RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 IL3RAP26951 378 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 CNTFRP26992 372 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 PPP1CCP36873 323 aaKnown RBP1.37□□□□□ -2.19
CBX3-208ENST00000497498 TAS2R45P59539 299 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 TMEM258P61165 79 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 RPS11P62280 158 aaKnown RBP eCLIP1.37□□□□□ -2.19
CBX3-208ENST00000497498 LAMTOR4Q0VGL1 99 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 FOXF1Q12946 379 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 MEIG1Q5JSS6 88 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 Q6AWC8 147 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 NOXRED1Q6NXP6 359 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 LCN15Q6UWW0 184 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 ATP5L2Q7Z4Y8 100 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 FAM19A5Q7Z5A7 132 aaPredicted RBP1.37□□□□□ -2.19
CBX3-208ENST00000497498 OOSP2Q86WS3 158 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 TMEM25Q86YD3 366 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 C10orf111Q8N326 155 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 OR8B12Q8NGG6 310 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 OR8B3Q8NGG8 313 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 OR5D14Q8NGL3 314 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 OR4C13Q8NGP0 309 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 OR1L8Q8NGR8 309 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 CLDND2Q8NHS1 167 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 ZNF563Q8TA94 476 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 LMX1AQ8TE12 382 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 SLC37A2Q8TED4 501 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 APOBEC3DQ96AK3 386 aaPredicted RBP1.37□□□□□ -2.19
CBX3-208ENST00000497498 CHCHD1Q96BP2 118 aaKnown RBP1.37□□□□□ -2.19
CBX3-208ENST00000497498 PLEKHB2Q96CS7 222 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 PGLYRP3Q96LB9 341 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 PRADC1Q9BSG0 188 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 SHANK2-AS3Q9BTD1 123 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 CHCHD7Q9BUK0 85 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 EMC6Q9BV81 110 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 OR2H1Q9GZK4 316 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 PBOV1Q9GZY1 135 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 LINC00574Q9H8X3 128 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 SND1-IT1Q9HBX3 110 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 IL36BQ9NZH7 164 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 HIGD1BQ9P298 99 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 GNG13Q9P2W3 67 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 ANAPC10Q9UM13 185 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 HIGD1AQ9Y241 93 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 ZNF443Q9Y2A4 671 aaPredicted RBP1.37□□□□□ -2.19
CBX3-208ENST00000497498 KLF12Q9Y4X4 402 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 TIMM9Q9Y5J7 89 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 MPC1Q9Y5U8 109 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 HSPG2P98160 4391 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 KMT2AQ03164 3969 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 CACNA1CQ13936 2221 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 TRIP11Q15643 1979 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 ABCA1O95477 2261 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 ANK1P16157 1881 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 DOCK6Q96HP0 2047 aa1.37□□□□□ -2.19
CBX3-208ENST00000497498 CEP192Q8TEP8 1941 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 C3orf85A0A1B0GTC6 90 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 CTXND1A0A1B0GTU2 59 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 FAM240AA0A1B0GVK7 77 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 TINCRA0A1B0GVN0 87 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 A0A1B0GX12 115 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 OR4C46A6NHA9 309 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 CEBPZOSA8MTT3 80 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 C9JCJ5 164 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 LINC01619G3V211 115 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 H3BUT2 72 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 K7EN84 100 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 M0R129 80 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 SDCBPO00560 298 aaPredicted RBP1.36□□□□□ -2.19
CBX3-208ENST00000497498 OVOL1O14753 267 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 UQCRQO14949 82 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 NPFFO15130 113 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 SSSCA1O60232 199 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 ZNF737O75373 536 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 KLF7O75840 302 aaPredicted RBP1.36□□□□□ -2.19
CBX3-208ENST00000497498 CPSF4O95639 269 aaKnown RBP1.36□□□□□ -2.19
CBX3-208ENST00000497498 IGKV1-39P01597 117 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 IGKV1D-39P04432 117 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 ACYP1P07311 99 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 SLC25A6P12236 298 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 CPMP14384 443 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 BLVRBP30043 206 aaPredicted RBP1.36□□□□□ -2.19
CBX3-208ENST00000497498 SCN1AP35498 2009 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 GLRXP35754 106 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 CSN1S1P47710 185 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 ZNF83P51522 516 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 RPL30P62888 115 aaKnown RBP1.36□□□□□ -2.19
CBX3-208ENST00000497498 PSG4Q00888 419 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 ZNF90Q03938 601 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 CATR1Q13166 79 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 IL15RAQ13261 267 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 IHHQ14623 411 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 RTL8BQ17RB0 113 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 RRN3P1Q2M238 152 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 CEACAM16Q2WEN9 425 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 TDRG1Q3Y452 100 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 C9orf153Q5TBE3 101 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 SPATA12Q7Z6I5 190 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 TRAPPC6BQ86SZ2 158 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 TEN1Q86WV5 123 aa1.36□□□□□ -2.19
CBX3-208ENST00000497498 C10orf126Q8N4M7 172 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 184.5 ms