RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 CARHSP1Q9Y2V2 147 aaKnown RBP6.59□□□□□ -1.35
NEDD9-210ENST00000505589 TRBV6-4A0A1B0GX49 114 aa6.58□□□□□ -1.36
NEDD9-210ENST00000505589 NDUFB4O95168 129 aa6.58□□□□□ -1.36
NEDD9-210ENST00000505589 GATA1P15976 413 aaPredicted RBP6.58□□□□□ -1.36
NEDD9-210ENST00000505589 CEBPGP53567 150 aa6.58□□□□□ -1.36
NEDD9-210ENST00000505589 RHOHQ15669 191 aa6.58□□□□□ -1.36
NEDD9-210ENST00000505589 TMEM183BQ1AE95 376 aa6.58□□□□□ -1.36
NEDD9-210ENST00000505589 Q6AWC8 147 aa6.58□□□□□ -1.36
NEDD9-210ENST00000505589 TMEM183AQ8IXX5 376 aa6.58□□□□□ -1.36
NEDD9-210ENST00000505589 EXOC3-AS1Q8N2X6 119 aa6.58□□□□□ -1.36
NEDD9-210ENST00000505589 ATP6V0E2Q8NHE4 81 aa6.58□□□□□ -1.36
NEDD9-210ENST00000505589 CHAC1Q9BUX1 264 aa6.58□□□□□ -1.36
NEDD9-210ENST00000505589 GTSF1LQ9H1H1 148 aa6.58□□□□□ -1.36
NEDD9-210ENST00000505589 SCO2A0A1W2PP80 73 aa6.57□□□□□ -1.36
NEDD9-210ENST00000505589 FBLL1A6NHQ2 334 aaKnown RBP6.57□□□□□ -1.36
NEDD9-210ENST00000505589 RANP62826 216 aaKnown RBP6.57□□□□□ -1.36
NEDD9-210ENST00000505589 FAM74A3Q4VXF1 159 aa6.57□□□□□ -1.36
NEDD9-210ENST00000505589 MUC21Q5SSG8 566 aa6.57□□□□□ -1.36
NEDD9-210ENST00000505589 OTORQ9NRC9 128 aa6.57□□□□□ -1.36
NEDD9-210ENST00000505589 IGKV2-40A0A087WW87 121 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-210ENST00000505589 A0A087WWC5 75 aa6.56□□□□□ -1.36
NEDD9-210ENST00000505589 TRAV8-1A0A0A6YYK1 113 aa6.56□□□□□ -1.36
NEDD9-210ENST00000505589 TRAV21A0A0B4J279 112 aa6.56□□□□□ -1.36
NEDD9-210ENST00000505589 PEX7O00628 323 aa6.56□□□□□ -1.36
NEDD9-210ENST00000505589 IGKV2D-40P01614 121 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-210ENST00000505589 IGLV2-8P01709 118 aa6.56□□□□□ -1.36
NEDD9-210ENST00000505589 IGHV3-30P01768 117 aa6.56□□□□□ -1.36
NEDD9-210ENST00000505589 IGHV3-33P01772 117 aa6.56□□□□□ -1.36
NEDD9-210ENST00000505589 APOC3P02656 99 aa6.56□□□□□ -1.36
NEDD9-210ENST00000505589 IGHV3-30-3P0DP02 117 aa6.56□□□□□ -1.36
NEDD9-210ENST00000505589 IGHV3-30-5P0DP03 117 aa6.56□□□□□ -1.36
NEDD9-210ENST00000505589 SUMO1P63165 101 aaKnown RBP6.56□□□□□ -1.36
NEDD9-210ENST00000505589 SVBPQ8N300 66 aa6.56□□□□□ -1.36
NEDD9-210ENST00000505589 C5orf17Q8NAS9 161 aa6.56□□□□□ -1.36
NEDD9-210ENST00000505589 SMIM7Q9BQ49 75 aa6.56□□□□□ -1.36
NEDD9-210ENST00000505589 PARLQ9H300 379 aa6.56□□□□□ -1.36
NEDD9-210ENST00000505589 ZNF727A8MUV8 499 aa6.55□□□□□ -1.36
NEDD9-210ENST00000505589 DIRC3C9JPN6 131 aa6.55□□□□□ -1.36
NEDD9-210ENST00000505589 MGST1P10620 155 aaKnown RBP6.55□□□□□ -1.36
NEDD9-210ENST00000505589 ELOBQ15370 118 aa6.55□□□□□ -1.36
NEDD9-210ENST00000505589 ZNF674Q2M3X9 581 aa6.55□□□□□ -1.36
NEDD9-210ENST00000505589 C14orf177Q52M58 125 aa6.55□□□□□ -1.36
NEDD9-210ENST00000505589 SCXQ7RTU7 201 aa6.55□□□□□ -1.36
NEDD9-210ENST00000505589 ARL6IP6Q8N6S5 226 aa6.55□□□□□ -1.36
NEDD9-210ENST00000505589 HIST1H2BAQ96A08 127 aa6.55□□□□□ -1.36
NEDD9-210ENST00000505589 DERL1Q9BUN8 251 aa6.55□□□□□ -1.36
NEDD9-210ENST00000505589 SDF2L1Q9HCN8 221 aa6.55□□□□□ -1.36
NEDD9-210ENST00000505589 URGCP-MRPS24S4R325 110 aa6.55□□□□□ -1.36
NEDD9-210ENST00000505589 UBR4Q5T4S7 5183 aa6.55□□□□□ -1.36
NEDD9-210ENST00000505589 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-210ENST00000505589 PGPA6NDG6 321 aa6.54□□□□□ -1.36
NEDD9-210ENST00000505589 TCRAP04437 139 aa6.54□□□□□ -1.36
NEDD9-210ENST00000505589 AKR1C3P42330 323 aa6.54□□□□□ -1.36
NEDD9-210ENST00000505589 RPL35P42766 123 aaKnown RBP6.54□□□□□ -1.36
NEDD9-210ENST00000505589 GNG5P63218 68 aa6.54□□□□□ -1.36
NEDD9-210ENST00000505589 ZNF876PQ49A33 203 aa6.54□□□□□ -1.36
NEDD9-210ENST00000505589 PRR9Q5T870 116 aa6.54□□□□□ -1.36
NEDD9-210ENST00000505589 KCNIP4Q6PIL6 250 aa6.54□□□□□ -1.36
NEDD9-210ENST00000505589 SLC25A29Q8N8R3 303 aa6.54□□□□□ -1.36
NEDD9-210ENST00000505589 CMTM2Q8TAZ6 248 aa6.54□□□□□ -1.36
NEDD9-210ENST00000505589 TVP23CQ96ET8 276 aa6.54□□□□□ -1.36
NEDD9-210ENST00000505589 NAT8Q9UHE5 227 aa6.54□□□□□ -1.36
NEDD9-210ENST00000505589 EPDR1Q9UM22 224 aa6.54□□□□□ -1.36
NEDD9-210ENST00000505589 LRP1Q07954 4544 aaKnown RBP6.54□□□□□ -1.36
NEDD9-210ENST00000505589 LOC100131303A0A0U1RQF7 123 aa6.53□□□□□ -1.36
NEDD9-210ENST00000505589 SNAPINO95295 136 aa6.53□□□□□ -1.36
NEDD9-210ENST00000505589 IGLV2-11P01706 119 aa6.53□□□□□ -1.36
NEDD9-210ENST00000505589 PNRC1Q12796 327 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-210ENST00000505589 CENPWQ5EE01 88 aa6.53□□□□□ -1.36
NEDD9-210ENST00000505589 NAGKQ9UJ70 344 aa6.53□□□□□ -1.36
NEDD9-210ENST00000505589 RPH3ALQ9UNE2 315 aa6.53□□□□□ -1.36
NEDD9-210ENST00000505589 FAT3Q8TDW7 4589 aa6.53□□□□□ -1.36
NEDD9-210ENST00000505589 TRBV20OR9-2A0A075B6H5 130 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 IGHV3-16A0A0C4DH30 117 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 SERTM2A0A1B0GWG4 89 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 GNRH2O43555 120 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 S100A9P06702 114 aaKnown RBP6.52□□□□□ -1.37
NEDD9-210ENST00000505589 GNG4P50150 75 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 UBE2G1P62253 170 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 RHEBQ15382 184 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 TMEM241Q24JQ0 296 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 Q6ZQT7 251 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 GOLT1AQ6ZVE7 132 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 CLRN3Q8NCR9 226 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 CIRBP-AS1Q8TBR5 109 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 BAALCQ8WXS3 180 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 PTH2Q96A98 100 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 FMC1Q96HJ9 113 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 NDFIP1Q9BT67 221 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 HMCN2Q8NDA2 5059 aa6.52□□□□□ -1.37
NEDD9-210ENST00000505589 TRBV6-1A0A0K0K1D8 114 aa6.51□□□□□ -1.37
NEDD9-210ENST00000505589 K7EQM0 130 aa6.51□□□□□ -1.37
NEDD9-210ENST00000505589 M0R036 132 aa6.51□□□□□ -1.37
NEDD9-210ENST00000505589 RPL37AP61513 92 aaKnown RBP6.51□□□□□ -1.37
NEDD9-210ENST00000505589 RPL23P62829 140 aaKnown RBP6.51□□□□□ -1.37
NEDD9-210ENST00000505589 Q0VG73 95 aa6.51□□□□□ -1.37
NEDD9-210ENST00000505589 ADIRFQ15847 76 aa6.51□□□□□ -1.37
NEDD9-210ENST00000505589 CFAP126Q5VTH2 177 aa6.51□□□□□ -1.37
NEDD9-210ENST00000505589 Q86TA4 180 aa6.51□□□□□ -1.37
NEDD9-210ENST00000505589 LINC01551Q86U37 167 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms