RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CD7P09564 240 aa5.79□□□□□ -1.48
NEDD9-208ENST00000504387 NHLRC4P0CG21 123 aaPredicted RBP5.79□□□□□ -1.48
NEDD9-208ENST00000504387 DUX3Q96PT4 197 aa5.79□□□□□ -1.48
NEDD9-208ENST00000504387 IGHV3-73A0A0B4J1V6 119 aa5.79□□□□□ -1.48
NEDD9-208ENST00000504387 TRAV12-3A0A0B4J271 114 aa5.79□□□□□ -1.48
NEDD9-208ENST00000504387 RBAKDNA6NC62 111 aa5.79□□□□□ -1.48
NEDD9-208ENST00000504387 A8MZ25 164 aa5.79□□□□□ -1.48
NEDD9-208ENST00000504387 LGALS3P17931 250 aaKnown RBP5.79□□□□□ -1.48
NEDD9-208ENST00000504387 TMEM95Q3KNT9 176 aa5.79□□□□□ -1.48
NEDD9-208ENST00000504387 PIFOQ8TCI5 191 aa5.79□□□□□ -1.48
NEDD9-208ENST00000504387 PRO1854Q9UHT4 67 aa5.79□□□□□ -1.48
NEDD9-208ENST00000504387 ORMDL2Q53FV1 153 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 DAND5Q8N907 189 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 C15orf53Q8NAA6 179 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 C20orf173Q96LM9 149 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 CHCHD5Q9BSY4 110 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 HRNRQ86YZ3 2850 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-208ENST00000504387 CLPSL1A2RUU4 121 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 ATP6V0E1O15342 81 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 RS1O15537 224 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 CRYGDP07320 174 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 UBE2D1P51668 147 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 NDUFV3P56181 108 aaKnown RBP5.78□□□□□ -1.48
NEDD9-208ENST00000504387 BRD3OSQ6XYD6 125 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 MUSTN1Q8IVN3 82 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 Q8N1Y9 231 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 TOMM6Q96B49 74 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 SPXQ9BT56 116 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 TNFRSF13BO14836 293 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-208ENST00000504387 ZNF56Q15929 161 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 C10orf126Q8N4M7 172 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 MUC4Q99102 2169 aa5.78□□□□□ -1.48
NEDD9-208ENST00000504387 SONP18583 2426 aaKnown RBP5.77□□□□□ -1.49
NEDD9-208ENST00000504387 TRBV7-9A0A0J9YWB2 115 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 TSHBP01222 138 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 TRBV12-3P01733 135 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 HERVK_113P61574 105 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 CEMP1Q6PRD7 247 aaPredicted RBP5.77□□□□□ -1.49
NEDD9-208ENST00000504387 ZNRF2Q8NHG8 242 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 CLEC2BQ92478 149 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 IGHV7-81A0A0B4J1V7 117 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 GAGE12JA6NER3 117 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 GAGE7O76087 117 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 GAGE12FP0CL80 117 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 GAGE12GP0CL81 117 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 GAGE12IP0CL82 117 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 UBE2D3P61077 147 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 UBE2D2P62837 147 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 GAGE4Q13068 117 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 LY6DQ14210 128 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 KAAG1Q9UBP8 84 aa5.77□□□□□ -1.49
NEDD9-208ENST00000504387 TRAV12-2A0A075B6T6 113 aa5.76□□□□□ -1.49
NEDD9-208ENST00000504387 J3QQQ9 107 aa5.76□□□□□ -1.49
NEDD9-208ENST00000504387 IGHV3-30P01768 117 aa5.76□□□□□ -1.49
NEDD9-208ENST00000504387 IGHV3-30-5P0DP03 117 aa5.76□□□□□ -1.49
NEDD9-208ENST00000504387 ASIPP42127 132 aa5.76□□□□□ -1.49
NEDD9-208ENST00000504387 MEIG1Q5JSS6 88 aa5.76□□□□□ -1.49
NEDD9-208ENST00000504387 METTL26Q96S19 204 aa5.76□□□□□ -1.49
NEDD9-208ENST00000504387 CNFNQ9BYD5 112 aa5.76□□□□□ -1.49
NEDD9-208ENST00000504387 PRRC2AP48634 2157 aaKnown RBP5.76□□□□□ -1.49
NEDD9-208ENST00000504387 TRAV8-4A0A0B4J246 113 aa5.76□□□□□ -1.49
NEDD9-208ENST00000504387 IFITM1P13164 125 aa5.76□□□□□ -1.49
NEDD9-208ENST00000504387 EDN2P20800 178 aa5.76□□□□□ -1.49
NEDD9-208ENST00000504387 UNQ9165/PRO28630Q6UXU0 137 aa5.76□□□□□ -1.49
NEDD9-208ENST00000504387 ZNF625Q96I27 306 aaPredicted RBP5.76□□□□□ -1.49
NEDD9-208ENST00000504387 DPH3P1Q9H4G8 78 aa5.76□□□□□ -1.49
NEDD9-208ENST00000504387 CCDC168Q8NDH2 2452 aa5.76□□□□□ -1.49
NEDD9-208ENST00000504387 TRAV8-3A0A0A6YYJ7 113 aa5.76□□□□□ -1.49
NEDD9-208ENST00000504387 EIF4EBP3O60516 100 aaPredicted RBP5.76□□□□□ -1.49
NEDD9-208ENST00000504387 ZFP36P26651 326 aaKnown RBP5.76□□□□□ -1.49
NEDD9-208ENST00000504387 RPL32P62910 135 aaKnown RBP5.76□□□□□ -1.49
NEDD9-208ENST00000504387 IGLV4-69A0A075B6H9 119 aa5.75□□□□□ -1.49
NEDD9-208ENST00000504387 A0A0J9YXV3 536 aa5.75□□□□□ -1.49
NEDD9-208ENST00000504387 LY6LH3BQJ8 138 aa5.75□□□□□ -1.49
NEDD9-208ENST00000504387 PRM2P04554 102 aa5.75□□□□□ -1.49
NEDD9-208ENST00000504387 COX6B1P14854 86 aa5.75□□□□□ -1.49
NEDD9-208ENST00000504387 LYRM7Q5U5X0 104 aa5.75□□□□□ -1.49
NEDD9-208ENST00000504387 CCDC140Q96MF4 163 aa5.75□□□□□ -1.49
NEDD9-208ENST00000504387 SLC50A1Q9BRV3 221 aa5.75□□□□□ -1.49
NEDD9-208ENST00000504387 C2orf82Q6UX34 121 aa5.75□□□□□ -1.49
NEDD9-208ENST00000504387 C8orf31Q8N9H6 132 aa5.75□□□□□ -1.49
NEDD9-208ENST00000504387 EEF1AKMT3Q96AZ1 226 aa5.75□□□□□ -1.49
NEDD9-208ENST00000504387 TRAV12-1A0A0B4J245 112 aa5.74□□□□□ -1.49
NEDD9-208ENST00000504387 SDHAF1A6NFY7 115 aa5.74□□□□□ -1.49
NEDD9-208ENST00000504387 PF4V1P10720 104 aa5.74□□□□□ -1.49
NEDD9-208ENST00000504387 MRPL23Q16540 153 aaKnown RBP5.74□□□□□ -1.49
NEDD9-208ENST00000504387 PSMG4Q5JS54 123 aa5.74□□□□□ -1.49
NEDD9-208ENST00000504387 OR10J6PQ8NGY7 276 aa5.74□□□□□ -1.49
NEDD9-208ENST00000504387 ZFAND3Q9H8U3 227 aa5.74□□□□□ -1.49
NEDD9-208ENST00000504387 TMEM262E9PQX1 116 aa5.74□□□□□ -1.49
NEDD9-208ENST00000504387 SAA4P35542 130 aa5.74□□□□□ -1.49
NEDD9-208ENST00000504387 PMVKQ15126 192 aa5.74□□□□□ -1.49
NEDD9-208ENST00000504387 ATP6V0E2Q8NHE4 81 aa5.74□□□□□ -1.49
NEDD9-208ENST00000504387 ZNF22P17026 224 aaPredicted RBP5.74□□□□□ -1.49
NEDD9-208ENST00000504387 BPESC1Q9GZL8 116 aa5.74□□□□□ -1.49
NEDD9-208ENST00000504387 LINC01546A6NGU7 62 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 RHODO00212 210 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 IGHV3-33P01772 117 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 LINC01620Q4KN68 170 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 SUMO4Q6EEV6 95 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms