RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 TSPOP30536 169 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 RNASE4P34096 147 aaKnown RBP3.87□□□□□ -1.79
GGPS1-208ENST00000497327 CTRLP40313 264 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 CDKN1BP46527 198 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 RPS10P46783 165 aaKnown RBP3.87□□□□□ -1.79
GGPS1-208ENST00000497327 RBMY1FQ15415 496 aaKnown RBP3.87□□□□□ -1.79
GGPS1-208ENST00000497327 RASL11AQ6T310 242 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 TMEM136Q6ZRR5 245 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 ATP5L2Q7Z4Y8 100 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 GATD1Q8NB37 220 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 PGLYRP4Q96LB8 373 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 MCRIP2Q9BUT9 160 aaKnown RBP3.87□□□□□ -1.79
GGPS1-208ENST00000497327 CNFNQ9BYD5 112 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 STAB1Q9NY15 2570 aa3.87□□□□□ -1.79
GGPS1-208ENST00000497327 VWFP04275 2813 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 IGHV4-4A0A075B6R2 117 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 TRAV12-2A0A075B6T6 113 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 TMSB15BA0A087X1C1 80 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 XKRY2A2RUG3 117 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 GRIFINA4D1Z8 144 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 SPINK4O60575 86 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 ARMS2P0C7Q2 107 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 IGLL1P15814 213 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 SPINK13Q1W4C9 94 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 COX19Q49B96 90 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 MRPL54Q6P161 138 aaKnown RBP3.86□□□□□ -1.79
GGPS1-208ENST00000497327 WDR73Q6P4I2 378 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 LYZL1Q6UWQ5 148 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 C12orf54Q6X4T0 127 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 C3orf56Q8N813 242 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 FER1L6-AS1Q8NA97 138 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 FRZBQ92765 325 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 LINC00467Q9BRT7 94 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 GNB1LQ9BYB4 327 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 WFDC10AQ9H1F0 79 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 AGRNO00468 2067 aa3.86□□□□□ -1.79
GGPS1-208ENST00000497327 IGHV1OR15-1A0A075B7D0 117 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 TRAV12-3A0A0B4J271 114 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 A0A1B0GUT8 65 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 A0A1B0GW15 77 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 C1orf196B1AJZ1 125 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 F2Z2F3 143 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 GNRH2O43555 120 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 HIST1H2BKO60814 126 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 MT-ND6P03923 174 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 HIST1H2BJP06899 126 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 OR5AL1P0C617 328 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 RNASE3P12724 160 aaKnown RBP3.85□□□□□ -1.79
GGPS1-208ENST00000497327 HIST1H2BOP23527 126 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 HIST1H2BBP33778 126 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 LINC01547P58512 204 aaPredicted RBP3.85□□□□□ -1.79
GGPS1-208ENST00000497327 FXYD7P58549 80 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 HIST1H2BDP58876 126 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 HIST1H2BCP62807 126 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 HBBP68871 147 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 HIST2H2BEQ16778 126 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.85□□□□□ -1.79
GGPS1-208ENST00000497327 MUC21Q5SSG8 566 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 ZNF493Q6ZR52 646 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 C1orf158Q8N1D5 194 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 DEFB125Q8N687 156 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 HIST1H2BHQ93079 126 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 HIST1H2BNQ99877 126 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 HIST1H2BMQ99879 126 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 C20orf144Q9BQM9 153 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 TP53TG3Q9ULZ0 132 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 TRAPPC1Q9Y5R8 145 aa3.85□□□□□ -1.79
GGPS1-208ENST00000497327 IGHV3-16A0A0C4DH30 117 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 SNURFLB1AK76 121 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 NXPH4O95158 308 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 HLA-DQA1P01909 254 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 TRGC1P0CF51 173 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 NTF3P20783 257 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 ASIPP42127 132 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 RAB5BP61020 215 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 EGFEM1PQ0D2K5 195 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 FABP9Q0Z7S8 132 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 SLAQ13239 276 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 RIGQ13278 110 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 COA6Q5JTJ3 125 aaKnown RBP3.84□□□□□ -1.79
GGPS1-208ENST00000497327 STHQ8IWL8 128 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 ZFP82Q8N141 532 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 CSNK1G2-AS1Q8NCQ2 148 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 OR10AG1Q8NH19 301 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 KCNS1Q96KK3 526 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 C9orf85Q96MD7 179 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 NAGKQ9UJ70 344 aa3.84□□□□□ -1.79
GGPS1-208ENST00000497327 MUC21A0A0G2JKD1 596 aa3.83□□□□□ -1.8
GGPS1-208ENST00000497327 MUC21A0A140T8X8 626 aa3.83□□□□□ -1.8
GGPS1-208ENST00000497327 C5orf52A6NGY3 159 aa3.83□□□□□ -1.8
GGPS1-208ENST00000497327 H3BVH4 76 aa3.83□□□□□ -1.8
GGPS1-208ENST00000497327 APCSP02743 223 aa3.83□□□□□ -1.8
GGPS1-208ENST00000497327 S100A8P05109 93 aa3.83□□□□□ -1.8
GGPS1-208ENST00000497327 CACNG7P62955 275 aa3.83□□□□□ -1.8
GGPS1-208ENST00000497327 MORN3Q6PF18 240 aaPredicted RBP3.83□□□□□ -1.8
GGPS1-208ENST00000497327 FAM159AQ6UWV7 190 aa3.83□□□□□ -1.8
GGPS1-208ENST00000497327 C11orf72Q8NBR9 251 aa3.83□□□□□ -1.8
GGPS1-208ENST00000497327 PTH2Q96A98 100 aa3.83□□□□□ -1.8
GGPS1-208ENST00000497327 RNF185Q96GF1 192 aa3.83□□□□□ -1.8
GGPS1-208ENST00000497327 TPPP3Q9BW30 176 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms