RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 DNAH10OSP0CZ25 163 aa9.66□□□□□ -0.86
HOXC9-202ENST00000504557 Q6ZRN7 208 aaPredicted RBP9.66□□□□□ -0.86
HOXC9-202ENST00000504557 C9orf62Q8N4C0 152 aa9.66□□□□□ -0.86
HOXC9-202ENST00000504557 OR10AG1Q8NH19 301 aa9.66□□□□□ -0.86
HOXC9-202ENST00000504557 GTSF1LQ9H1H1 148 aa9.66□□□□□ -0.86
HOXC9-202ENST00000504557 RHODO00212 210 aa9.65□□□□□ -0.86
HOXC9-202ENST00000504557 KRTAP10-2P60368 255 aa9.65□□□□□ -0.86
HOXC9-202ENST00000504557 MEF2BQ02080 365 aaPredicted RBP9.65□□□□□ -0.86
HOXC9-202ENST00000504557 PIK3CD-AS1Q5SR53 167 aa9.65□□□□□ -0.86
HOXC9-202ENST00000504557 UFSP1Q6NVU6 142 aa9.65□□□□□ -0.86
HOXC9-202ENST00000504557 ALKAL2Q6UX46 152 aa9.65□□□□□ -0.86
HOXC9-202ENST00000504557 SFRP2Q96HF1 295 aa9.65□□□□□ -0.86
HOXC9-202ENST00000504557 MLST8Q9BVC4 326 aa9.65□□□□□ -0.86
HOXC9-202ENST00000504557 TPPP3Q9BW30 176 aa9.65□□□□□ -0.86
HOXC9-202ENST00000504557 Q9HAA7 133 aa9.65□□□□□ -0.86
HOXC9-202ENST00000504557 SCRT2Q9NQ03 307 aa9.65□□□□□ -0.86
HOXC9-202ENST00000504557 MED9Q9NWA0 146 aa9.65□□□□□ -0.86
HOXC9-202ENST00000504557 DYNC1H1Q14204 4646 aaKnown RBP9.65□□□□□ -0.86
HOXC9-202ENST00000504557 GZMBP10144 247 aa9.64□□□□□ -0.87
HOXC9-202ENST00000504557 NKX2-5P52952 324 aaPredicted RBP9.64□□□□□ -0.87
HOXC9-202ENST00000504557 ERVFC1-1P60608 527 aa9.64□□□□□ -0.87
HOXC9-202ENST00000504557 ZNF56Q15929 161 aa9.64□□□□□ -0.87
HOXC9-202ENST00000504557 LELP1Q5T871 98 aa9.64□□□□□ -0.87
HOXC9-202ENST00000504557 SPANXN1Q5VSR9 72 aa9.64□□□□□ -0.87
HOXC9-202ENST00000504557 NFE4Q86UQ8 179 aa9.64□□□□□ -0.87
HOXC9-202ENST00000504557 C11orf52Q96A22 123 aa9.64□□□□□ -0.87
HOXC9-202ENST00000504557 DAZAP1Q96EP5 407 aaKnown RBP9.64□□□□□ -0.87
HOXC9-202ENST00000504557 HERC2O95714 4834 aa9.64□□□□□ -0.87
HOXC9-202ENST00000504557 DNAH11Q96DT5 4516 aa9.63□□□□□ -0.87
HOXC9-202ENST00000504557 A0A1B0GVG6 124 aa9.63□□□□□ -0.87
HOXC9-202ENST00000504557 EREGO14944 169 aa9.63□□□□□ -0.87
HOXC9-202ENST00000504557 BCL2P10415 239 aa9.63□□□□□ -0.87
HOXC9-202ENST00000504557 BTF3P20290 206 aaKnown RBP9.63□□□□□ -0.87
HOXC9-202ENST00000504557 GNG4P50150 75 aa9.63□□□□□ -0.87
HOXC9-202ENST00000504557 TIRAPP58753 221 aa9.63□□□□□ -0.87
HOXC9-202ENST00000504557 Q8N3U1 123 aa9.63□□□□□ -0.87
HOXC9-202ENST00000504557 C10orf126Q8N4M7 172 aa9.63□□□□□ -0.87
HOXC9-202ENST00000504557 PSCAO43653 123 aa9.62□□□□□ -0.87
HOXC9-202ENST00000504557 PDE6DO43924 150 aa9.62□□□□□ -0.87
HOXC9-202ENST00000504557 LINC01556Q5JQF7 62 aa9.62□□□□□ -0.87
HOXC9-202ENST00000504557 OR2D3Q8NGH3 330 aa9.62□□□□□ -0.87
HOXC9-202ENST00000504557 VAX2Q9UIW0 290 aa9.62□□□□□ -0.87
HOXC9-202ENST00000504557 RBFOX3A6NFN3 312 aa9.61□□□□□ -0.87
HOXC9-202ENST00000504557 F5H697 171 aa9.61□□□□□ -0.87
HOXC9-202ENST00000504557 IGLV2-8P01709 118 aa9.61□□□□□ -0.87
HOXC9-202ENST00000504557 LINC00694P0DN24 101 aa9.6□□□□□ -0.87
HOXC9-202ENST00000504557 KRTAP3-3Q9BYR6 98 aa9.6□□□□□ -0.87
HOXC9-202ENST00000504557 KRTAP3-2Q9BYR7 98 aa9.6□□□□□ -0.87
HOXC9-202ENST00000504557 TRBV20OR9-2A0A075B6H5 130 aa9.59□□□□□ -0.87
HOXC9-202ENST00000504557 K7EP13 123 aa9.59□□□□□ -0.87
HOXC9-202ENST00000504557 SNAI2O43623 268 aa9.59□□□□□ -0.87
HOXC9-202ENST00000504557 P01737 135 aa9.59□□□□□ -0.87
HOXC9-202ENST00000504557 MGPP08493 103 aa9.59□□□□□ -0.87
HOXC9-202ENST00000504557 CXCL1P09341 107 aa9.59□□□□□ -0.87
HOXC9-202ENST00000504557 SMIM17P0DL12 118 aa9.59□□□□□ -0.87
HOXC9-202ENST00000504557 CEBPGP53567 150 aa9.59□□□□□ -0.87
HOXC9-202ENST00000504557 RPL36AP83881 106 aaKnown RBP9.59□□□□□ -0.87
HOXC9-202ENST00000504557 RPL36ALQ969Q0 106 aaKnown RBP9.59□□□□□ -0.87
HOXC9-202ENST00000504557 A0A087WTM6 91 aa9.58□□□□□ -0.88
HOXC9-202ENST00000504557 IBA57-AS1B1ANH7 110 aa9.58□□□□□ -0.88
HOXC9-202ENST00000504557 OR5AL1P0C617 328 aa9.58□□□□□ -0.88
HOXC9-202ENST00000504557 DAZ4Q86SG3 579 aaKnown RBP9.58□□□□□ -0.88
HOXC9-202ENST00000504557 FER1L6-AS1Q8NA97 138 aa9.58□□□□□ -0.88
HOXC9-202ENST00000504557 DAZ3Q9NR90 486 aaKnown RBP9.58□□□□□ -0.88
HOXC9-202ENST00000504557 URGCP-MRPS24S4R325 110 aa9.58□□□□□ -0.88
HOXC9-202ENST00000504557 C19orf71A6NCJ1 209 aa9.57□□□□□ -0.88
HOXC9-202ENST00000504557 RPS20P60866 119 aaKnown RBP9.57□□□□□ -0.88
HOXC9-202ENST00000504557 RAB4BP61018 213 aa9.57□□□□□ -0.88
HOXC9-202ENST00000504557 BLOC1S1P78537 153 aa9.57□□□□□ -0.88
HOXC9-202ENST00000504557 AP1S3Q96PC3 154 aa9.57□□□□□ -0.88
HOXC9-202ENST00000504557 SSBP4Q9BWG4 385 aaPredicted RBP9.57□□□□□ -0.88
HOXC9-202ENST00000504557 TRBV7-3A0A075B6L6 115 aa9.56□□□□□ -0.88
HOXC9-202ENST00000504557 A0A087WWC5 75 aa9.56□□□□□ -0.88
HOXC9-202ENST00000504557 TRBV10-1A0A0K0K1A3 114 aa9.56□□□□□ -0.88
HOXC9-202ENST00000504557 NEXN-AS1Q8NBZ9 246 aa9.56□□□□□ -0.88
HOXC9-202ENST00000504557 XKRY2A2RUG3 117 aa9.55□□□□□ -0.88
HOXC9-202ENST00000504557 TAGLN2P37802 199 aaKnown RBP9.55□□□□□ -0.88
HOXC9-202ENST00000504557 UBE2D3P61077 147 aa9.55□□□□□ -0.88
HOXC9-202ENST00000504557 UBE2D2P62837 147 aa9.55□□□□□ -0.88
HOXC9-202ENST00000504557 RNASE7Q9H1E1 156 aaKnown RBP9.55□□□□□ -0.88
HOXC9-202ENST00000504557 BIN3Q9NQY0 253 aa9.55□□□□□ -0.88
HOXC9-202ENST00000504557 IGLC6P0CF74 106 aa9.54□□□□□ -0.88
HOXC9-202ENST00000504557 TOR2AQ5JU69 321 aa9.54□□□□□ -0.88
HOXC9-202ENST00000504557 KCNIP4Q6PIL6 250 aa9.54□□□□□ -0.88
HOXC9-202ENST00000504557 LYZL1Q6UWQ5 148 aa9.54□□□□□ -0.88
HOXC9-202ENST00000504557 MAPKAPK5-AS1Q8N8E1 139 aa9.54□□□□□ -0.88
HOXC9-202ENST00000504557 NUDT10Q8NFP7 164 aa9.54□□□□□ -0.88
HOXC9-202ENST00000504557 OCC1Q8TAD7 63 aa9.54□□□□□ -0.88
HOXC9-202ENST00000504557 SMIM12Q96EX1 92 aa9.54□□□□□ -0.88
HOXC9-202ENST00000504557 NUDT11Q96G61 164 aa9.54□□□□□ -0.88
HOXC9-202ENST00000504557 PGPEP1Q9NXJ5 209 aa9.54□□□□□ -0.88
HOXC9-202ENST00000504557 RYR1P21817 5038 aa9.54□□□□□ -0.88
HOXC9-202ENST00000504557 A0A087WX48 190 aa9.53□□□□□ -0.88
HOXC9-202ENST00000504557 TMEM262E9PQX1 116 aa9.53□□□□□ -0.88
HOXC9-202ENST00000504557 K7EN84 100 aa9.53□□□□□ -0.88
HOXC9-202ENST00000504557 LECT2O14960 151 aa9.53□□□□□ -0.88
HOXC9-202ENST00000504557 CDK2AP2O75956 126 aa9.53□□□□□ -0.88
HOXC9-202ENST00000504557 CACNG7P62955 275 aa9.53□□□□□ -0.88
HOXC9-202ENST00000504557 NIT1Q86X76 327 aa9.53□□□□□ -0.88
HOXC9-202ENST00000504557 DNAJC30Q96LL9 226 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms