RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 ZFP30Q9Y2G7 519 aa4.72□□□□□ -1.65
SH3RF1-202ENST00000502315 RBFOX3A6NFN3 312 aa4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 F6UZH7 168 aa4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 IGLV2-11P01706 119 aa4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 IGHV3-30P01768 117 aa4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 IGHV3-33P01772 117 aa4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 ARL14EPLP0DKL9 152 aa4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 IGHV3-30-3P0DP02 117 aa4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 IGHV3-30-5P0DP03 117 aa4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 GCHFRP30047 84 aa4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 SUMO1P63165 101 aaKnown RBP4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 IFITM2Q01629 132 aa4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 LGALSLQ3ZCW2 172 aaPredicted RBP4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 TMEM97Q5BJF2 176 aa4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 DGAT2L7PQ6IED9 249 aa4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 NIT1Q86X76 327 aa4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 RAB24Q969Q5 203 aa4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 AQP10Q96PS8 301 aa4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 ACTR3CQ9C0K3 210 aaPredicted RBP4.71□□□□□ -1.66
SH3RF1-202ENST00000502315 FLG2Q5D862 2391 aaPredicted RBP4.7□□□□□ -1.66
SH3RF1-202ENST00000502315 A0A087WX48 190 aa4.7□□□□□ -1.66
SH3RF1-202ENST00000502315 TRBV6-1A0A0K0K1D8 114 aa4.7□□□□□ -1.66
SH3RF1-202ENST00000502315 ARPC5O15511 151 aa4.7□□□□□ -1.66
SH3RF1-202ENST00000502315 ZNF80P51504 273 aaPredicted RBP4.7□□□□□ -1.66
SH3RF1-202ENST00000502315 OR10G8Q8NGN5 311 aa4.7□□□□□ -1.66
SH3RF1-202ENST00000502315 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
SH3RF1-202ENST00000502315 C11orf21Q9P2W6 132 aa4.7□□□□□ -1.66
SH3RF1-202ENST00000502315 RPH3ALQ9UNE2 315 aa4.7□□□□□ -1.66
SH3RF1-202ENST00000502315 TRBV7-3A0A075B6L6 115 aa4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 IGKV3D-20A0A0C4DH25 116 aa4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 CXCL1P09341 107 aa4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 ATP6V0CP27449 155 aa4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 FHITP49789 147 aa4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 RAB2AP61019 212 aa4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 GNG5P63218 68 aa4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 RPL36AP83881 106 aaKnown RBP4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 SCXQ7RTU7 201 aa4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 DAZ4Q86SG3 579 aaKnown RBP4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 PRNTQ86SH4 94 aa4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 RPL36ALQ969Q0 106 aaKnown RBP4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 SFRP2Q96HF1 295 aa4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 WFDC1Q9HC57 220 aa4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 DAZ3Q9NR90 486 aaKnown RBP4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 ARL2-SNX15V9GYD0 113 aa4.69□□□□□ -1.66
SH3RF1-202ENST00000502315 IGHV3-73A0A0B4J1V6 119 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 GAGE12JA6NER3 117 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 HMSDA8MTL9 139 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 B4DEV8 164 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 KRBOX1C9JBD0 128 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 S100A9P06702 114 aaKnown RBP4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 RAB4BP61018 213 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 GAGE1Q13065 139 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 GAGE4Q13068 117 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 GAGE5Q13069 117 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 MIAQ16674 131 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 GAGE13Q4V321 117 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 FAM162BQ5T6X4 162 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 TMUB2Q71RG4 321 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 ZFP82Q8N141 532 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 CLRN3Q8NCR9 226 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 BAALCQ8WXS3 180 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 FMC1Q96HJ9 113 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 C1orf43Q9BWL3 253 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 SMIM3Q9BZL3 60 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 PHLDA3Q9Y5J5 127 aa4.68□□□□□ -1.66
SH3RF1-202ENST00000502315 IGKV2D-24A0A075B6R9 120 aa4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 TRBV6-8A0A0A6YYG3 113 aa4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 BORCS7-ASMTA0A0B4J1R7 106 aa4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 CTXND1A0A1B0GTU2 59 aa4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 A6NJY4 79 aa4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 IFNA7P01567 189 aa4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 ARMS2P0C7Q2 107 aa4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 GZMBP10144 247 aa4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 TPT1P13693 172 aaKnown RBP4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 KRTAP10-4P60372 401 aaPredicted RBP4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 RPL19P84098 196 aaKnown RBP4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 WFDC2Q14508 124 aa4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 ZNF674Q2M3X9 581 aa4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 KCNRGQ8N5I3 272 aa4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 INO80EQ8NBZ0 244 aaPredicted RBP4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 CIRBP-AS1Q8TBR5 109 aa4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 KLK12Q9UKR0 248 aa4.67□□□□□ -1.66
SH3RF1-202ENST00000502315 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.66□□□□□ -1.66
SH3RF1-202ENST00000502315 PEX7O00628 323 aa4.66□□□□□ -1.66
SH3RF1-202ENST00000502315 HMGB3O15347 200 aaKnown RBP4.66□□□□□ -1.66
SH3RF1-202ENST00000502315 BCL2L11O43521 198 aa4.66□□□□□ -1.66
SH3RF1-202ENST00000502315 UBE2D3P61077 147 aa4.66□□□□□ -1.66
SH3RF1-202ENST00000502315 UBE2D2P62837 147 aa4.66□□□□□ -1.66
SH3RF1-202ENST00000502315 Q6ZRU5 148 aa4.66□□□□□ -1.66
SH3RF1-202ENST00000502315 C14orf178Q8N769 122 aaPredicted RBP4.66□□□□□ -1.66
SH3RF1-202ENST00000502315 C9orf163Q8N9P6 203 aa4.66□□□□□ -1.66
SH3RF1-202ENST00000502315 UBE2WQ96B02 151 aa4.66□□□□□ -1.66
SH3RF1-202ENST00000502315 RNF185Q96GF1 192 aa4.66□□□□□ -1.66
SH3RF1-202ENST00000502315 SGK494Q96LW2 274 aa4.66□□□□□ -1.66
SH3RF1-202ENST00000502315 SAMD10Q9BYL1 202 aa4.66□□□□□ -1.66
SH3RF1-202ENST00000502315 A0A0D9SG52 128 aa4.65□□□□□ -1.67
SH3RF1-202ENST00000502315 KANTRA0A1W2PQU2 76 aa4.65□□□□□ -1.67
SH3RF1-202ENST00000502315 FAM74A7A6NL05 159 aa4.65□□□□□ -1.67
SH3RF1-202ENST00000502315 LTAP01374 205 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms