RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 TRGV4A0A0C4DH28 118 aa10.88□□□□□ -0.67
VIM-208ENST00000497849 APOC3P02656 99 aa10.88□□□□□ -0.67
VIM-208ENST00000497849 RNASE4P34096 147 aaKnown RBP10.88□□□□□ -0.67
VIM-208ENST00000497849 LINC01620Q4KN68 170 aa10.88□□□□□ -0.67
VIM-208ENST00000497849 LINC01556Q5JQF7 62 aa10.88□□□□□ -0.67
VIM-208ENST00000497849 ZFAND2AQ8N6M9 145 aa10.88□□□□□ -0.67
VIM-208ENST00000497849 ZNF479Q96JC4 524 aa10.88□□□□□ -0.67
VIM-208ENST00000497849 K7EQM0 130 aa10.87□□□□□ -0.67
VIM-208ENST00000497849 S100A9P06702 114 aaKnown RBP10.87□□□□□ -0.67
VIM-208ENST00000497849 RPL35P42766 123 aaKnown RBP10.87□□□□□ -0.67
VIM-208ENST00000497849 FLI1Q01543 452 aaPredicted RBP10.87□□□□□ -0.67
VIM-208ENST00000497849 DERL1Q9BUN8 251 aa10.87□□□□□ -0.67
VIM-208ENST00000497849 SERTM2A0A1B0GWG4 89 aa10.86□□□□□ -0.67
VIM-208ENST00000497849 ORM1P02763 201 aa10.86□□□□□ -0.67
VIM-208ENST00000497849 GPX1P07203 203 aa10.86□□□□□ -0.67
VIM-208ENST00000497849 CRISP2P16562 243 aa10.86□□□□□ -0.67
VIM-208ENST00000497849 TMEM241Q24JQ0 296 aa10.86□□□□□ -0.67
VIM-208ENST00000497849 SVBPQ8N300 66 aa10.86□□□□□ -0.67
VIM-208ENST00000497849 NAT8Q9UHE5 227 aa10.86□□□□□ -0.67
VIM-208ENST00000497849 TNXBP22105 4242 aa10.85□□□□□ -0.67
VIM-208ENST00000497849 UBE2G1P62253 170 aa10.85□□□□□ -0.67
VIM-208ENST00000497849 TMEM75Q8N9X5 138 aa10.85□□□□□ -0.67
VIM-208ENST00000497849 FMC1Q96HJ9 113 aa10.85□□□□□ -0.67
VIM-208ENST00000497849 CHAC1Q9BUX1 264 aa10.85□□□□□ -0.67
VIM-208ENST00000497849 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.84□□□□□ -0.67
VIM-208ENST00000497849 IGHV1OR15-1A0A075B7D0 117 aa10.84□□□□□ -0.67
VIM-208ENST00000497849 C9JCJ5 164 aa10.84□□□□□ -0.67
VIM-208ENST00000497849 MT1HL1P0DM35 61 aa10.84□□□□□ -0.67
VIM-208ENST00000497849 ZNF80P51504 273 aaPredicted RBP10.84□□□□□ -0.67
VIM-208ENST00000497849 HNRNPA3P51991 378 aaKnown RBP10.84□□□□□ -0.67
VIM-208ENST00000497849 TMEM183BQ1AE95 376 aa10.84□□□□□ -0.67
VIM-208ENST00000497849 Q86TA4 180 aa10.84□□□□□ -0.67
VIM-208ENST00000497849 CIRBP-AS1Q8TBR5 109 aa10.84□□□□□ -0.67
VIM-208ENST00000497849 LOC100131303A0A0U1RQF7 123 aa10.83□□□□□ -0.68
VIM-208ENST00000497849 M0R036 132 aa10.83□□□□□ -0.68
VIM-208ENST00000497849 LECT2O14960 151 aa10.83□□□□□ -0.68
VIM-208ENST00000497849 SNAPINO95295 136 aa10.83□□□□□ -0.68
VIM-208ENST00000497849 GNG4P50150 75 aa10.83□□□□□ -0.68
VIM-208ENST00000497849 TIRAPP58753 221 aa10.83□□□□□ -0.68
VIM-208ENST00000497849 PNRC1Q12796 327 aaPredicted RBP10.83□□□□□ -0.68
VIM-208ENST00000497849 CENPWQ5EE01 88 aa10.83□□□□□ -0.68
VIM-208ENST00000497849 NHLRC2Q8NBF2 726 aa10.83□□□□□ -0.68
VIM-208ENST00000497849 SDF2L1Q9HCN8 221 aa10.83□□□□□ -0.68
VIM-208ENST00000497849 TRBV20OR9-2A0A075B6H5 130 aa10.82□□□□□ -0.68
VIM-208ENST00000497849 TRBV6-1A0A0K0K1D8 114 aa10.82□□□□□ -0.68
VIM-208ENST00000497849 FBLL1A6NHQ2 334 aaKnown RBP10.82□□□□□ -0.68
VIM-208ENST00000497849 CLRN3Q8NCR9 226 aa10.82□□□□□ -0.68
VIM-208ENST00000497849 NDFIP1Q9BT67 221 aa10.82□□□□□ -0.68
VIM-208ENST00000497849 LENEPQ9Y5L5 61 aa10.82□□□□□ -0.68
VIM-208ENST00000497849 TRBV7-9A0A0J9YWB2 115 aa10.81□□□□□ -0.68
VIM-208ENST00000497849 RS1O15537 224 aa10.81□□□□□ -0.68
VIM-208ENST00000497849 IGHV3-30P01768 117 aa10.81□□□□□ -0.68
VIM-208ENST00000497849 IGHV3-33P01772 117 aa10.81□□□□□ -0.68
VIM-208ENST00000497849 IGHV3-30-3P0DP02 117 aa10.81□□□□□ -0.68
VIM-208ENST00000497849 IGHV3-30-5P0DP03 117 aa10.81□□□□□ -0.68
VIM-208ENST00000497849 ADIRFQ15847 76 aa10.81□□□□□ -0.68
VIM-208ENST00000497849 MUC21Q5SSG8 566 aa10.81□□□□□ -0.68
VIM-208ENST00000497849 BAGE2Q86Y30 109 aa10.81□□□□□ -0.68
VIM-208ENST00000497849 GCGP01275 180 aa10.8□□□□□ -0.68
VIM-208ENST00000497849 RPL23P62829 140 aaKnown RBP10.8□□□□□ -0.68
VIM-208ENST00000497849 SMUG1Q53HV7 270 aa10.8□□□□□ -0.68
VIM-208ENST00000497849 SAPCD1Q5SSQ6 148 aa10.8□□□□□ -0.68
VIM-208ENST00000497849 LINC01551Q86U37 167 aa10.8□□□□□ -0.68
VIM-208ENST00000497849 OCC1Q8TAD7 63 aa10.8□□□□□ -0.68
VIM-208ENST00000497849 RASL10AQ92737 203 aa10.8□□□□□ -0.68
VIM-208ENST00000497849 DAZAP1Q96EP5 407 aaKnown RBP10.8□□□□□ -0.68
VIM-208ENST00000497849 ZC2HC1AQ96GY0 325 aa10.8□□□□□ -0.68
VIM-208ENST00000497849 TM2D2Q9BX73 214 aa10.8□□□□□ -0.68
VIM-208ENST00000497849 PGPEP1LA6NFU8 196 aa10.79□□□□□ -0.68
VIM-208ENST00000497849 LTAP01374 205 aa10.79□□□□□ -0.68
VIM-208ENST00000497849 IGLV2-8P01709 118 aa10.79□□□□□ -0.68
VIM-208ENST00000497849 CRIP1P50238 77 aa10.79□□□□□ -0.68
VIM-208ENST00000497849 LAGE3Q14657 143 aa10.79□□□□□ -0.68
VIM-208ENST00000497849 RHEBQ15382 184 aa10.79□□□□□ -0.68
VIM-208ENST00000497849 SMIM12Q96EX1 92 aa10.79□□□□□ -0.68
VIM-208ENST00000497849 C11orf21Q9P2W6 132 aa10.79□□□□□ -0.68
VIM-208ENST00000497849 NAGKQ9UJ70 344 aa10.79□□□□□ -0.68
VIM-208ENST00000497849 ZFP30Q9Y2G7 519 aa10.79□□□□□ -0.68
VIM-208ENST00000497849 TRAV8-6A0A0B4J262 113 aa10.78□□□□□ -0.68
VIM-208ENST00000497849 B4DEV8 164 aa10.78□□□□□ -0.68
VIM-208ENST00000497849 MGST1P10620 155 aaKnown RBP10.78□□□□□ -0.68
VIM-208ENST00000497849 TDRG1Q3Y452 100 aa10.78□□□□□ -0.68
VIM-208ENST00000497849 OR10J3Q5JRS4 329 aa10.78□□□□□ -0.68
VIM-208ENST00000497849 Q6AWC8 147 aa10.78□□□□□ -0.68
VIM-208ENST00000497849 SH2D6Q7Z4S9 175 aa10.78□□□□□ -0.68
VIM-208ENST00000497849 C7orf77A4D0Y5 90 aa10.77□□□□□ -0.69
VIM-208ENST00000497849 K7EN84 100 aa10.77□□□□□ -0.69
VIM-208ENST00000497849 ATRAIDQ6UW56 229 aa10.77□□□□□ -0.69
VIM-208ENST00000497849 TMEM183AQ8IXX5 376 aa10.77□□□□□ -0.69
VIM-208ENST00000497849 ISOC2Q96AB3 205 aa10.77□□□□□ -0.69
VIM-208ENST00000497849 RPS10P5Q9NQ39 176 aa10.77□□□□□ -0.69
VIM-208ENST00000497849 BIN3Q9NQY0 253 aa10.77□□□□□ -0.69
VIM-208ENST00000497849 TRAV4A0A0B4J268 109 aa10.76□□□□□ -0.69
VIM-208ENST00000497849 TRAV21A0A0B4J279 112 aa10.76□□□□□ -0.69
VIM-208ENST00000497849 GNRH2O43555 120 aa10.76□□□□□ -0.69
VIM-208ENST00000497849 RPL37AP61513 92 aaKnown RBP10.76□□□□□ -0.69
VIM-208ENST00000497849 Q8N3U1 123 aa10.76□□□□□ -0.69
VIM-208ENST00000497849 MLST8Q9BVC4 326 aa10.76□□□□□ -0.69
VIM-208ENST00000497849 SH2D1AO60880 128 aa10.75□□□□□ -0.69
VIM-208ENST00000497849 MT-ND4LP03901 98 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms