIM7-215ENST00000506161 RBFOX3A6NFN3 312 aa11.08□□□□□ -0.64
PDLIM7-215ENST00000506161 LECT2O14960 151 aa11.08□□□□□ -0.64
PDLIM7-215ENST00000506161 PSCAO43653 123 aa11.08□□□□□ -0.64
PDLIM7-215ENST00000506161 CXCL1P09341 107 aa11.08□□□□□ -0.64
PDLIM7-215ENST00000506161 EIF5AP63241 154 aaKnown RBP11.08□□□□□ -0.64
PDLIM7-215ENST00000506161 CENPWQ5EE01 88 aa11.08□□□□□ -0.64
PDLIM7-215ENST00000506161 Q8N814 137 aa11.08□□□□□ -0.64
PDLIM7-215ENST00000506161 NEXN-AS1Q8NBZ9 246 aa11.08□□□□□ -0.64
PDLIM7-215ENST00000506161 FAM30AQ9NZY2 134 aa11.08□□□□□ -0.64
PDLIM7-215ENST00000506161 KIF25-AS1Q9Y6Z4 181 aa11.08□□□□□ -0.64
PDLIM7-215ENST00000506161 GCSHP23434 173 aa11.07□□□□□ -0.64
PDLIM7-215ENST00000506161 LAGE3Q14657 143 aa11.07□□□□□ -0.64
PDLIM7-215ENST00000506161 MANBALQ9NQG1 85 aa11.07□□□□□ -0.64
PDLIM7-215ENST00000506161 C19orf71A6NCJ1 209 aa11.06□□□□□ -0.64
PDLIM7-215ENST00000506161 OR5AL1P0C617 328 aa11.06□□□□□ -0.64
PDLIM7-215ENST00000506161 IGLV5-52A0A0A0MRZ9 124 aa11.05□□□□□ -0.64
PDLIM7-215ENST00000506161 C1QBP02746 253 aa11.05□□□□□ -0.64
PDLIM7-215ENST00000506161 SMR3BP02814 79 aaPredicted RBP11.05□□□□□ -0.64
PDLIM7-215ENST00000506161 IGLC6P0CF74 106 aa11.05□□□□□ -0.64
PDLIM7-215ENST00000506161 ZNF56Q15929 161 aa11.05□□□□□ -0.64
PDLIM7-215ENST00000506161 OR10G8Q8NGN5 311 aa11.05□□□□□ -0.64
PDLIM7-215ENST00000506161 UBR4Q5T4S7 5183 aa11.05□□□□□ -0.64
PDLIM7-215ENST00000506161 TRBV7-3A0A075B6L6 115 aa11.04□□□□□ -0.64
PDLIM7-215ENST00000506161 TRBV10-1A0A0K0K1A3 114 aa11.04□□□□□ -0.64
PDLIM7-215ENST00000506161 RAB4BP61018 213 aa11.04□□□□□ -0.64
PDLIM7-215ENST00000506161 C9orf62Q8N4C0 152 aa11.04□□□□□ -0.64
PDLIM7-215ENST00000506161 KLK12Q9UKR0 248 aa11.04□□□□□ -0.64
PDLIM7-215ENST00000506161 hCG_2014768A0A024R1R8 64 aa11.03□□□□□ -0.64
PDLIM7-215ENST00000506161 A0A087WWC5 75 aa11.03□□□□□ -0.64
PDLIM7-215ENST00000506161 RAB5CP51148 216 aa11.03□□□□□ -0.64
PDLIM7-215ENST00000506161 RPL36AP83881 106 aaKnown RBP11.03□□□□□ -0.64
PDLIM7-215ENST00000506161 NTM-AS1Q6ZSK4 140 aa11.03□□□□□ -0.64
PDLIM7-215ENST00000506161 BAALCQ8WXS3 180 aa11.03□□□□□ -0.64
PDLIM7-215ENST00000506161 RPL36ALQ969Q0 106 aaKnown RBP11.03□□□□□ -0.64
PDLIM7-215ENST00000506161 VPS13BQ7Z7G8 4022 aa11.03□□□□□ -0.64
PDLIM7-215ENST00000506161 BCL2P10415 239 aa11.02□□□□□ -0.65
PDLIM7-215ENST00000506161 MEF2BQ02080 365 aaPredicted RBP11.02□□□□□ -0.65
PDLIM7-215ENST00000506161 LINC01620Q4KN68 170 aa11.02□□□□□ -0.65
PDLIM7-215ENST00000506161 Q5VSD8 79 aa11.02□□□□□ -0.65
PDLIM7-215ENST00000506161 SPANXN1Q5VSR9 72 aa11.02□□□□□ -0.65
PDLIM7-215ENST00000506161 MYCBP2O75592 4640 aa11.02□□□□□ -0.65
PDLIM7-215ENST00000506161 SLC51BQ86UW2 128 aa11.01□□□□□ -0.65
PDLIM7-215ENST00000506161 OR2D3Q8NGH3 330 aa11.01□□□□□ -0.65
PDLIM7-215ENST00000506161 NTN5Q8WTR8 489 aaPredicted RBP11.01□□□□□ -0.65
PDLIM7-215ENST00000506161 IGLV2-33A0A075B6J2 118 aaPredicted RBP11□□□□□ -0.65
PDLIM7-215ENST00000506161 TRBV6-8A0A0A6YYG3 113 aa11□□□□□ -0.65
PDLIM7-215ENST00000506161 MPV17L2Q567V2 206 aa11□□□□□ -0.65
PDLIM7-215ENST00000506161 ENHOQ6UWT2 76 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms