RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 C14orf178Q8N769 122 aaPredicted RBP3.83□□□□□ -1.8
GYPB-204ENST00000504951 OR2T35Q8NGX2 323 aa3.83□□□□□ -1.8
GYPB-204ENST00000504951 KCNS1Q96KK3 526 aa3.83□□□□□ -1.8
GYPB-204ENST00000504951 PRADC1Q9BSG0 188 aa3.83□□□□□ -1.8
GYPB-204ENST00000504951 PARLQ9H300 379 aa3.83□□□□□ -1.8
GYPB-204ENST00000504951 MUC2Q02817 5179 aa3.83□□□□□ -1.8
GYPB-204ENST00000504951 MGST1P10620 155 aaKnown RBP3.82□□□□□ -1.8
GYPB-204ENST00000504951 RPL12P30050 165 aaKnown RBP3.82□□□□□ -1.8
GYPB-204ENST00000504951 RPL19P84098 196 aaKnown RBP3.82□□□□□ -1.8
GYPB-204ENST00000504951 Q0VG73 95 aa3.82□□□□□ -1.8
GYPB-204ENST00000504951 ELOBQ15370 118 aa3.82□□□□□ -1.8
GYPB-204ENST00000504951 PIK3CD-AS1Q5SR53 167 aa3.82□□□□□ -1.8
GYPB-204ENST00000504951 UFSP1Q6NVU6 142 aa3.82□□□□□ -1.8
GYPB-204ENST00000504951 MZT2BQ6NZ67 158 aa3.82□□□□□ -1.8
GYPB-204ENST00000504951 PQLC2Q6ZP29 291 aa3.82□□□□□ -1.8
GYPB-204ENST00000504951 SDIM1Q6ZPB5 146 aa3.82□□□□□ -1.8
GYPB-204ENST00000504951 PRNTQ86SH4 94 aa3.82□□□□□ -1.8
GYPB-204ENST00000504951 ENKURQ8TC29 256 aa3.82□□□□□ -1.8
GYPB-204ENST00000504951 SCGB1C1Q8TD33 95 aa3.82□□□□□ -1.8
GYPB-204ENST00000504951 LINC00479Q96M42 142 aa3.82□□□□□ -1.8
GYPB-204ENST00000504951 DPH3P1Q9H4G8 78 aa3.82□□□□□ -1.8
GYPB-204ENST00000504951 PSG8Q9UQ74 426 aa3.82□□□□□ -1.8
GYPB-204ENST00000504951 TRAV34A0A0B4J273 112 aa3.81□□□□□ -1.8
GYPB-204ENST00000504951 A0A1W2PPV4 95 aa3.81□□□□□ -1.8
GYPB-204ENST00000504951 INMT-MINDY4F8WBC2 141 aa3.81□□□□□ -1.8
GYPB-204ENST00000504951 TAAR5O14804 337 aa3.81□□□□□ -1.8
GYPB-204ENST00000504951 STAG3L2P0CL84 134 aa3.81□□□□□ -1.8
GYPB-204ENST00000504951 STAG3L3P0CL85 134 aa3.81□□□□□ -1.8
GYPB-204ENST00000504951 SUMO1P63165 101 aaKnown RBP3.81□□□□□ -1.8
GYPB-204ENST00000504951 CYCSP99999 105 aaKnown RBP3.81□□□□□ -1.8
GYPB-204ENST00000504951 FLI1Q01543 452 aaPredicted RBP3.81□□□□□ -1.8
GYPB-204ENST00000504951 FAM74A1Q5RGS3 127 aa3.81□□□□□ -1.8
GYPB-204ENST00000504951 ARL6IP6Q8N6S5 226 aa3.81□□□□□ -1.8
GYPB-204ENST00000504951 C5orf17Q8NAS9 161 aa3.81□□□□□ -1.8
GYPB-204ENST00000504951 OR10G7Q8NGN6 311 aa3.81□□□□□ -1.8
GYPB-204ENST00000504951 SUN5Q8TC36 379 aa3.81□□□□□ -1.8
GYPB-204ENST00000504951 RAB24Q969Q5 203 aa3.81□□□□□ -1.8
GYPB-204ENST00000504951 EPDR1Q9UM22 224 aa3.81□□□□□ -1.8
GYPB-204ENST00000504951 LPAP08519 4548 aa3.8□□□□□ -1.8
GYPB-204ENST00000504951 IGKV2D-24A0A075B6R9 120 aa3.8□□□□□ -1.8
GYPB-204ENST00000504951 H3BVH4 76 aa3.8□□□□□ -1.8
GYPB-204ENST00000504951 UPK1BO75841 260 aa3.8□□□□□ -1.8
GYPB-204ENST00000504951 GCHFRP30047 84 aa3.8□□□□□ -1.8
GYPB-204ENST00000504951 CDC34P49427 236 aaPredicted RBP3.8□□□□□ -1.8
GYPB-204ENST00000504951 CRIP1P50238 77 aa3.8□□□□□ -1.8
GYPB-204ENST00000504951 LGALSLQ3ZCW2 172 aaPredicted RBP3.8□□□□□ -1.8
GYPB-204ENST00000504951 SMUG1Q53HV7 270 aa3.8□□□□□ -1.8
GYPB-204ENST00000504951 WDR73Q6P4I2 378 aa3.8□□□□□ -1.8
GYPB-204ENST00000504951 ZFP2Q6ZN57 461 aa3.8□□□□□ -1.8
GYPB-204ENST00000504951 NIT1Q86X76 327 aa3.8□□□□□ -1.8
GYPB-204ENST00000504951 CYB561D1Q8N8Q1 229 aa3.8□□□□□ -1.8
GYPB-204ENST00000504951 MARVELD1Q9BSK0 173 aa3.8□□□□□ -1.8
GYPB-204ENST00000504951 NDFIP1Q9BT67 221 aa3.8□□□□□ -1.8
GYPB-204ENST00000504951 KLK12Q9UKR0 248 aa3.8□□□□□ -1.8
GYPB-204ENST00000504951 A0A087WWL8 130 aa3.79□□□□□ -1.8
GYPB-204ENST00000504951 A8MWV9 139 aa3.79□□□□□ -1.8
GYPB-204ENST00000504951 PANO1I0J062 215 aa3.79□□□□□ -1.8
GYPB-204ENST00000504951 SSNA1O43805 119 aa3.79□□□□□ -1.8
GYPB-204ENST00000504951 ATP6V0CP27449 155 aa3.79□□□□□ -1.8
GYPB-204ENST00000504951 FGF8P55075 233 aaPredicted RBP3.79□□□□□ -1.8
GYPB-204ENST00000504951 CNBPP62633 177 aaKnown RBP3.79□□□□□ -1.8
GYPB-204ENST00000504951 REG3GQ6UW15 175 aa3.79□□□□□ -1.8
GYPB-204ENST00000504951 SPINK6Q6UWN8 80 aa3.79□□□□□ -1.8
GYPB-204ENST00000504951 CLRN3Q8NCR9 226 aa3.79□□□□□ -1.8
GYPB-204ENST00000504951 UBE2WQ96B02 151 aa3.79□□□□□ -1.8
GYPB-204ENST00000504951 PLAC8Q9NZF1 115 aa3.79□□□□□ -1.8
GYPB-204ENST00000504951 ARL2-SNX15V9GYD0 113 aa3.79□□□□□ -1.8
GYPB-204ENST00000504951 FAT4Q6V0I7 4981 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 SERTM2A0A1B0GWG4 89 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 GRIFINA4D1Z8 144 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 KRBOX1C9JBD0 128 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 M0R036 132 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 PRSS1P07477 247 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 ARMS2P0C7Q2 107 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 PET100P0DJ07 73 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 SRSF9Q13242 221 aaKnown RBP eCLIP3.78□□□□□ -1.8
GYPB-204ENST00000504951 ZNF726P1Q15940 193 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 ZFP69Q49AA0 526 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 Q5BKY6 102 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 SAPCD1Q5SSQ6 148 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 FAM74A4Q5TZK3 123 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 ENHOQ6UWT2 76 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 LINC00299Q6ZSB3 139 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 Q86TA4 180 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 OR2G3Q8NGZ4 309 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 S100ZQ8WXG8 99 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 ZC2HC1AQ96GY0 325 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 IL36BQ9NZH7 164 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 NDUFA13Q9P0J0 144 aa3.78□□□□□ -1.8
GYPB-204ENST00000504951 TMSB15BA0A087X1C1 80 aa3.77□□□□□ -1.81
GYPB-204ENST00000504951 FABP5P3A8MUU1 101 aa3.77□□□□□ -1.81
GYPB-204ENST00000504951 B4DEV8 164 aa3.77□□□□□ -1.81
GYPB-204ENST00000504951 K7EQM0 130 aa3.77□□□□□ -1.81
GYPB-204ENST00000504951 SH2D1AO60880 128 aa3.77□□□□□ -1.81
GYPB-204ENST00000504951 CXorf1O96002 111 aa3.77□□□□□ -1.81
GYPB-204ENST00000504951 S100A4P26447 101 aaKnown RBP3.77□□□□□ -1.81
GYPB-204ENST00000504951 UBE2G2P60604 165 aa3.77□□□□□ -1.81
GYPB-204ENST00000504951 UBE2D3P61077 147 aa3.77□□□□□ -1.81
GYPB-204ENST00000504951 UBE2D2P62837 147 aa3.77□□□□□ -1.81
GYPB-204ENST00000504951 ODF1Q14990 250 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms