RNA–Protein interactions for RNA: ENST00000503547.1

NR1I3-218, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 535 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-218	ENST00000503547		B4DEV8	164 aa		5.79	□□□□□ -1.48
NR1I3-218	ENST00000503547	INMT-MINDY4	F8WBC2	141 aa		5.79	□□□□□ -1.48
NR1I3-218	ENST00000503547		M0R036	132 aa		5.79	□□□□□ -1.48
NR1I3-218	ENST00000503547	IFNA7	P01567	189 aa		5.79	□□□□□ -1.48
NR1I3-218	ENST00000503547	IGLV2-11	P01706	119 aa		5.79	□□□□□ -1.48
NR1I3-218	ENST00000503547	HLA-DQA1	P01909	254 aa		5.79	□□□□□ -1.48
NR1I3-218	ENST00000503547	STAG3L2	P0CL84	134 aa		5.79	□□□□□ -1.48
NR1I3-218	ENST00000503547	STAG3L3	P0CL85	134 aa		5.79	□□□□□ -1.48
NR1I3-218	ENST00000503547		Q0VG73	95 aa		5.79	□□□□□ -1.48
NR1I3-218	ENST00000503547	PIK3CD-AS1	Q5SR53	167 aa		5.79	□□□□□ -1.48
NR1I3-218	ENST00000503547	HSD17B11	Q8NBQ5	300 aa		5.79	□□□□□ -1.48
NR1I3-218	ENST00000503547	OR11H4	Q8NGC9	324 aa		5.79	□□□□□ -1.48
NR1I3-218	ENST00000503547	LINC00479	Q96M42	142 aa		5.79	□□□□□ -1.48
NR1I3-218	ENST00000503547	IL36B	Q9NZH7	164 aa		5.79	□□□□□ -1.48
NR1I3-218	ENST00000503547	FABP5P3	A8MUU1	101 aa		5.78	□□□□□ -1.48
NR1I3-218	ENST00000503547		M0R381	172 aa		5.78	□□□□□ -1.48
NR1I3-218	ENST00000503547	RPL36A	P83881	106 aa	Known RBP	5.78	□□□□□ -1.48
NR1I3-218	ENST00000503547	C15orf54	Q8N8G6	183 aa		5.78	□□□□□ -1.48
NR1I3-218	ENST00000503547	S100Z	Q8WXG8	99 aa		5.78	□□□□□ -1.48
NR1I3-218	ENST00000503547	RPL36AL	Q969Q0	106 aa	Known RBP	5.78	□□□□□ -1.48
NR1I3-218	ENST00000503547	RAB24	Q969Q5	203 aa		5.78	□□□□□ -1.48
NR1I3-218	ENST00000503547	CHCHD7	Q9BUK0	85 aa		5.78	□□□□□ -1.48
NR1I3-218	ENST00000503547	TMEM167B	Q9NRX6	74 aa		5.78	□□□□□ -1.48
NR1I3-218	ENST00000503547	PHLDA3	Q9Y5J5	127 aa		5.78	□□□□□ -1.48
NR1I3-218	ENST00000503547	ARL2-SNX15	V9GYD0	113 aa		5.78	□□□□□ -1.48
NR1I3-218	ENST00000503547	GRIFIN	A4D1Z8	144 aa		5.77	□□□□□ -1.49
NR1I3-218	ENST00000503547	USP17L23	D6RBM5	183 aa		5.77	□□□□□ -1.49
NR1I3-218	ENST00000503547	CXorf1	O96002	111 aa		5.77	□□□□□ -1.49
NR1I3-218	ENST00000503547	ARMS2	P0C7Q2	107 aa		5.77	□□□□□ -1.49
NR1I3-218	ENST00000503547	TPT1	P13693	172 aa	Known RBP	5.77	□□□□□ -1.49
NR1I3-218	ENST00000503547	UFSP1	Q6NVU6	142 aa		5.77	□□□□□ -1.49
NR1I3-218	ENST00000503547	ATRAID	Q6UW56	229 aa		5.77	□□□□□ -1.49
NR1I3-218	ENST00000503547	NDUFA13	Q9P0J0	144 aa		5.77	□□□□□ -1.49
NR1I3-218	ENST00000503547	TRBV7-3	A0A075B6L6	115 aa		5.76	□□□□□ -1.49
NR1I3-218	ENST00000503547	TMSB15B	A0A087X1C1	80 aa		5.76	□□□□□ -1.49
NR1I3-218	ENST00000503547	UPK1B	O75841	260 aa		5.76	□□□□□ -1.49
NR1I3-218	ENST00000503547	MB	P02144	154 aa		5.76	□□□□□ -1.49
NR1I3-218	ENST00000503547	ANG	P03950	147 aa	Known RBP	5.76	□□□□□ -1.49
NR1I3-218	ENST00000503547	HNRNPA3	P51991	378 aa	Known RBP	5.76	□□□□□ -1.49
NR1I3-218	ENST00000503547	UBE2G2	P60604	165 aa		5.76	□□□□□ -1.49
NR1I3-218	ENST00000503547		Q86TA4	180 aa		5.76	□□□□□ -1.49
NR1I3-218	ENST00000503547	SUN5	Q8TC36	379 aa		5.76	□□□□□ -1.49
NR1I3-218	ENST00000503547	ZC2HC1A	Q96GY0	325 aa		5.76	□□□□□ -1.49
NR1I3-218	ENST00000503547	ACTR3C	Q9C0K3	210 aa	Predicted RBP	5.76	□□□□□ -1.49
NR1I3-218	ENST00000503547	RNF213	Q63HN8	5207 aa		5.76	□□□□□ -1.49
NR1I3-218	ENST00000503547	TRBV10-1	A0A0K0K1A3	114 aa		5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	PEX7	O00628	323 aa		5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	SH2D1A	O60880	128 aa		5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	UBE2D3	P61077	147 aa		5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	UBE2D2	P62837	147 aa		5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	ZNF56	Q15929	161 aa		5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	MPV17L2	Q567V2	206 aa		5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	FAM162B	Q5T6X4	162 aa		5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	CLPSL2	Q6UWE3	100 aa		5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	ENHO	Q6UWT2	76 aa		5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	ZFP82	Q8N141	532 aa		5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	DAZAP1	Q96EP5	407 aa	Known RBP	5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	SFRP2	Q96HF1	295 aa		5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	CHCHD5	Q9BSY4	110 aa		5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	PSMG3	Q9BT73	122 aa	Predicted RBP	5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	BATF3	Q9NR55	127 aa		5.75	□□□□□ -1.49
NR1I3-218	ENST00000503547	TRBV6-8	A0A0A6YYG3	113 aa		5.74	□□□□□ -1.49
NR1I3-218	ENST00000503547		A0A0D9SG52	128 aa		5.74	□□□□□ -1.49
NR1I3-218	ENST00000503547		A0A1W2PRE2	83 aa		5.74	□□□□□ -1.49
NR1I3-218	ENST00000503547	KRBOX1	C9JBD0	128 aa		5.74	□□□□□ -1.49
NR1I3-218	ENST00000503547	PTTG1	O95997	202 aa		5.74	□□□□□ -1.49
NR1I3-218	ENST00000503547	ATP6V0C	P27449	155 aa		5.74	□□□□□ -1.49
NR1I3-218	ENST00000503547	SERF2	P84101	59 aa		5.74	□□□□□ -1.49
NR1I3-218	ENST00000503547	MARVELD1	Q9BSK0	173 aa		5.74	□□□□□ -1.49
NR1I3-218	ENST00000503547	PRSS1	P07477	247 aa		5.73	□□□□□ -1.49
NR1I3-218	ENST00000503547	PKIA	P61925	76 aa		5.73	□□□□□ -1.49
NR1I3-218	ENST00000503547	UBE2G1	P62253	170 aa		5.73	□□□□□ -1.49
NR1I3-218	ENST00000503547	MIA	Q16674	131 aa		5.73	□□□□□ -1.49
NR1I3-218	ENST00000503547	DNLZ	Q5SXM8	178 aa		5.73	□□□□□ -1.49
NR1I3-218	ENST00000503547	DGAT2L7P	Q6IED9	249 aa		5.73	□□□□□ -1.49
NR1I3-218	ENST00000503547	LINC00299	Q6ZSB3	139 aa		5.73	□□□□□ -1.49
NR1I3-218	ENST00000503547	DPH3	Q96FX2	82 aa		5.73	□□□□□ -1.49
NR1I3-218	ENST00000503547	DPH3P1	Q9H4G8	78 aa		5.73	□□□□□ -1.49
NR1I3-218	ENST00000503547	TNFSF18	Q9UNG2	199 aa		5.73	□□□□□ -1.49
NR1I3-218	ENST00000503547	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.73	□□□□□ -1.49
NR1I3-218	ENST00000503547	CRIP1	P50238	77 aa		5.72	□□□□□ -1.49
NR1I3-218	ENST00000503547	DEFA1	P59665	94 aa		5.72	□□□□□ -1.49
NR1I3-218	ENST00000503547	DEFA3	P59666	94 aa		5.72	□□□□□ -1.49
NR1I3-218	ENST00000503547	IFITM3	Q01628	133 aa		5.72	□□□□□ -1.49
NR1I3-218	ENST00000503547	C9orf163	Q8N9P6	203 aa		5.72	□□□□□ -1.49
NR1I3-218	ENST00000503547	HIST1H2BA	Q96A08	127 aa		5.72	□□□□□ -1.49
NR1I3-218	ENST00000503547	FMC1	Q96HJ9	113 aa		5.72	□□□□□ -1.49
NR1I3-218	ENST00000503547	ZFP30	Q9Y2G7	519 aa		5.72	□□□□□ -1.49
NR1I3-218	ENST00000503547	LRP2	P98164	4655 aa		5.72	□□□□□ -1.49
NR1I3-218	ENST00000503547	CTXND1	A0A1B0GTU2	59 aa		5.71	□□□□□ -1.5
NR1I3-218	ENST00000503547	hDV102S1	A0JD36	115 aa		5.71	□□□□□ -1.5
NR1I3-218	ENST00000503547	FAM74A7	A6NL05	159 aa		5.71	□□□□□ -1.5
NR1I3-218	ENST00000503547		F5H697	171 aa		5.71	□□□□□ -1.5
NR1I3-218	ENST00000503547	PANO1	I0J062	215 aa		5.71	□□□□□ -1.5
NR1I3-218	ENST00000503547	MT1HL1	P0DM35	61 aa		5.71	□□□□□ -1.5
NR1I3-218	ENST00000503547	RAB4B	P61018	213 aa		5.71	□□□□□ -1.5
NR1I3-218	ENST00000503547	RPL19	P84098	196 aa	Known RBP	5.71	□□□□□ -1.5
NR1I3-218	ENST00000503547		Q6ZRU5	148 aa		5.71	□□□□□ -1.5
NR1I3-218	ENST00000503547	LINC00269	Q8N2A0	174 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms