RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	FAM74A4	Q5TZK3	123 aa		7.32	□□□□□ -1.24
CDK11A-222	ENST00000498810	TCTE3	Q8IZS6	198 aa		7.32	□□□□□ -1.24
CDK11A-222	ENST00000498810	HECTD4	Q9Y4D8	3996 aa		7.31	□□□□□ -1.24
CDK11A-222	ENST00000498810	TRAV8-6	A0A0B4J262	113 aa		7.31	□□□□□ -1.24
CDK11A-222	ENST00000498810	C16orf90	A8MZG2	172 aa		7.31	□□□□□ -1.24
CDK11A-222	ENST00000498810	RHOD	O00212	210 aa		7.31	□□□□□ -1.24
CDK11A-222	ENST00000498810	C1QB	P02746	253 aa		7.31	□□□□□ -1.24
CDK11A-222	ENST00000498810	LINC00315	P59091	139 aa		7.31	□□□□□ -1.24
CDK11A-222	ENST00000498810	SLC51B	Q86UW2	128 aa		7.31	□□□□□ -1.24
CDK11A-222	ENST00000498810	BAGE2	Q86Y30	109 aa		7.31	□□□□□ -1.24
CDK11A-222	ENST00000498810	WFDC10B	Q8IUB3	73 aa		7.31	□□□□□ -1.24
CDK11A-222	ENST00000498810	SLC25A29	Q8N8R3	303 aa		7.31	□□□□□ -1.24
CDK11A-222	ENST00000498810	KRTAP1-5	Q9BYS1	174 aa		7.31	□□□□□ -1.24
CDK11A-222	ENST00000498810	IL36B	Q9NZH7	164 aa		7.31	□□□□□ -1.24
CDK11A-222	ENST00000498810	TRBV6-1	A0A0K0K1D8	114 aa		7.3	□□□□□ -1.24
CDK11A-222	ENST00000498810	TRBV6-4	A0A1B0GX49	114 aa		7.3	□□□□□ -1.24
CDK11A-222	ENST00000498810	KRBOX1	C9JBD0	128 aa		7.3	□□□□□ -1.24
CDK11A-222	ENST00000498810	ARMS2	P0C7Q2	107 aa		7.3	□□□□□ -1.24
CDK11A-222	ENST00000498810	BTF3	P20290	206 aa	Known RBP	7.3	□□□□□ -1.24
CDK11A-222	ENST00000498810	NFE4	Q86UQ8	179 aa		7.3	□□□□□ -1.24
CDK11A-222	ENST00000498810	ZFP82	Q8N141	532 aa		7.3	□□□□□ -1.24
CDK11A-222	ENST00000498810	C10orf126	Q8N4M7	172 aa		7.3	□□□□□ -1.24
CDK11A-222	ENST00000498810	PARL	Q9H300	379 aa		7.3	□□□□□ -1.24
CDK11A-222	ENST00000498810	FAT2	Q9NYQ8	4349 aa		7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810	GAGE12J	A6NER3	117 aa		7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810	CRYGD	P07320	174 aa		7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810	ERVFC1-1	P60608	527 aa		7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810	GAGE1	Q13065	139 aa		7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810	GAGE4	Q13068	117 aa		7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810	GAGE5	Q13069	117 aa		7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810	ZNF674	Q2M3X9	581 aa		7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810	GAGE13	Q4V321	117 aa		7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810	ZFP2	Q6ZN57	461 aa		7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810	ZNF575	Q86XF7	245 aa		7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810	ATP6V0E2	Q8NHE4	81 aa		7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810	PTH2	Q96A98	100 aa		7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810	DAZAP1	Q96EP5	407 aa	Known RBP	7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810	KRTAP17-1	Q9BYP8	105 aa		7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810	DNAH17	Q9UFH2	4485 aa		7.29	□□□□□ -1.24
CDK11A-222	ENST00000498810		A0A087WWL8	130 aa		7.28	□□□□□ -1.24
CDK11A-222	ENST00000498810	PSCA	O43653	123 aa		7.28	□□□□□ -1.24
CDK11A-222	ENST00000498810	RPL35	P42766	123 aa	Known RBP	7.28	□□□□□ -1.24
CDK11A-222	ENST00000498810	SULT1A2	P50226	295 aa		7.28	□□□□□ -1.24
CDK11A-222	ENST00000498810	ZNF56	Q15929	161 aa		7.28	□□□□□ -1.24
CDK11A-222	ENST00000498810	PIK3CD-AS1	Q5SR53	167 aa		7.28	□□□□□ -1.24
CDK11A-222	ENST00000498810	IGHV3-38	A0A0C4DH36	116 aa		7.27	□□□□□ -1.25
CDK11A-222	ENST00000498810		K7EP13	123 aa		7.27	□□□□□ -1.25
CDK11A-222	ENST00000498810	PDE6D	O43924	150 aa		7.27	□□□□□ -1.25
CDK11A-222	ENST00000498810	GNG4	P50150	75 aa		7.27	□□□□□ -1.25
CDK11A-222	ENST00000498810	CRIP1	P50238	77 aa		7.27	□□□□□ -1.25
CDK11A-222	ENST00000498810	RPL19	P84098	196 aa	Known RBP	7.27	□□□□□ -1.25
CDK11A-222	ENST00000498810	MEF2B	Q02080	365 aa	Predicted RBP	7.27	□□□□□ -1.25
CDK11A-222	ENST00000498810	CENPW	Q5EE01	88 aa		7.27	□□□□□ -1.25
CDK11A-222	ENST00000498810	SPANXN1	Q5VSR9	72 aa		7.27	□□□□□ -1.25
CDK11A-222	ENST00000498810		Q6ZNX1	250 aa		7.27	□□□□□ -1.25
CDK11A-222	ENST00000498810	COX8C	Q7Z4L0	72 aa		7.27	□□□□□ -1.25
CDK11A-222	ENST00000498810	SPATA12	Q7Z6I5	190 aa		7.27	□□□□□ -1.25
CDK11A-222	ENST00000498810	TPPP3	Q9BW30	176 aa		7.27	□□□□□ -1.25
CDK11A-222	ENST00000498810	JPT2	Q9H910	190 aa		7.27	□□□□□ -1.25
CDK11A-222	ENST00000498810	MSRB1	Q9NZV6	116 aa		7.27	□□□□□ -1.25
CDK11A-222	ENST00000498810	TRAV1-1	A0A0B4J248	108 aa		7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810	IGHV3-30	P01768	117 aa		7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810	IGHV3-33	P01772	117 aa		7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810	SMIM17	P0DL12	118 aa		7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810	IGHV3-30-3	P0DP02	117 aa		7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810	IGHV3-30-5	P0DP03	117 aa		7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810	SST	P61278	116 aa		7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810	CCL20	P78556	96 aa		7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810	DNLZ	Q5SXM8	178 aa		7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810	KCNIP4	Q6PIL6	250 aa		7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810	DERL1	Q9BUN8	251 aa		7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810	GTSF1L	Q9H1H1	148 aa		7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810		Q9HAA7	133 aa		7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810	MED9	Q9NWA0	146 aa		7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810	URGCP-MRPS24	S4R325	110 aa		7.26	□□□□□ -1.25
CDK11A-222	ENST00000498810	XKRY2	A2RUG3	117 aa		7.25	□□□□□ -1.25
CDK11A-222	ENST00000498810		F5H697	171 aa		7.25	□□□□□ -1.25
CDK11A-222	ENST00000498810	DNAH10OS	P0CZ25	163 aa		7.25	□□□□□ -1.25
CDK11A-222	ENST00000498810	BCL2	P10415	239 aa		7.25	□□□□□ -1.25
CDK11A-222	ENST00000498810	TAGLN2	P37802	199 aa	Known RBP	7.25	□□□□□ -1.25
CDK11A-222	ENST00000498810	TIRAP	P58753	221 aa		7.25	□□□□□ -1.25
CDK11A-222	ENST00000498810	LELP1	Q5T871	98 aa		7.25	□□□□□ -1.25
CDK11A-222	ENST00000498810	C11orf52	Q96A22	123 aa		7.25	□□□□□ -1.25
CDK11A-222	ENST00000498810	SFRP2	Q96HF1	295 aa		7.25	□□□□□ -1.25
CDK11A-222	ENST00000498810	SAMD10	Q9BYL1	202 aa		7.25	□□□□□ -1.25
CDK11A-222	ENST00000498810	BIN3	Q9NQY0	253 aa		7.25	□□□□□ -1.25
CDK11A-222	ENST00000498810	CXCL1	P09341	107 aa		7.24	□□□□□ -1.25
CDK11A-222	ENST00000498810	RPL36A	P83881	106 aa	Known RBP	7.24	□□□□□ -1.25
CDK11A-222	ENST00000498810	LINC01556	Q5JQF7	62 aa		7.24	□□□□□ -1.25
CDK11A-222	ENST00000498810	ALKAL2	Q6UX46	152 aa		7.24	□□□□□ -1.25
CDK11A-222	ENST00000498810	C9orf62	Q8N4C0	152 aa		7.24	□□□□□ -1.25
CDK11A-222	ENST00000498810	C14orf178	Q8N769	122 aa	Predicted RBP	7.24	□□□□□ -1.25
CDK11A-222	ENST00000498810	OR2D3	Q8NGH3	330 aa		7.24	□□□□□ -1.25
CDK11A-222	ENST00000498810	RPL36AL	Q969Q0	106 aa	Known RBP	7.24	□□□□□ -1.25
CDK11A-222	ENST00000498810	AP1S3	Q96PC3	154 aa		7.24	□□□□□ -1.25
CDK11A-222	ENST00000498810	VAX2	Q9UIW0	290 aa		7.24	□□□□□ -1.25
CDK11A-222	ENST00000498810	PKD1	P98161	4303 aa		7.23	□□□□□ -1.25
CDK11A-222	ENST00000498810	PKHD1	P08F94	4074 aa		7.23	□□□□□ -1.25
CDK11A-222	ENST00000498810		A0A087WWC5	75 aa		7.23	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms