RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 FAT3Q8TDW7 4589 aa-0.95□□□□□ -2.56
SMN2-205ENST00000505346 PCNX1Q96RV3 2341 aa-0.95□□□□□ -2.56
SMN2-205ENST00000505346 TCRBV3S1A0A5B6 114 aa-0.95□□□□□ -2.56
SMN2-205ENST00000505346 MAP1LC3B2A6NCE7 125 aa-0.95□□□□□ -2.56
SMN2-205ENST00000505346 IFNA21P01568 189 aa-0.95□□□□□ -2.56
SMN2-205ENST00000505346 SRP9P49458 86 aaKnown RBP-0.95□□□□□ -2.56
SMN2-205ENST00000505346 PCBD1P61457 104 aa-0.95□□□□□ -2.56
SMN2-205ENST00000505346 SSBP3-AS1Q7Z2R9 100 aa-0.95□□□□□ -2.56
SMN2-205ENST00000505346 STX12Q86Y82 276 aa-0.95□□□□□ -2.56
SMN2-205ENST00000505346 CYP4F30PQ9H0H9 118 aa-0.95□□□□□ -2.56
SMN2-205ENST00000505346 TMEM242Q9NWH2 141 aa-0.95□□□□□ -2.56
SMN2-205ENST00000505346 NDUFAF1Q9Y375 327 aa-0.95□□□□□ -2.56
SMN2-205ENST00000505346 CHD8Q9HCK8 2581 aa-0.95□□□□□ -2.56
SMN2-205ENST00000505346 MYO18BQ8IUG5 2567 aa-0.96□□□□□ -2.56
SMN2-205ENST00000505346 PHIPQ8WWQ0 1821 aa-0.96□□□□□ -2.56
SMN2-205ENST00000505346 LAMA3Q16787 3333 aa-0.96□□□□□ -2.56
SMN2-205ENST00000505346 PPRC1Q5VV67 1664 aaKnown RBP-0.96□□□□□ -2.56
SMN2-205ENST00000505346 ZNF815PA8K554 130 aa-0.96□□□□□ -2.56
SMN2-205ENST00000505346 SLC25A5P05141 298 aaKnown RBP-0.96□□□□□ -2.56
SMN2-205ENST00000505346 OR2T2Q6IF00 324 aa-0.96□□□□□ -2.56
SMN2-205ENST00000505346 C3orf33Q6P1S2 294 aa-0.96□□□□□ -2.56
SMN2-205ENST00000505346 Q6ZRX8 168 aa-0.96□□□□□ -2.56
SMN2-205ENST00000505346 STOML2Q9UJZ1 356 aa-0.96□□□□□ -2.56
SMN2-205ENST00000505346 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.97□□□□□ -2.56
SMN2-205ENST00000505346 PLCE1Q9P212 2302 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 COL6A5A8TX70 2615 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 A2MP01023 1474 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 TRBV7-1A0A0A6YYK4 115 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 RBAKDNA6NC62 111 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 M0R3E3 92 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 ACYP2P14621 99 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 CCL3L1P16619 93 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 RPL7P18124 248 aaKnown RBP-0.97□□□□□ -2.56
SMN2-205ENST00000505346 AKR1D1P51857 326 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 SPAG11BQ08648 103 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 WFDC2Q14508 124 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 KRTAP20-1Q3LI63 56 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 TMEM78Q5T7P6 136 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 PPDPFLQ8WWR9 84 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 PRO0255Q9UI72 69 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 KDM5CP41229 1560 aa-0.97□□□□□ -2.56
SMN2-205ENST00000505346 NBEAL2Q6ZNJ1 2754 aa-0.97□□□□□ -2.57
SMN2-205ENST00000505346 NBPF19A0A087WUL8 3843 aa-0.98□□□□□ -2.57
SMN2-205ENST00000505346 PTPRMP28827 1452 aa-0.98□□□□□ -2.57
SMN2-205ENST00000505346 CNOT1A5YKK6 2376 aaKnown RBP-0.98□□□□□ -2.57
SMN2-205ENST00000505346 SPTBN1Q01082 2364 aaKnown RBP-0.98□□□□□ -2.57
SMN2-205ENST00000505346 LAMA1P25391 3075 aa-0.98□□□□□ -2.57
SMN2-205ENST00000505346 A0A1W2PRE2 83 aa-0.98□□□□□ -2.57
SMN2-205ENST00000505346 TCRAP04437 139 aa-0.98□□□□□ -2.57
SMN2-205ENST00000505346 RPL22P35268 128 aaKnown RBP-0.98□□□□□ -2.57
SMN2-205ENST00000505346 POLR2HP52434 150 aaKnown RBP-0.98□□□□□ -2.57
SMN2-205ENST00000505346 NPC2P61916 151 aa-0.98□□□□□ -2.57
SMN2-205ENST00000505346 LSM3P62310 102 aaKnown RBP-0.98□□□□□ -2.57
SMN2-205ENST00000505346 CYP2G1PQ6ZSU1 146 aa-0.98□□□□□ -2.57
SMN2-205ENST00000505346 SLC25A26Q70HW3 274 aa-0.98□□□□□ -2.57
SMN2-205ENST00000505346 C4orf33Q8N1A6 199 aa-0.98□□□□□ -2.57
SMN2-205ENST00000505346 THEM6Q8WUY1 208 aa-0.98□□□□□ -2.57
SMN2-205ENST00000505346 CCDC32Q9BV29 185 aa-0.98□□□□□ -2.57
SMN2-205ENST00000505346 GID8Q9NWU2 228 aa-0.98□□□□□ -2.57
SMN2-205ENST00000505346 CSPG4Q6UVK1 2322 aa-0.98□□□□□ -2.57
SMN2-205ENST00000505346 ARHGAP31Q2M1Z3 1444 aa-0.98□□□□□ -2.57
SMN2-205ENST00000505346 MGAM2Q2M2H8 2515 aa-0.98□□□□□ -2.57
SMN2-205ENST00000505346 ARFGEF1Q9Y6D6 1849 aa-0.99□□□□□ -2.57
SMN2-205ENST00000505346 GOLGA3Q08378 1498 aa-0.99□□□□□ -2.57
SMN2-205ENST00000505346 UQCRQO14949 82 aa-0.99□□□□□ -2.57
SMN2-205ENST00000505346 SLC25A6P12236 298 aa-0.99□□□□□ -2.57
SMN2-205ENST00000505346 GCHFRP30047 84 aa-0.99□□□□□ -2.57
SMN2-205ENST00000505346 KLK9Q2XQG4 91 aa-0.99□□□□□ -2.57
SMN2-205ENST00000505346 FAM74A4Q5TZK3 123 aa-0.99□□□□□ -2.57
SMN2-205ENST00000505346 UBE2DNLQ8IWF7 75 aa-0.99□□□□□ -2.57
SMN2-205ENST00000505346 IFI27L1Q96BM0 104 aa-0.99□□□□□ -2.57
SMN2-205ENST00000505346 METTL1Q9UBP6 276 aaKnown RBP-0.99□□□□□ -2.57
SMN2-205ENST00000505346 PKHD1P08F94 4074 aa-0.99□□□□□ -2.57
SMN2-205ENST00000505346 AKAP13Q12802 2813 aa-0.99□□□□□ -2.57
SMN2-205ENST00000505346 URB1O60287 2271 aaKnown RBP-1□□□□□ -2.57
SMN2-205ENST00000505346 TRGV1A0A0A0MS02 117 aa-1□□□□□ -2.57
SMN2-205ENST00000505346 PNMA8CA0A1B0GUJ8 204 aa-1□□□□□ -2.57
SMN2-205ENST00000505346 A0A1B0GW64 132 aa-1□□□□□ -2.57
SMN2-205ENST00000505346 C20orf197Q8N268 126 aa-1□□□□□ -2.57
SMN2-205ENST00000505346 BOLA2Q9H3K6 86 aa-1□□□□□ -2.57
SMN2-205ENST00000505346 KIAA0100Q14667 2235 aaKnown RBP-1□□□□□ -2.57
SMN2-205ENST00000505346 NRXN2Q9P2S2 1712 aa-1.01□□□□□ -2.57
SMN2-205ENST00000505346 ATRQ13535 2644 aa-1.01□□□□□ -2.57
SMN2-205ENST00000505346 TMEM14DPA8MWL7 114 aa-1.01□□□□□ -2.57
SMN2-205ENST00000505346 TMEM238C9JI98 176 aa-1.01□□□□□ -2.57
SMN2-205ENST00000505346 G3V318 75 aa-1.01□□□□□ -2.57
SMN2-205ENST00000505346 SPRR2EP22531 72 aa-1.01□□□□□ -2.57
SMN2-205ENST00000505346 PLGLB1Q02325 96 aa-1.01□□□□□ -2.57
SMN2-205ENST00000505346 OR8B8Q15620 311 aa-1.01□□□□□ -2.57
SMN2-205ENST00000505346 HSD17B12Q53GQ0 312 aa-1.01□□□□□ -2.57
SMN2-205ENST00000505346 COX7B2Q8TF08 81 aa-1.01□□□□□ -2.57
SMN2-205ENST00000505346 VPS25Q9BRG1 176 aa-1.01□□□□□ -2.57
SMN2-205ENST00000505346 SLC35B3Q9H1N7 401 aa-1.01□□□□□ -2.57
SMN2-205ENST00000505346 CCDC171Q6TFL3 1326 aa-1.01□□□□□ -2.57
SMN2-205ENST00000505346 PARP14Q460N5 1801 aa-1.01□□□□□ -2.57
SMN2-205ENST00000505346 SSBP1Q04837 148 aaKnown RBP-1.02□□□□□ -2.57
SMN2-205ENST00000505346 INSL4Q14641 139 aa-1.02□□□□□ -2.57
SMN2-205ENST00000505346 Q5VSD8 79 aa-1.02□□□□□ -2.57
SMN2-205ENST00000505346 SLC48A1Q6P1K1 146 aa-1.02□□□□□ -2.57
SMN2-205ENST00000505346 XIRP1Q702N8 1843 aaKnown RBP-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms