RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 GFRA4Q9GZZ7 299 aa4.32□□□□□ -1.72
HMGCL-206ENST00000496907 MDFICQ9P1T7 246 aa4.32□□□□□ -1.72
HMGCL-206ENST00000496907 M0R036 132 aa4.31□□□□□ -1.72
HMGCL-206ENST00000496907 SNAI2O43623 268 aa4.31□□□□□ -1.72
HMGCL-206ENST00000496907 MT-ND4LP03901 98 aa4.31□□□□□ -1.72
HMGCL-206ENST00000496907 TRGC1P0CF51 173 aa4.31□□□□□ -1.72
HMGCL-206ENST00000496907 SMIM17P0DL12 118 aa4.31□□□□□ -1.72
HMGCL-206ENST00000496907 RNASE3P12724 160 aaKnown RBP4.31□□□□□ -1.72
HMGCL-206ENST00000496907 NDUFA5Q16718 116 aa4.31□□□□□ -1.72
HMGCL-206ENST00000496907 SPANXN1Q5VSR9 72 aa4.31□□□□□ -1.72
HMGCL-206ENST00000496907 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.31□□□□□ -1.72
HMGCL-206ENST00000496907 FER1L6-AS1Q8NA97 138 aa4.31□□□□□ -1.72
HMGCL-206ENST00000496907 NHLRC2Q8NBF2 726 aa4.31□□□□□ -1.72
HMGCL-206ENST00000496907 FRZBQ92765 325 aa4.31□□□□□ -1.72
HMGCL-206ENST00000496907 SEC11CQ9BY50 192 aa4.31□□□□□ -1.72
HMGCL-206ENST00000496907 RPP21Q9H633 154 aaKnown RBP4.31□□□□□ -1.72
HMGCL-206ENST00000496907 SCRT2Q9NQ03 307 aa4.31□□□□□ -1.72
HMGCL-206ENST00000496907 C11orf21Q9P2W6 132 aa4.31□□□□□ -1.72
HMGCL-206ENST00000496907 PRO0255Q9UI72 69 aa4.31□□□□□ -1.72
HMGCL-206ENST00000496907 TRBV20OR9-2A0A075B6H5 130 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 IGHV4-4A0A075B6R2 117 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 TRGV4A0A0C4DH28 118 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 TMEM218A2RU14 115 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 F5H768 121 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 RS1O15537 224 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 PRM2P04554 102 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 S100A8P05109 93 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 SFTA3P0C7M3 94 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 FAM3BP58499 235 aaPredicted RBP4.3□□□□□ -1.72
HMGCL-206ENST00000496907 RPL23P62829 140 aaKnown RBP4.3□□□□□ -1.72
HMGCL-206ENST00000496907 Q6ZTC4 211 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 Q6ZTI0 123 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 OR10G8Q8NGN5 311 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 TSKUQ8WUA8 353 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 PCNPQ8WW12 178 aaKnown RBP4.3□□□□□ -1.72
HMGCL-206ENST00000496907 ISOC2Q96AB3 205 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 SFRP2Q96HF1 295 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 PRADC1Q9BSG0 188 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 CELA1Q9UNI1 258 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 HHLA3Q9XRX5 114 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 AGRNO00468 2067 aa4.3□□□□□ -1.72
HMGCL-206ENST00000496907 KMT2AQ03164 3969 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 TMSB15BA0A087X1C1 80 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 A0A1B0GW15 77 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 TRBV6-4A0A1B0GX49 114 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 GRIFINA4D1Z8 144 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 PGPEP1LA6NFU8 196 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 IGLL5B9A064 214 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 F8W036 122 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 H3BVH4 76 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 H7C1H1 209 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 IGLC6P0CF74 106 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 P0DMU3 169 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 FAM231AP0DMU4 169 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 FAM231CP0DMU5 169 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 HTN3P15516 51 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 ADIRFQ15847 76 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 MRPL23Q16540 153 aaKnown RBP4.29□□□□□ -1.72
HMGCL-206ENST00000496907 RNF212Q495C1 297 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 Q6ZQT7 251 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 COMMD7Q86VX2 200 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 BTF3L4Q96K17 158 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 CNFNQ9BYD5 112 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 CTDSP1Q9GZU7 261 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 MRPL16Q9NX20 251 aaKnown RBP4.29□□□□□ -1.72
HMGCL-206ENST00000496907 NAT8BQ9UHF3 227 aa4.29□□□□□ -1.72
HMGCL-206ENST00000496907 TRBV10-1A0A0K0K1A3 114 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 A0A1B0GUT8 65 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 C9JQL5 133 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 K7EN84 100 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 NXPH4O95158 308 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 PPP1R17O96001 155 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 CRYBA4P53673 196 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 CCL18P55774 89 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 RAB4BP61018 213 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 SRSF3P84103 164 aaKnown RBP4.28□□□□□ -1.72
HMGCL-206ENST00000496907 RIGQ13278 110 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 FHL2Q14192 279 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 RHOHQ15669 191 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 CFAP126Q5VTH2 177 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 LGALS9CQ6DKI2 356 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 LYZL1Q6UWQ5 148 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 AP1S3Q96PC3 154 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 IMMP2LQ96T52 175 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 RNASE7Q9H1E1 156 aaKnown RBP4.28□□□□□ -1.72
HMGCL-206ENST00000496907 TMEM242Q9NWH2 141 aa4.28□□□□□ -1.72
HMGCL-206ENST00000496907 TRAV26-1A0A087WT03 109 aa4.27□□□□□ -1.73
HMGCL-206ENST00000496907 K7EP13 123 aa4.27□□□□□ -1.73
HMGCL-206ENST00000496907 M0R381 172 aa4.27□□□□□ -1.73
HMGCL-206ENST00000496907 GATA1P15976 413 aaPredicted RBP4.27□□□□□ -1.73
HMGCL-206ENST00000496907 NTF3P20783 257 aa4.27□□□□□ -1.73
HMGCL-206ENST00000496907 CTRLP40313 264 aa4.27□□□□□ -1.73
HMGCL-206ENST00000496907 TWIST1Q15672 202 aa4.27□□□□□ -1.73
HMGCL-206ENST00000496907 ANKRD39Q53RE8 183 aa4.27□□□□□ -1.73
HMGCL-206ENST00000496907 TMEM97Q5BJF2 176 aa4.27□□□□□ -1.73
HMGCL-206ENST00000496907 KCNIP4Q6PIL6 250 aa4.27□□□□□ -1.73
HMGCL-206ENST00000496907 NEGR1Q7Z3B1 354 aa4.27□□□□□ -1.73
HMGCL-206ENST00000496907 ZNF575Q86XF7 245 aa4.27□□□□□ -1.73
HMGCL-206ENST00000496907 ZNF479Q96JC4 524 aa4.27□□□□□ -1.73
HMGCL-206ENST00000496907 DNAJC30Q96LL9 226 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms