RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 SRPXP78539 464 aa4.34□□□□□ -1.71
VCAN-206ENST00000505615 RPL19P84098 196 aaKnown RBP4.34□□□□□ -1.71
VCAN-206ENST00000505615 TMEM78Q5T7P6 136 aa4.34□□□□□ -1.71
VCAN-206ENST00000505615 CFAP126Q5VTH2 177 aa4.34□□□□□ -1.71
VCAN-206ENST00000505615 C10orf113Q5VZT2 155 aa4.34□□□□□ -1.71
VCAN-206ENST00000505615 REG3GQ6UW15 175 aa4.34□□□□□ -1.71
VCAN-206ENST00000505615 EXOC3-AS1Q8N2X6 119 aa4.34□□□□□ -1.71
VCAN-206ENST00000505615 RAB2BQ8WUD1 216 aa4.34□□□□□ -1.71
VCAN-206ENST00000505615 C2orf50Q96LR7 162 aa4.34□□□□□ -1.71
VCAN-206ENST00000505615 Q9UF83 564 aa4.34□□□□□ -1.71
VCAN-206ENST00000505615 DISC1C4P0D8 188 aa4.33□□□□□ -1.72
VCAN-206ENST00000505615 M0QXV9 152 aa4.33□□□□□ -1.72
VCAN-206ENST00000505615 GNRH2O43555 120 aa4.33□□□□□ -1.72
VCAN-206ENST00000505615 AMTP48728 403 aa4.33□□□□□ -1.72
VCAN-206ENST00000505615 ZNF138P52744 262 aa4.33□□□□□ -1.72
VCAN-206ENST00000505615 LSM3P62310 102 aaKnown RBP4.33□□□□□ -1.72
VCAN-206ENST00000505615 ARL16Q0P5N6 197 aa4.33□□□□□ -1.72
VCAN-206ENST00000505615 ATP6V1FQ16864 119 aa4.33□□□□□ -1.72
VCAN-206ENST00000505615 SPINK6Q6UWN8 80 aa4.33□□□□□ -1.72
VCAN-206ENST00000505615 CYB561D1Q8N8Q1 229 aa4.33□□□□□ -1.72
VCAN-206ENST00000505615 C7orf33Q8WU49 177 aa4.33□□□□□ -1.72
VCAN-206ENST00000505615 MGST2Q99735 147 aa4.33□□□□□ -1.72
VCAN-206ENST00000505615 SOSTQ9BQB4 213 aa4.33□□□□□ -1.72
VCAN-206ENST00000505615 NAA50Q9GZZ1 169 aaKnown RBP4.33□□□□□ -1.72
VCAN-206ENST00000505615 NPVFQ9HCQ7 196 aa4.33□□□□□ -1.72
VCAN-206ENST00000505615 PPP1R2P9O14990 202 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 TYMSP04818 313 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 SEC11BP0C7V7 166 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 PYYP10082 97 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 HIST1H1EP10412 219 aaKnown RBP4.32□□□□□ -1.72
VCAN-206ENST00000505615 Q0VG73 95 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 GAGE5Q13069 117 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 RAB31Q13636 194 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 PDE6HQ13956 83 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 ENHOQ6UWT2 76 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 TMEM14EPQ6UXP3 125 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 IZUMO2Q6UXV1 221 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 MTURNQ8N3F0 131 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 OR10G9Q8NGN4 311 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 CHCHD7Q9BUK0 85 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 CCDC59Q9P031 241 aaKnown RBP4.32□□□□□ -1.72
VCAN-206ENST00000505615 TMEM14CQ9P0S9 112 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 VAX2Q9UIW0 290 aa4.32□□□□□ -1.72
VCAN-206ENST00000505615 A0A087WWC5 75 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 FAM25AB3EWG3 89 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 FAM25CB3EWG5 89 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 FAM25GB3EWG6 89 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 H3BMQ9 156 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 HLA-DQA1P01909 254 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 METTL15P1P0C7V9 234 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 AKAIN1P0CW23 69 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 MGST1P10620 155 aaKnown RBP4.31□□□□□ -1.72
VCAN-206ENST00000505615 INPP1P49441 399 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 CAV2P51636 162 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 CNBPP62633 177 aaKnown RBP4.31□□□□□ -1.72
VCAN-206ENST00000505615 SSBP1Q04837 148 aaKnown RBP4.31□□□□□ -1.72
VCAN-206ENST00000505615 NEDD8Q15843 81 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 COX19Q49B96 90 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 KRTAP26-1Q6PEX3 210 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 PRRT1Q99946 306 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 SH3BGRL3Q9H299 93 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 MCUBQ9NWR8 336 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 PSENENQ9NZ42 101 aa4.31□□□□□ -1.72
VCAN-206ENST00000505615 MUC21A0A0G2JKD1 596 aa4.3□□□□□ -1.72
VCAN-206ENST00000505615 ZNF876PQ49A33 203 aa4.3□□□□□ -1.72
VCAN-206ENST00000505615 MIC13Q5XKP0 118 aa4.3□□□□□ -1.72
VCAN-206ENST00000505615 CLVS1Q8IUQ0 354 aaPredicted RBP4.3□□□□□ -1.72
VCAN-206ENST00000505615 NEXN-AS1Q8NBZ9 246 aa4.3□□□□□ -1.72
VCAN-206ENST00000505615 SMIM4Q8WVI0 70 aa4.3□□□□□ -1.72
VCAN-206ENST00000505615 LINC00479Q96M42 142 aa4.3□□□□□ -1.72
VCAN-206ENST00000505615 SAMD10Q9BYL1 202 aa4.3□□□□□ -1.72
VCAN-206ENST00000505615 TIMM9Q9Y5J7 89 aa4.3□□□□□ -1.72
VCAN-206ENST00000505615 IGHV3-64A0A075B6Q5 118 aa4.29□□□□□ -1.72
VCAN-206ENST00000505615 PIGBOS1A0A0B4J2F0 54 aa4.29□□□□□ -1.72
VCAN-206ENST00000505615 RBAKDNA6NC62 111 aa4.29□□□□□ -1.72
VCAN-206ENST00000505615 H7C1H1 209 aa4.29□□□□□ -1.72
VCAN-206ENST00000505615 SSSCA1O60232 199 aa4.29□□□□□ -1.72
VCAN-206ENST00000505615 NCS1P62166 190 aa4.29□□□□□ -1.72
VCAN-206ENST00000505615 RPL24P83731 157 aaKnown RBP4.29□□□□□ -1.72
VCAN-206ENST00000505615 ELOBQ15370 118 aa4.29□□□□□ -1.72
VCAN-206ENST00000505615 ZNF506Q5JVG8 444 aa4.29□□□□□ -1.72
VCAN-206ENST00000505615 Q8N9P0 234 aaPredicted RBP4.29□□□□□ -1.72
VCAN-206ENST00000505615 SMIM8Q96KF7 97 aa4.29□□□□□ -1.72
VCAN-206ENST00000505615 C9orf85Q96MD7 179 aa4.29□□□□□ -1.72
VCAN-206ENST00000505615 C20orf85Q9H1P6 137 aa4.29□□□□□ -1.72
VCAN-206ENST00000505615 RAB26Q9ULW5 256 aa4.29□□□□□ -1.72
VCAN-206ENST00000505615 MUC17Q685J3 4493 aa4.29□□□□□ -1.72
VCAN-206ENST00000505615 A0A087WX48 190 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 ANKRD20A5PA0PJZ0 165 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 FAM231BA6NCW3 169 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 KRTAP10-6P60371 365 aaPredicted RBP4.28□□□□□ -1.72
VCAN-206ENST00000505615 MRPS10P82664 201 aaKnown RBP4.28□□□□□ -1.72
VCAN-206ENST00000505615 UFSP1Q6NVU6 142 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 C14orf178Q8N769 122 aaPredicted RBP4.28□□□□□ -1.72
VCAN-206ENST00000505615 GTSF1Q8WW33 167 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 PTH2Q96A98 100 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 PHYHIPLQ96FC7 376 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 DPH3Q96FX2 82 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 URB1-AS1Q96HZ7 61 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 FAM167A-AS1Q96KT0 104 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms