RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 A0A087WWC5 75 aa7.31□□□□□ -1.24
LSAMP-206ENST00000498645 KRBOX1C9JBD0 128 aa7.31□□□□□ -1.24
LSAMP-206ENST00000498645 M0R381 172 aa7.31□□□□□ -1.24
LSAMP-206ENST00000498645 CRIP1P50238 77 aa7.31□□□□□ -1.24
LSAMP-206ENST00000498645 LINC01620Q4KN68 170 aa7.31□□□□□ -1.24
LSAMP-206ENST00000498645 PIK3CD-AS1Q5SR53 167 aa7.31□□□□□ -1.24
LSAMP-206ENST00000498645 FAM162BQ5T6X4 162 aa7.31□□□□□ -1.24
LSAMP-206ENST00000498645 UFSP1Q6NVU6 142 aa7.31□□□□□ -1.24
LSAMP-206ENST00000498645 BAALCQ8WXS3 180 aa7.31□□□□□ -1.24
LSAMP-206ENST00000498645 HIST1H2BAQ96A08 127 aa7.31□□□□□ -1.24
LSAMP-206ENST00000498645 NKX6-2Q9C056 277 aaPredicted RBP7.31□□□□□ -1.24
LSAMP-206ENST00000498645 BATF3Q9NR55 127 aa7.31□□□□□ -1.24
LSAMP-206ENST00000498645 PHLDA3Q9Y5J5 127 aa7.31□□□□□ -1.24
LSAMP-206ENST00000498645 IGKV2D-24A0A075B6R9 120 aa7.3□□□□□ -1.24
LSAMP-206ENST00000498645 TPT1P13693 172 aaKnown RBP7.3□□□□□ -1.24
LSAMP-206ENST00000498645 CST9LP1Q5W188 147 aa7.3□□□□□ -1.24
LSAMP-206ENST00000498645 FMC1Q96HJ9 113 aa7.3□□□□□ -1.24
LSAMP-206ENST00000498645 DNAJC30Q96LL9 226 aa7.3□□□□□ -1.24
LSAMP-206ENST00000498645 KLK12Q9UKR0 248 aa7.3□□□□□ -1.24
LSAMP-206ENST00000498645 ZFP30Q9Y2G7 519 aa7.3□□□□□ -1.24
LSAMP-206ENST00000498645 ARPC5O15511 151 aa7.29□□□□□ -1.24
LSAMP-206ENST00000498645 AKR1C3P42330 323 aa7.29□□□□□ -1.24
LSAMP-206ENST00000498645 STOML3Q8TAV4 291 aa7.29□□□□□ -1.24
LSAMP-206ENST00000498645 RMI2Q96E14 147 aa7.29□□□□□ -1.24
LSAMP-206ENST00000498645 SFRP2Q96HF1 295 aa7.29□□□□□ -1.24
LSAMP-206ENST00000498645 A0A087WX48 190 aa7.28□□□□□ -1.24
LSAMP-206ENST00000498645 A0A1B0GV50 99 aa7.28□□□□□ -1.24
LSAMP-206ENST00000498645 RBFOX3A6NFN3 312 aa7.28□□□□□ -1.24
LSAMP-206ENST00000498645 J3QL48 77 aa7.28□□□□□ -1.24
LSAMP-206ENST00000498645 C1QBP02746 253 aa7.28□□□□□ -1.24
LSAMP-206ENST00000498645 PLA2G1BP04054 148 aaKnown RBP7.28□□□□□ -1.24
LSAMP-206ENST00000498645 DNLZQ5SXM8 178 aa7.28□□□□□ -1.24
LSAMP-206ENST00000498645 KCNIP4Q6PIL6 250 aa7.28□□□□□ -1.24
LSAMP-206ENST00000498645 NIT1Q86X76 327 aa7.28□□□□□ -1.24
LSAMP-206ENST00000498645 ZFP82Q8N141 532 aa7.28□□□□□ -1.24
LSAMP-206ENST00000498645 LINC00528Q8N1L1 170 aa7.28□□□□□ -1.24
LSAMP-206ENST00000498645 UBE2WQ96B02 151 aa7.28□□□□□ -1.24
LSAMP-206ENST00000498645 COX11Q9Y6N1 276 aa7.28□□□□□ -1.24
LSAMP-206ENST00000498645 LTAP01374 205 aa7.27□□□□□ -1.25
LSAMP-206ENST00000498645 SEC11BP0C7V7 166 aa7.27□□□□□ -1.25
LSAMP-206ENST00000498645 FHITP49789 147 aa7.27□□□□□ -1.25
LSAMP-206ENST00000498645 RPL36AP83881 106 aaKnown RBP7.27□□□□□ -1.25
LSAMP-206ENST00000498645 ZNF674Q2M3X9 581 aa7.27□□□□□ -1.25
LSAMP-206ENST00000498645 LINC01559Q495D7 138 aa7.27□□□□□ -1.25
LSAMP-206ENST00000498645 RPL36ALQ969Q0 106 aaKnown RBP7.27□□□□□ -1.25
LSAMP-206ENST00000498645 TMEM262E9PQX1 116 aa7.26□□□□□ -1.25
LSAMP-206ENST00000498645 G3V3Q6 166 aa7.26□□□□□ -1.25
LSAMP-206ENST00000498645 SMLR1H3BR10 107 aa7.26□□□□□ -1.25
LSAMP-206ENST00000498645 PAGE4O60829 102 aa7.26□□□□□ -1.25
LSAMP-206ENST00000498645 RPL19P84098 196 aaKnown RBP7.26□□□□□ -1.25
LSAMP-206ENST00000498645 ZNF56Q15929 161 aa7.26□□□□□ -1.25
LSAMP-206ENST00000498645 Q6ZSA8 131 aa7.26□□□□□ -1.25
LSAMP-206ENST00000498645 COX8CQ7Z4L0 72 aa7.26□□□□□ -1.25
LSAMP-206ENST00000498645 CYTL1Q9NRR1 136 aa7.26□□□□□ -1.25
LSAMP-206ENST00000498645 TRBV7-3A0A075B6L6 115 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 MUC21A0A0G2JKD1 596 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 TRBV10-1A0A0K0K1A3 114 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 TRBV6-1A0A0K0K1D8 114 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 MUC21A0A140T8X8 626 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 UBE2D3P61077 147 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 SSTP61278 116 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 UBE2D2P62837 147 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 ELOBQ15370 118 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 SCXQ7RTU7 201 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 C15orf54Q8N8G6 183 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 Q8N976 141 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 OR10AG1Q8NH19 301 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 FAM213BQ8TBF2 198 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 SFT2D1Q8WV19 159 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 TCEAL7Q9BRU2 100 aa7.25□□□□□ -1.25
LSAMP-206ENST00000498645 SCO2A0A1W2PP80 73 aa7.24□□□□□ -1.25
LSAMP-206ENST00000498645 PFDN1O60925 122 aa7.24□□□□□ -1.25
LSAMP-206ENST00000498645 CRPP02741 224 aa7.24□□□□□ -1.25
LSAMP-206ENST00000498645 PRR27Q6MZM9 219 aa7.24□□□□□ -1.25
LSAMP-206ENST00000498645 CHCHD7Q9BUK0 85 aa7.24□□□□□ -1.25
LSAMP-206ENST00000498645 F5H697 171 aa7.23□□□□□ -1.25
LSAMP-206ENST00000498645 RAB4BP61018 213 aa7.23□□□□□ -1.25
LSAMP-206ENST00000498645 RGS21Q2M5E4 152 aa7.23□□□□□ -1.25
LSAMP-206ENST00000498645 SPANXN1Q5VSR9 72 aa7.23□□□□□ -1.25
LSAMP-206ENST00000498645 NEXN-AS1Q8NBZ9 246 aa7.23□□□□□ -1.25
LSAMP-206ENST00000498645 CHCHD5Q9BSY4 110 aa7.23□□□□□ -1.25
LSAMP-206ENST00000498645 C1orf43Q9BWL3 253 aa7.23□□□□□ -1.25
LSAMP-206ENST00000498645 ZNF471Q9BX82 626 aaPredicted RBP7.23□□□□□ -1.25
LSAMP-206ENST00000498645 DNAH8Q96JB1 4490 aa7.23□□□□□ -1.25
LSAMP-206ENST00000498645 TRBV6-8A0A0A6YYG3 113 aa7.22□□□□□ -1.25
LSAMP-206ENST00000498645 HLA-DQA1P01909 254 aa7.22□□□□□ -1.25
LSAMP-206ENST00000498645 ANGP03950 147 aaKnown RBP7.22□□□□□ -1.25
LSAMP-206ENST00000498645 Q0VG73 95 aa7.22□□□□□ -1.25
LSAMP-206ENST00000498645 MPV17L2Q567V2 206 aa7.22□□□□□ -1.25
LSAMP-206ENST00000498645 BAGE2Q86Y30 109 aa7.22□□□□□ -1.25
LSAMP-206ENST00000498645 S100A9P06702 114 aaKnown RBP7.21□□□□□ -1.26
LSAMP-206ENST00000498645 ATRAIDQ6UW56 229 aa7.21□□□□□ -1.26
LSAMP-206ENST00000498645 CLPSL2Q6UWE3 100 aa7.21□□□□□ -1.26
LSAMP-206ENST00000498645 ENHOQ6UWT2 76 aa7.21□□□□□ -1.26
LSAMP-206ENST00000498645 KCNRGQ8N5I3 272 aa7.21□□□□□ -1.26
LSAMP-206ENST00000498645 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.21□□□□□ -1.26
LSAMP-206ENST00000498645 OR10G8Q8NGN5 311 aa7.21□□□□□ -1.26
LSAMP-206ENST00000498645 DEFB104AQ8WTQ1 72 aa7.21□□□□□ -1.26
LSAMP-206ENST00000498645 CHAC1Q9BUX1 264 aa7.21□□□□□ -1.26
LSAMP-206ENST00000498645 KANTRA0A1W2PQU2 76 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms