RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 EREGO14944 169 aa8.71□□□□□ -1.02
DDX41-204ENST00000504807 PAGE4O60829 102 aa8.71□□□□□ -1.02
DDX41-204ENST00000504807 S100A4P26447 101 aaKnown RBP8.71□□□□□ -1.02
DDX41-204ENST00000504807 RPL19P84098 196 aaKnown RBP8.71□□□□□ -1.02
DDX41-204ENST00000504807 C10orf126Q8N4M7 172 aa8.71□□□□□ -1.02
DDX41-204ENST00000504807 KCNRGQ8N5I3 272 aa8.71□□□□□ -1.02
DDX41-204ENST00000504807 TRAV8-6A0A0B4J262 113 aa8.7□□□□□ -1.02
DDX41-204ENST00000504807 TRBV6-1A0A0K0K1D8 114 aa8.7□□□□□ -1.02
DDX41-204ENST00000504807 A8MWV9 139 aa8.7□□□□□ -1.02
DDX41-204ENST00000504807 CIDEAO60543 219 aa8.7□□□□□ -1.02
DDX41-204ENST00000504807 GCSHP23434 173 aa8.7□□□□□ -1.02
DDX41-204ENST00000504807 LINC01559Q495D7 138 aa8.7□□□□□ -1.02
DDX41-204ENST00000504807 PIK3CD-AS1Q5SR53 167 aa8.7□□□□□ -1.02
DDX41-204ENST00000504807 Q8N814 137 aa8.7□□□□□ -1.02
DDX41-204ENST00000504807 FMC1Q96HJ9 113 aa8.7□□□□□ -1.02
DDX41-204ENST00000504807 SCO2A0A1W2PP80 73 aa8.69□□□□□ -1.02
DDX41-204ENST00000504807 LECT2O14960 151 aa8.69□□□□□ -1.02
DDX41-204ENST00000504807 FAM162BQ5T6X4 162 aa8.69□□□□□ -1.02
DDX41-204ENST00000504807 FAM74A4Q5TZK3 123 aa8.69□□□□□ -1.02
DDX41-204ENST00000504807 CST9LP1Q5W188 147 aa8.69□□□□□ -1.02
DDX41-204ENST00000504807 FAM213BQ8TBF2 198 aa8.69□□□□□ -1.02
DDX41-204ENST00000504807 SFRP2Q96HF1 295 aa8.69□□□□□ -1.02
DDX41-204ENST00000504807 ZFP30Q9Y2G7 519 aa8.69□□□□□ -1.02
DDX41-204ENST00000504807 FAT3Q8TDW7 4589 aa8.68□□□□□ -1.02
DDX41-204ENST00000504807 LRP2P98164 4655 aa8.68□□□□□ -1.02
DDX41-204ENST00000504807 IGLV5-52A0A0A0MRZ9 124 aa8.68□□□□□ -1.02
DDX41-204ENST00000504807 M0R381 172 aa8.68□□□□□ -1.02
DDX41-204ENST00000504807 PSCAO43653 123 aa8.68□□□□□ -1.02
DDX41-204ENST00000504807 CCL20P78556 96 aa8.68□□□□□ -1.02
DDX41-204ENST00000504807 MBD3L1Q8WWY6 194 aa8.68□□□□□ -1.02
DDX41-204ENST00000504807 MLST8Q9BVC4 326 aa8.68□□□□□ -1.02
DDX41-204ENST00000504807 MUC21A0A0G2JKD1 596 aa8.67□□□□□ -1.02
DDX41-204ENST00000504807 MUC21A0A140T8X8 626 aa8.67□□□□□ -1.02
DDX41-204ENST00000504807 AKR1C3P42330 323 aa8.67□□□□□ -1.02
DDX41-204ENST00000504807 UBE2G1P62253 170 aa8.67□□□□□ -1.02
DDX41-204ENST00000504807 ZNF345Q14585 488 aa8.67□□□□□ -1.02
DDX41-204ENST00000504807 OR10AG1Q8NH19 301 aa8.67□□□□□ -1.02
DDX41-204ENST00000504807 SFT2D1Q8WV19 159 aa8.67□□□□□ -1.02
DDX41-204ENST00000504807 NKX6-2Q9C056 277 aaPredicted RBP8.67□□□□□ -1.02
DDX41-204ENST00000504807 SEC11BP0C7V7 166 aa8.66□□□□□ -1.02
DDX41-204ENST00000504807 LINC01620Q4KN68 170 aa8.66□□□□□ -1.02
DDX41-204ENST00000504807 DERL1Q9BUN8 251 aa8.66□□□□□ -1.02
DDX41-204ENST00000504807 BCL2L11O43521 198 aa8.65□□□□□ -1.02
DDX41-204ENST00000504807 LAGE3Q14657 143 aa8.65□□□□□ -1.02
DDX41-204ENST00000504807 NIT1Q86X76 327 aa8.65□□□□□ -1.02
DDX41-204ENST00000504807 PHLDA3Q9Y5J5 127 aa8.65□□□□□ -1.02
DDX41-204ENST00000504807 HMSDA8MTL9 139 aa8.64□□□□□ -1.03
DDX41-204ENST00000504807 TPT1P13693 172 aaKnown RBP8.64□□□□□ -1.03
DDX41-204ENST00000504807 UBE2D3P61077 147 aa8.64□□□□□ -1.03
DDX41-204ENST00000504807 UBE2D2P62837 147 aa8.64□□□□□ -1.03
DDX41-204ENST00000504807 DEFB104AQ8WTQ1 72 aa8.64□□□□□ -1.03
DDX41-204ENST00000504807 NTN5Q8WTR8 489 aaPredicted RBP8.64□□□□□ -1.03
DDX41-204ENST00000504807 BAALCQ8WXS3 180 aa8.64□□□□□ -1.03
DDX41-204ENST00000504807 ZNF471Q9BX82 626 aaPredicted RBP8.64□□□□□ -1.03
DDX41-204ENST00000504807 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.63□□□□□ -1.03
DDX41-204ENST00000504807 RHODO00212 210 aa8.63□□□□□ -1.03
DDX41-204ENST00000504807 STOML3Q8TAV4 291 aa8.63□□□□□ -1.03
DDX41-204ENST00000504807 TCEAL7Q9BRU2 100 aa8.63□□□□□ -1.03
DDX41-204ENST00000504807 SNAI2O43623 268 aa8.62□□□□□ -1.03
DDX41-204ENST00000504807 IGLV2-8P01709 118 aa8.62□□□□□ -1.03
DDX41-204ENST00000504807 PLA2G1BP04054 148 aaKnown RBP8.62□□□□□ -1.03
DDX41-204ENST00000504807 PRR27Q6MZM9 219 aa8.62□□□□□ -1.03
DDX41-204ENST00000504807 Q6ZSA8 131 aa8.62□□□□□ -1.03
DDX41-204ENST00000504807 TMUB2Q71RG4 321 aa8.62□□□□□ -1.03
DDX41-204ENST00000504807 BAGE2Q86Y30 109 aa8.62□□□□□ -1.03
DDX41-204ENST00000504807 ZFP82Q8N141 532 aa8.62□□□□□ -1.03
DDX41-204ENST00000504807 NEXN-AS1Q8NBZ9 246 aa8.62□□□□□ -1.03
DDX41-204ENST00000504807 TMEM70Q9BUB7 260 aa8.62□□□□□ -1.03
DDX41-204ENST00000504807 SSBP4Q9BWG4 385 aaPredicted RBP8.62□□□□□ -1.03
DDX41-204ENST00000504807 KLK12Q9UKR0 248 aa8.62□□□□□ -1.03
DDX41-204ENST00000504807 KIF25-AS1Q9Y6Z4 181 aa8.62□□□□□ -1.03
DDX41-204ENST00000504807 UMAD1C9J7I0 102 aa8.61□□□□□ -1.03
DDX41-204ENST00000504807 GZMBP10144 247 aa8.61□□□□□ -1.03
DDX41-204ENST00000504807 SSTP61278 116 aa8.61□□□□□ -1.03
DDX41-204ENST00000504807 NTM-AS1Q6ZSK4 140 aa8.61□□□□□ -1.03
DDX41-204ENST00000504807 A0A087WWC5 75 aa8.6□□□□□ -1.03
DDX41-204ENST00000504807 A0A0D9SG52 128 aa8.6□□□□□ -1.03
DDX41-204ENST00000504807 RBFOX3A6NFN3 312 aa8.6□□□□□ -1.03
DDX41-204ENST00000504807 H2AFB1P0C5Y9 115 aa8.6□□□□□ -1.03
DDX41-204ENST00000504807 RPL35P42766 123 aaKnown RBP8.6□□□□□ -1.03
DDX41-204ENST00000504807 ENHOQ6UWT2 76 aa8.6□□□□□ -1.03
DDX41-204ENST00000504807 OR10G8Q8NGN5 311 aa8.6□□□□□ -1.03
DDX41-204ENST00000504807 C11orf52Q96A22 123 aa8.6□□□□□ -1.03
DDX41-204ENST00000504807 TRBV20OR9-2A0A075B6H5 130 aa8.59□□□□□ -1.03
DDX41-204ENST00000504807 TRBV7-3A0A075B6L6 115 aa8.59□□□□□ -1.03
DDX41-204ENST00000504807 TRAV8-3A0A0A6YYJ7 113 aa8.59□□□□□ -1.03
DDX41-204ENST00000504807 TRBV10-1A0A0K0K1A3 114 aa8.59□□□□□ -1.03
DDX41-204ENST00000504807 KANTRA0A1W2PQU2 76 aa8.59□□□□□ -1.03
DDX41-204ENST00000504807 C1QBP02746 253 aa8.59□□□□□ -1.03
DDX41-204ENST00000504807 CXCL1P09341 107 aa8.59□□□□□ -1.03
DDX41-204ENST00000504807 ZNF56Q15929 161 aa8.59□□□□□ -1.03
DDX41-204ENST00000504807 MPV17L2Q567V2 206 aa8.59□□□□□ -1.03
DDX41-204ENST00000504807 UBE2WQ96B02 151 aa8.59□□□□□ -1.03
DDX41-204ENST00000504807 TM2D2Q9BX73 214 aa8.59□□□□□ -1.03
DDX41-204ENST00000504807 GNG13Q9P2W3 67 aa8.59□□□□□ -1.03
DDX41-204ENST00000504807 RAB19A4D1S5 217 aa8.58□□□□□ -1.04
DDX41-204ENST00000504807 OR5AL1P0C617 328 aa8.58□□□□□ -1.04
DDX41-204ENST00000504807 RAB4BP61018 213 aa8.58□□□□□ -1.04
DDX41-204ENST00000504807 RPL36AP83881 106 aaKnown RBP8.58□□□□□ -1.04
DDX41-204ENST00000504807 ATRAIDQ6UW56 229 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms