RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 AP1S3Q96PC3 154 aa6.6□□□□□ -1.35
CASC9-201ENST00000504531 SMR3AQ99954 134 aa6.6□□□□□ -1.35
CASC9-201ENST00000504531 TM2D2Q9BX73 214 aa6.6□□□□□ -1.35
CASC9-201ENST00000504531 WNK2Q9Y3S1 2297 aa6.6□□□□□ -1.35
CASC9-201ENST00000504531 DCHS2Q6V1P9 2916 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 IGHV3OR16-8A0A075B7F1 116 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 IGHV4-30-2A0A087WSY4 118 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 TRAV2A0A0B4J234 112 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 IGHV3-66A0A0C4DH42 116 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 TRBV6-5A0A0K0K1A5 114 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 CBY3A6NI87 242 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 H7C1H1 209 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 PF4V1P10720 104 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 MALP21145 153 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 S100A4P26447 101 aaKnown RBP6.59□□□□□ -1.35
CASC9-201ENST00000504531 VAMP3Q15836 100 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 PIK3CD-AS1Q5SR53 167 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 BRD3OSQ6XYD6 125 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 GTF2H5Q6ZYL4 71 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 OR4C5Q8NGB2 326 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 DCANP1Q8TF63 244 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 PHLDA3Q9Y5J5 127 aa6.59□□□□□ -1.35
CASC9-201ENST00000504531 HRNRQ86YZ3 2850 aaPredicted RBP6.59□□□□□ -1.36
CASC9-201ENST00000504531 NIPBLQ6KC79 2804 aaeCLIP6.58□□□□□ -1.36
CASC9-201ENST00000504531 F8VRH5 84 aa6.58□□□□□ -1.36
CASC9-201ENST00000504531 H0Y8G0 127 aa6.58□□□□□ -1.36
CASC9-201ENST00000504531 ZNF207O43670 478 aaKnown RBP6.58□□□□□ -1.36
CASC9-201ENST00000504531 DUSP14O95147 198 aaKnown RBP6.58□□□□□ -1.36
CASC9-201ENST00000504531 ANXA2RQ3ZCQ2 193 aa6.58□□□□□ -1.36
CASC9-201ENST00000504531 PRR9Q5T870 116 aa6.58□□□□□ -1.36
CASC9-201ENST00000504531 Q6YL49 198 aa6.58□□□□□ -1.36
CASC9-201ENST00000504531 ERASQ7Z444 233 aa6.58□□□□□ -1.36
CASC9-201ENST00000504531 OR5A1Q8NGJ0 315 aa6.58□□□□□ -1.36
CASC9-201ENST00000504531 EDA2RQ9HAV5 297 aa6.58□□□□□ -1.36
CASC9-201ENST00000504531 KIF25-AS1Q9Y6Z4 181 aa6.58□□□□□ -1.36
CASC9-201ENST00000504531 MTORP42345 2549 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 IGHV3OR16-13A0A075B7E8 117 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 A0A096LNT2 108 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 IGHV3-74A0A0B4J1X5 117 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 H3BVH4 76 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 TRBV12-3P01733 135 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 RNASE3P12724 160 aaKnown RBP6.57□□□□□ -1.36
CASC9-201ENST00000504531 BLCAPP62952 87 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 FAM159AQ6UWV7 190 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 LRRC75A-AS1Q8N1F1 130 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 TEX29Q8N6K0 151 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 RASL10AQ92737 203 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 PTH2Q96A98 100 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 TMEM141Q96I45 108 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 UBE2E2Q96LR5 201 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 MCRIP2Q9BUT9 160 aaKnown RBP6.57□□□□□ -1.36
CASC9-201ENST00000504531 KLK15Q9H2R5 256 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 ABCA2Q9BZC7 2435 aa6.57□□□□□ -1.36
CASC9-201ENST00000504531 IGHV3-49A0A0A0MS15 119 aa6.56□□□□□ -1.36
CASC9-201ENST00000504531 A8MTW9 85 aa6.56□□□□□ -1.36
CASC9-201ENST00000504531 VCYO14598 125 aa6.56□□□□□ -1.36
CASC9-201ENST00000504531 GAS8-AS1O95177 125 aa6.56□□□□□ -1.36
CASC9-201ENST00000504531 CDKN1BP46527 198 aa6.56□□□□□ -1.36
CASC9-201ENST00000504531 POLR2KP53803 58 aaKnown RBP6.56□□□□□ -1.36
CASC9-201ENST00000504531 LINC00315P59091 139 aa6.56□□□□□ -1.36
CASC9-201ENST00000504531 SNRPD3P62318 126 aaKnown RBP6.56□□□□□ -1.36
CASC9-201ENST00000504531 UFSP1Q6NVU6 142 aa6.56□□□□□ -1.36
CASC9-201ENST00000504531 NEXN-AS1Q8NBZ9 246 aa6.56□□□□□ -1.36
CASC9-201ENST00000504531 WFDC11Q8NEX6 87 aa6.56□□□□□ -1.36
CASC9-201ENST00000504531 LINC00476Q8WZB0 136 aa6.56□□□□□ -1.36
CASC9-201ENST00000504531 C9orf85Q96MD7 179 aa6.56□□□□□ -1.36
CASC9-201ENST00000504531 TIMM8BQ9Y5J9 83 aaPredicted RBP6.56□□□□□ -1.36
CASC9-201ENST00000504531 PRRC2AP48634 2157 aaKnown RBP6.55□□□□□ -1.36
CASC9-201ENST00000504531 GAGE10A6NGK3 116 aa6.55□□□□□ -1.36
CASC9-201ENST00000504531 K7EQG2 157 aa6.55□□□□□ -1.36
CASC9-201ENST00000504531 LGALS1P09382 135 aaKnown RBP6.55□□□□□ -1.36
CASC9-201ENST00000504531 SMIM13P0DJ93 91 aa6.55□□□□□ -1.36
CASC9-201ENST00000504531 GATA1P15976 413 aaPredicted RBP6.55□□□□□ -1.36
CASC9-201ENST00000504531 RNASE4P34096 147 aaKnown RBP6.55□□□□□ -1.36
CASC9-201ENST00000504531 LY6EQ16553 131 aa6.55□□□□□ -1.36
CASC9-201ENST00000504531 ZC2HC1BQ5TFG8 222 aa6.55□□□□□ -1.36
CASC9-201ENST00000504531 AMMECR1LQ6DCA0 310 aa6.55□□□□□ -1.36
CASC9-201ENST00000504531 PRIMA1Q86XR5 153 aa6.55□□□□□ -1.36
CASC9-201ENST00000504531 PCP2Q8IVA1 136 aa6.55□□□□□ -1.36
CASC9-201ENST00000504531 Q8N2B8 174 aa6.55□□□□□ -1.36
CASC9-201ENST00000504531 SCGB3A1Q96QR1 104 aa6.55□□□□□ -1.36
CASC9-201ENST00000504531 TIMM17AQ99595 171 aa6.55□□□□□ -1.36
CASC9-201ENST00000504531 BEX4Q9NWD9 120 aaPredicted RBP6.55□□□□□ -1.36
CASC9-201ENST00000504531 LINC00527Q9UJ94 153 aa6.55□□□□□ -1.36
CASC9-201ENST00000504531 VPREB3Q9UKI3 123 aa6.55□□□□□ -1.36
CASC9-201ENST00000504531 ZNF256Q9Y2P7 627 aaPredicted RBP6.55□□□□□ -1.36
CASC9-201ENST00000504531 TRBV25-1A0A075B6N4 114 aa6.54□□□□□ -1.36
CASC9-201ENST00000504531 IGHV3OR16-10A0A075B7F0 116 aa6.54□□□□□ -1.36
CASC9-201ENST00000504531 A0A0J9YX75 114 aa6.54□□□□□ -1.36
CASC9-201ENST00000504531 TRBV27A0A0K0K1C4 114 aa6.54□□□□□ -1.36
CASC9-201ENST00000504531 E9PLD3 99 aa6.54□□□□□ -1.36
CASC9-201ENST00000504531 LY6G6DO95868 133 aa6.54□□□□□ -1.36
CASC9-201ENST00000504531 NMUP48645 174 aa6.54□□□□□ -1.36
CASC9-201ENST00000504531 CRYBA4P53673 196 aa6.54□□□□□ -1.36
CASC9-201ENST00000504531 DEFB113Q30KQ7 82 aa6.54□□□□□ -1.36
CASC9-201ENST00000504531 FOXI2Q6ZQN5 318 aa6.54□□□□□ -1.36
CASC9-201ENST00000504531 SPATA3Q8NHX4 192 aa6.54□□□□□ -1.36
CASC9-201ENST00000504531 C18orf15Q96N68 181 aa6.54□□□□□ -1.36
CASC9-201ENST00000504531 LINC00467Q9BRT7 94 aa6.54□□□□□ -1.36
CASC9-201ENST00000504531 MRPL35Q9NZE8 188 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms