RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 V9GYV3 84 aa8.71□□□□□ -1.02
SNCA-208ENST00000505199 IGHV3-53P01767 116 aa8.7□□□□□ -1.02
SNCA-208ENST00000505199 CRYGDP07320 174 aa8.7□□□□□ -1.02
SNCA-208ENST00000505199 SMIM17P0DL12 118 aa8.7□□□□□ -1.02
SNCA-208ENST00000505199 RAB4BP61018 213 aa8.7□□□□□ -1.02
SNCA-208ENST00000505199 LYZL1Q6UWQ5 148 aa8.7□□□□□ -1.02
SNCA-208ENST00000505199 COMMD7Q86VX2 200 aa8.7□□□□□ -1.02
SNCA-208ENST00000505199 GTSF1Q8WW33 167 aa8.7□□□□□ -1.02
SNCA-208ENST00000505199 BORCS7Q96B45 105 aa8.7□□□□□ -1.02
SNCA-208ENST00000505199 ANAPC16Q96DE5 110 aa8.7□□□□□ -1.02
SNCA-208ENST00000505199 NAT8BQ9UHF3 227 aa8.7□□□□□ -1.02
SNCA-208ENST00000505199 ICOSQ9Y6W8 199 aa8.7□□□□□ -1.02
SNCA-208ENST00000505199 HIGD1CA8MV81 97 aa8.69□□□□□ -1.02
SNCA-208ENST00000505199 GZMBP10144 247 aa8.69□□□□□ -1.02
SNCA-208ENST00000505199 CCL18P55774 89 aa8.69□□□□□ -1.02
SNCA-208ENST00000505199 TIRAPP58753 221 aa8.69□□□□□ -1.02
SNCA-208ENST00000505199 SLC25A29Q8N8R3 303 aa8.69□□□□□ -1.02
SNCA-208ENST00000505199 A0A096LPF7 62 aa8.68□□□□□ -1.02
SNCA-208ENST00000505199 A0A1B0GUT8 65 aa8.68□□□□□ -1.02
SNCA-208ENST00000505199 A0A1B0GW15 77 aa8.68□□□□□ -1.02
SNCA-208ENST00000505199 SMIM27A0A1W2PRY6 76 aa8.68□□□□□ -1.02
SNCA-208ENST00000505199 MT-ND4LP03901 98 aa8.68□□□□□ -1.02
SNCA-208ENST00000505199 NTF3P20783 257 aa8.68□□□□□ -1.02
SNCA-208ENST00000505199 C10orf91Q5T1B1 145 aa8.68□□□□□ -1.02
SNCA-208ENST00000505199 SMIM15Q7Z3B0 74 aa8.68□□□□□ -1.02
SNCA-208ENST00000505199 NEGR1Q7Z3B1 354 aa8.68□□□□□ -1.02
SNCA-208ENST00000505199 TPPP3Q9BW30 176 aa8.68□□□□□ -1.02
SNCA-208ENST00000505199 KIF25-AS1Q9Y6Z4 181 aa8.68□□□□□ -1.02
SNCA-208ENST00000505199 STARD9Q9P2P6 4700 aa8.68□□□□□ -1.02
SNCA-208ENST00000505199 F8W036 122 aa8.67□□□□□ -1.02
SNCA-208ENST00000505199 H7C1H1 209 aa8.67□□□□□ -1.02
SNCA-208ENST00000505199 K7EQD1 137 aa8.67□□□□□ -1.02
SNCA-208ENST00000505199 NUDT3O95989 172 aa8.67□□□□□ -1.02
SNCA-208ENST00000505199 SRIP30626 198 aa8.67□□□□□ -1.02
SNCA-208ENST00000505199 FAM74A4Q5TZK3 123 aa8.67□□□□□ -1.02
SNCA-208ENST00000505199 IMMP2LQ96T52 175 aa8.67□□□□□ -1.02
SNCA-208ENST00000505199 UPK3BQ9BT76 320 aa8.67□□□□□ -1.02
SNCA-208ENST00000505199 DPH3P1Q9H4G8 78 aa8.67□□□□□ -1.02
SNCA-208ENST00000505199 CARHSP1Q9Y2V2 147 aaKnown RBP8.67□□□□□ -1.02
SNCA-208ENST00000505199 A0A0J9YY99 117 aa8.66□□□□□ -1.02
SNCA-208ENST00000505199 K7EP13 123 aa8.66□□□□□ -1.02
SNCA-208ENST00000505199 GYPEP15421 78 aa8.66□□□□□ -1.02
SNCA-208ENST00000505199 TWIST1Q15672 202 aa8.66□□□□□ -1.02
SNCA-208ENST00000505199 SAMD10Q9BYL1 202 aa8.66□□□□□ -1.02
SNCA-208ENST00000505199 CTDSP1Q9GZU7 261 aa8.66□□□□□ -1.02
SNCA-208ENST00000505199 JPT2Q9H910 190 aa8.66□□□□□ -1.02
SNCA-208ENST00000505199 TMEM242Q9NWH2 141 aa8.66□□□□□ -1.02
SNCA-208ENST00000505199 A0A087WWL8 130 aa8.65□□□□□ -1.02
SNCA-208ENST00000505199 S100A8P05109 93 aa8.65□□□□□ -1.02
SNCA-208ENST00000505199 ADCYAP1P18509 176 aa8.65□□□□□ -1.02
SNCA-208ENST00000505199 LINC00315P59091 139 aa8.65□□□□□ -1.02
SNCA-208ENST00000505199 RIGQ13278 110 aa8.65□□□□□ -1.02
SNCA-208ENST00000505199 C14orf178Q8N769 122 aaPredicted RBP8.65□□□□□ -1.02
SNCA-208ENST00000505199 NUP35Q8NFH5 326 aa8.65□□□□□ -1.02
SNCA-208ENST00000505199 LINC00694P0DN24 101 aa8.64□□□□□ -1.03
SNCA-208ENST00000505199 NDUFA5Q16718 116 aa8.64□□□□□ -1.03
SNCA-208ENST00000505199 ATP5L2Q7Z4Y8 100 aa8.64□□□□□ -1.03
SNCA-208ENST00000505199 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.64□□□□□ -1.03
SNCA-208ENST00000505199 DNAJC30Q96LL9 226 aa8.64□□□□□ -1.03
SNCA-208ENST00000505199 TMEM191AQ9H0A3 160 aa8.64□□□□□ -1.03
SNCA-208ENST00000505199 TRBV7-3A0A075B6L6 115 aa8.63□□□□□ -1.03
SNCA-208ENST00000505199 TRAV9-1A0A075B6T8 112 aa8.63□□□□□ -1.03
SNCA-208ENST00000505199 A0A087WWC5 75 aa8.63□□□□□ -1.03
SNCA-208ENST00000505199 LY6G6CO95867 125 aa8.63□□□□□ -1.03
SNCA-208ENST00000505199 EVI2AP22794 236 aa8.63□□□□□ -1.03
SNCA-208ENST00000505199 RPL36AP83881 106 aaKnown RBP8.63□□□□□ -1.03
SNCA-208ENST00000505199 RHEBQ15382 184 aa8.63□□□□□ -1.03
SNCA-208ENST00000505199 ZNF56Q15929 161 aa8.63□□□□□ -1.03
SNCA-208ENST00000505199 RPL36ALQ969Q0 106 aaKnown RBP8.63□□□□□ -1.03
SNCA-208ENST00000505199 PGLYRP4Q96LB8 373 aa8.63□□□□□ -1.03
SNCA-208ENST00000505199 MSRB1Q9NZV6 116 aa8.63□□□□□ -1.03
SNCA-208ENST00000505199 MRPS16Q9Y3D3 137 aaKnown RBP8.63□□□□□ -1.03
SNCA-208ENST00000505199 DYNC2H1Q8NCM8 4307 aaKnown RBP8.63□□□□□ -1.03
SNCA-208ENST00000505199 IGHV3-73A0A0B4J1V6 119 aa8.62□□□□□ -1.03
SNCA-208ENST00000505199 M0QY20 66 aa8.62□□□□□ -1.03
SNCA-208ENST00000505199 BTF3P20290 206 aaKnown RBP8.62□□□□□ -1.03
SNCA-208ENST00000505199 TMEM97Q5BJF2 176 aa8.62□□□□□ -1.03
SNCA-208ENST00000505199 RASL11AQ6T310 242 aa8.62□□□□□ -1.03
SNCA-208ENST00000505199 UBE2DNLQ8IWF7 75 aa8.62□□□□□ -1.03
SNCA-208ENST00000505199 MUC21A0A0G2JKD1 596 aa8.61□□□□□ -1.03
SNCA-208ENST00000505199 MUC21A0A140T8X8 626 aa8.61□□□□□ -1.03
SNCA-208ENST00000505199 F5H697 171 aa8.61□□□□□ -1.03
SNCA-208ENST00000505199 PPP1R17O96001 155 aa8.61□□□□□ -1.03
SNCA-208ENST00000505199 ESRGQ1W209 222 aa8.61□□□□□ -1.03
SNCA-208ENST00000505199 LYPD5Q6UWN5 251 aa8.61□□□□□ -1.03
SNCA-208ENST00000505199 Q6ZSN1 163 aa8.61□□□□□ -1.03
SNCA-208ENST00000505199 DAZ4Q86SG3 579 aaKnown RBP8.61□□□□□ -1.03
SNCA-208ENST00000505199 SVBPQ8N300 66 aa8.61□□□□□ -1.03
SNCA-208ENST00000505199 GATD1Q8NB37 220 aa8.61□□□□□ -1.03
SNCA-208ENST00000505199 ATP6V0E2Q8NHE4 81 aa8.61□□□□□ -1.03
SNCA-208ENST00000505199 GTSF1LQ9H1H1 148 aa8.61□□□□□ -1.03
SNCA-208ENST00000505199 DAZ3Q9NR90 486 aaKnown RBP8.61□□□□□ -1.03
SNCA-208ENST00000505199 LINC00588Q9Y4M8 146 aa8.61□□□□□ -1.03
SNCA-208ENST00000505199 HBBP68871 147 aa8.6□□□□□ -1.03
SNCA-208ENST00000505199 KCNIP4Q6PIL6 250 aa8.6□□□□□ -1.03
SNCA-208ENST00000505199 ZNRF2Q8NHG8 242 aa8.6□□□□□ -1.03
SNCA-208ENST00000505199 LYSTQ99698 3801 aa8.6□□□□□ -1.03
SNCA-208ENST00000505199 A0A1B0GXF2 115 aa8.59□□□□□ -1.03
SNCA-208ENST00000505199 SNAPINO95295 136 aa8.59□□□□□ -1.03
SNCA-208ENST00000505199 UBE2D3P61077 147 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms