RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 PHLDA1Q8WV24 401 aaPredicted RBP9.59□□□□□ -0.87
CPNE1-227ENST00000498056 C18orf15Q96N68 181 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 CNFNQ9BYD5 112 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 SAMD10Q9BYL1 202 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 URGCP-MRPS24S4R325 110 aa9.59□□□□□ -0.87
CPNE1-227ENST00000498056 HOXA5P20719 270 aa9.58□□□□□ -0.88
CPNE1-227ENST00000498056 FOXA3P55318 350 aaPredicted RBP9.58□□□□□ -0.88
CPNE1-227ENST00000498056 RIGQ13278 110 aa9.58□□□□□ -0.88
CPNE1-227ENST00000498056 ZFAND6Q6FIF0 208 aa9.58□□□□□ -0.88
CPNE1-227ENST00000498056 C14orf178Q8N769 122 aaPredicted RBP9.58□□□□□ -0.88
CPNE1-227ENST00000498056 POM121L12Q8N7R1 296 aa9.58□□□□□ -0.88
CPNE1-227ENST00000498056 MUC7Q8TAX7 377 aa9.58□□□□□ -0.88
CPNE1-227ENST00000498056 IGHV4-4A0A075B6R2 117 aa9.57□□□□□ -0.88
CPNE1-227ENST00000498056 NUPR2A6NF83 97 aa9.57□□□□□ -0.88
CPNE1-227ENST00000498056 ATRAIDQ6UW56 229 aa9.57□□□□□ -0.88
CPNE1-227ENST00000498056 SMIM15Q7Z3B0 74 aa9.57□□□□□ -0.88
CPNE1-227ENST00000498056 A0A0J9YY99 117 aa9.56□□□□□ -0.88
CPNE1-227ENST00000498056 EVI2AP22794 236 aa9.56□□□□□ -0.88
CPNE1-227ENST00000498056 CAMPP49913 170 aa9.56□□□□□ -0.88
CPNE1-227ENST00000498056 HBBP68871 147 aa9.56□□□□□ -0.88
CPNE1-227ENST00000498056 WDR73Q6P4I2 378 aa9.56□□□□□ -0.88
CPNE1-227ENST00000498056 BTF3L4Q96K17 158 aa9.56□□□□□ -0.88
CPNE1-227ENST00000498056 IMMP2LQ96T52 175 aa9.56□□□□□ -0.88
CPNE1-227ENST00000498056 DPH3P1Q9H4G8 78 aa9.56□□□□□ -0.88
CPNE1-227ENST00000498056 TMEM242Q9NWH2 141 aa9.56□□□□□ -0.88
CPNE1-227ENST00000498056 TRAV26-1A0A087WT03 109 aa9.55□□□□□ -0.88
CPNE1-227ENST00000498056 F5H697 171 aa9.55□□□□□ -0.88
CPNE1-227ENST00000498056 CRYGDP07320 174 aa9.55□□□□□ -0.88
CPNE1-227ENST00000498056 TMEM88Q6PEY1 159 aa9.55□□□□□ -0.88
CPNE1-227ENST00000498056 ATP5L2Q7Z4Y8 100 aa9.55□□□□□ -0.88
CPNE1-227ENST00000498056 A0A1B0GW15 77 aa9.54□□□□□ -0.88
CPNE1-227ENST00000498056 CIDEAO60543 219 aa9.54□□□□□ -0.88
CPNE1-227ENST00000498056 S100A8P05109 93 aa9.54□□□□□ -0.88
CPNE1-227ENST00000498056 FHL2Q14192 279 aa9.54□□□□□ -0.88
CPNE1-227ENST00000498056 UFSP1Q6NVU6 142 aa9.54□□□□□ -0.88
CPNE1-227ENST00000498056 ZFP2Q6ZN57 461 aa9.54□□□□□ -0.88
CPNE1-227ENST00000498056 CBLN2Q8IUK8 224 aa9.54□□□□□ -0.88
CPNE1-227ENST00000498056 STARD9Q9P2P6 4700 aa9.54□□□□□ -0.88
CPNE1-227ENST00000498056 TRAV9-1A0A075B6T8 112 aa9.53□□□□□ -0.88
CPNE1-227ENST00000498056 A0A1B0GXF2 115 aa9.53□□□□□ -0.88
CPNE1-227ENST00000498056 IGLL5B9A064 214 aa9.53□□□□□ -0.88
CPNE1-227ENST00000498056 K7EQD1 137 aa9.53□□□□□ -0.88
CPNE1-227ENST00000498056 PAX4O43316 350 aa9.53□□□□□ -0.88
CPNE1-227ENST00000498056 GATA1P15976 413 aaPredicted RBP9.53□□□□□ -0.88
CPNE1-227ENST00000498056 RAB4BP61018 213 aa9.53□□□□□ -0.88
CPNE1-227ENST00000498056 RHOHQ15669 191 aa9.53□□□□□ -0.88
CPNE1-227ENST00000498056 CEMP1Q6PRD7 247 aaPredicted RBP9.53□□□□□ -0.88
CPNE1-227ENST00000498056 PRO0255Q9UI72 69 aa9.53□□□□□ -0.88
CPNE1-227ENST00000498056 KLK5Q9Y337 293 aaPredicted RBP9.53□□□□□ -0.88
CPNE1-227ENST00000498056 CRYBA4P53673 196 aa9.52□□□□□ -0.89
CPNE1-227ENST00000498056 AMN1Q8IY45 258 aa9.52□□□□□ -0.89
CPNE1-227ENST00000498056 SLC25A29Q8N8R3 303 aa9.52□□□□□ -0.89
CPNE1-227ENST00000498056 TMEM191AQ9H0A3 160 aa9.52□□□□□ -0.89
CPNE1-227ENST00000498056 HHLA3Q9XRX5 114 aa9.52□□□□□ -0.89
CPNE1-227ENST00000498056 KIF25-AS1Q9Y6Z4 181 aa9.52□□□□□ -0.89
CPNE1-227ENST00000498056 TRAV26-2A0A0B4J265 109 aa9.51□□□□□ -0.89
CPNE1-227ENST00000498056 NUDT3O95989 172 aa9.51□□□□□ -0.89
CPNE1-227ENST00000498056 S100A1P23297 94 aa9.51□□□□□ -0.89
CPNE1-227ENST00000498056 SLAQ13239 276 aa9.51□□□□□ -0.89
CPNE1-227ENST00000498056 SUMO4Q6EEV6 95 aa9.51□□□□□ -0.89
CPNE1-227ENST00000498056 Q6ZSN1 163 aa9.51□□□□□ -0.89
CPNE1-227ENST00000498056 PRADC1Q9BSG0 188 aa9.51□□□□□ -0.89
CPNE1-227ENST00000498056 TGIF2-C20orf24A0A0A6YYL0 155 aa9.5□□□□□ -0.89
CPNE1-227ENST00000498056 LOC100131303A0A0U1RQF7 123 aa9.5□□□□□ -0.89
CPNE1-227ENST00000498056 TRBV6-4A0A1B0GX49 114 aa9.5□□□□□ -0.89
CPNE1-227ENST00000498056 P0DMU3 169 aa9.5□□□□□ -0.89
CPNE1-227ENST00000498056 FAM231AP0DMU4 169 aa9.5□□□□□ -0.89
CPNE1-227ENST00000498056 FAM231CP0DMU5 169 aa9.5□□□□□ -0.89
CPNE1-227ENST00000498056 GYPEP15421 78 aa9.5□□□□□ -0.89
CPNE1-227ENST00000498056 LINC00315P59091 139 aa9.5□□□□□ -0.89
CPNE1-227ENST00000498056 ELOBQ15370 118 aa9.5□□□□□ -0.89
CPNE1-227ENST00000498056 SMCO4Q9NRQ5 59 aa9.5□□□□□ -0.89
CPNE1-227ENST00000498056 ICOSQ9Y6W8 199 aa9.5□□□□□ -0.89
CPNE1-227ENST00000498056 DYNC2H1Q8NCM8 4307 aaKnown RBP9.5□□□□□ -0.89
CPNE1-227ENST00000498056 H7C1H1 209 aa9.49□□□□□ -0.89
CPNE1-227ENST00000498056 SCO1O75880 301 aa9.49□□□□□ -0.89
CPNE1-227ENST00000498056 NCR2O95944 276 aa9.49□□□□□ -0.89
CPNE1-227ENST00000498056 VSIG2Q96IQ7 327 aa9.49□□□□□ -0.89
CPNE1-227ENST00000498056 FAM210BQ96KR6 192 aa9.49□□□□□ -0.89
CPNE1-227ENST00000498056 CSMD3Q7Z407 3707 aa9.49□□□□□ -0.89
CPNE1-227ENST00000498056 C3orf84H3BNL1 204 aa9.48□□□□□ -0.89
CPNE1-227ENST00000498056 SRIP30626 198 aa9.48□□□□□ -0.89
CPNE1-227ENST00000498056 RASL11AQ6T310 242 aa9.48□□□□□ -0.89
CPNE1-227ENST00000498056 C15orf53Q8NAA6 179 aa9.48□□□□□ -0.89
CPNE1-227ENST00000498056 RNF185Q96GF1 192 aa9.48□□□□□ -0.89
CPNE1-227ENST00000498056 A0A096LPF7 62 aa9.47□□□□□ -0.89
CPNE1-227ENST00000498056 GAGE12JA6NER3 117 aa9.47□□□□□ -0.89
CPNE1-227ENST00000498056 SMKR1H3BMG3 65 aa9.47□□□□□ -0.89
CPNE1-227ENST00000498056 GAGE1Q13065 139 aa9.47□□□□□ -0.89
CPNE1-227ENST00000498056 GAGE4Q13068 117 aa9.47□□□□□ -0.89
CPNE1-227ENST00000498056 GAGE5Q13069 117 aa9.47□□□□□ -0.89
CPNE1-227ENST00000498056 GAGE13Q4V321 117 aa9.47□□□□□ -0.89
CPNE1-227ENST00000498056 CASC10Q5T4H9 136 aa9.47□□□□□ -0.89
CPNE1-227ENST00000498056 FAM104BQ5XKR9 115 aa9.47□□□□□ -0.89
CPNE1-227ENST00000498056 TMEM136Q6ZRR5 245 aa9.47□□□□□ -0.89
CPNE1-227ENST00000498056 GATD1Q8NB37 220 aa9.47□□□□□ -0.89
CPNE1-227ENST00000498056 TRBV24-1A0A075B6N3 115 aa9.46□□□□□ -0.9
CPNE1-227ENST00000498056 TRBV10-1A0A0K0K1A3 114 aa9.46□□□□□ -0.9
CPNE1-227ENST00000498056 H3BNG1 76 aa9.46□□□□□ -0.9
CPNE1-227ENST00000498056 RAB4AP20338 218 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms