RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 HUWE1Q7Z6Z7 4374 aaKnown RBP5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 COL7A1Q02388 2944 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 IGHV4-4A0A075B6R2 117 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 A0A087WWL8 130 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 TGIF2-C20orf24A0A0A6YYL0 155 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 TRGV4A0A0C4DH28 118 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 FAM231BA6NCW3 169 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 MGPP08493 103 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 OR5AL1P0C617 328 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 IGLC6P0CF74 106 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 FOXA3P55318 350 aaPredicted RBP5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 DAZ2Q13117 558 aaKnown RBP5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 FAM74A4Q5TZK3 123 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 WDR73Q6P4I2 378 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 CBLN2Q8IUK8 224 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 BTF3L4Q96K17 158 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 C9orf85Q96MD7 179 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 IMMP2LQ96T52 175 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 SSBP4Q9BWG4 385 aaPredicted RBP5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 TMEM242Q9NWH2 141 aa5.81□□□□□ -1.48
SMARCD3-215ENST00000496530 F5H768 121 aa5.8□□□□□ -1.48
SMARCD3-215ENST00000496530 SNAI2O43623 268 aa5.8□□□□□ -1.48
SMARCD3-215ENST00000496530 ATP5G1P05496 136 aa5.8□□□□□ -1.48
SMARCD3-215ENST00000496530 CXCL1P09341 107 aa5.8□□□□□ -1.48
SMARCD3-215ENST00000496530 TRGC1P0CF51 173 aa5.8□□□□□ -1.48
SMARCD3-215ENST00000496530 MED14OSP0DP75 135 aa5.8□□□□□ -1.48
SMARCD3-215ENST00000496530 LGALS9BQ3B8N2 356 aa5.8□□□□□ -1.48
SMARCD3-215ENST00000496530 LGALS9CQ6DKI2 356 aa5.8□□□□□ -1.48
SMARCD3-215ENST00000496530 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.8□□□□□ -1.48
SMARCD3-215ENST00000496530 LINC00476Q8WZB0 136 aa5.8□□□□□ -1.48
SMARCD3-215ENST00000496530 RASL10AQ92737 203 aa5.8□□□□□ -1.48
SMARCD3-215ENST00000496530 NACAE9PAV3 2078 aa5.79□□□□□ -1.48
SMARCD3-215ENST00000496530 PLAC8L1A1L4L8 177 aa5.79□□□□□ -1.48
SMARCD3-215ENST00000496530 A8MWV9 139 aa5.79□□□□□ -1.48
SMARCD3-215ENST00000496530 S100A8P05109 93 aa5.79□□□□□ -1.48
SMARCD3-215ENST00000496530 P0DMU3 169 aa5.79□□□□□ -1.48
SMARCD3-215ENST00000496530 FAM231AP0DMU4 169 aa5.79□□□□□ -1.48
SMARCD3-215ENST00000496530 FAM231CP0DMU5 169 aa5.79□□□□□ -1.48
SMARCD3-215ENST00000496530 EVI2AP22794 236 aa5.79□□□□□ -1.48
SMARCD3-215ENST00000496530 FABP9Q0Z7S8 132 aa5.79□□□□□ -1.48
SMARCD3-215ENST00000496530 C15orf53Q8NAA6 179 aa5.79□□□□□ -1.48
SMARCD3-215ENST00000496530 SAMD10Q9BYL1 202 aa5.79□□□□□ -1.48
SMARCD3-215ENST00000496530 KRTAP17-1Q9BYP8 105 aa5.79□□□□□ -1.48
SMARCD3-215ENST00000496530 SCRT2Q9NQ03 307 aa5.79□□□□□ -1.48
SMARCD3-215ENST00000496530 A0A1B0GW15 77 aa5.78□□□□□ -1.48
SMARCD3-215ENST00000496530 RS1O15537 224 aa5.78□□□□□ -1.48
SMARCD3-215ENST00000496530 RPS10P46783 165 aaKnown RBP5.78□□□□□ -1.48
SMARCD3-215ENST00000496530 HBBP68871 147 aa5.78□□□□□ -1.48
SMARCD3-215ENST00000496530 ELOBQ15370 118 aa5.78□□□□□ -1.48
SMARCD3-215ENST00000496530 ZNF56Q15929 161 aa5.78□□□□□ -1.48
SMARCD3-215ENST00000496530 CFAP126Q5VTH2 177 aa5.78□□□□□ -1.48
SMARCD3-215ENST00000496530 UBE2DNLQ8IWF7 75 aa5.78□□□□□ -1.48
SMARCD3-215ENST00000496530 FRZBQ92765 325 aa5.78□□□□□ -1.48
SMARCD3-215ENST00000496530 ZNF479Q96JC4 524 aa5.78□□□□□ -1.48
SMARCD3-215ENST00000496530 APLNQ9ULZ1 77 aa5.78□□□□□ -1.48
SMARCD3-215ENST00000496530 HHLA3Q9XRX5 114 aa5.78□□□□□ -1.48
SMARCD3-215ENST00000496530 TRAPPC1Q9Y5R8 145 aa5.78□□□□□ -1.48
SMARCD3-215ENST00000496530 TRAV4A0A0B4J268 109 aa5.77□□□□□ -1.49
SMARCD3-215ENST00000496530 A0A0J9YY99 117 aa5.77□□□□□ -1.49
SMARCD3-215ENST00000496530 APCSP02743 223 aa5.77□□□□□ -1.49
SMARCD3-215ENST00000496530 CRYGDP07320 174 aa5.77□□□□□ -1.49
SMARCD3-215ENST00000496530 CTRLP40313 264 aa5.77□□□□□ -1.49
SMARCD3-215ENST00000496530 KIAA1644Q3SXP7 199 aa5.77□□□□□ -1.49
SMARCD3-215ENST00000496530 PTH2Q96A98 100 aa5.77□□□□□ -1.49
SMARCD3-215ENST00000496530 AP1S3Q96PC3 154 aa5.77□□□□□ -1.49
SMARCD3-215ENST00000496530 DPH3P1Q9H4G8 78 aa5.77□□□□□ -1.49
SMARCD3-215ENST00000496530 MUC4Q99102 2169 aa5.76□□□□□ -1.49
SMARCD3-215ENST00000496530 TRAV9-1A0A075B6T8 112 aa5.76□□□□□ -1.49
SMARCD3-215ENST00000496530 RAB4AP20338 218 aa5.76□□□□□ -1.49
SMARCD3-215ENST00000496530 CKS2P33552 79 aa5.76□□□□□ -1.49
SMARCD3-215ENST00000496530 AMN1Q8IY45 258 aa5.76□□□□□ -1.49
SMARCD3-215ENST00000496530 POM121L12Q8N7R1 296 aa5.76□□□□□ -1.49
SMARCD3-215ENST00000496530 TMEM191AQ9H0A3 160 aa5.76□□□□□ -1.49
SMARCD3-215ENST00000496530 TENM3Q9P273 2699 aa5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 TRAV26-2A0A0B4J265 109 aa5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 COLCA2A8K830 154 aa5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 SMKR1H3BMG3 65 aa5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 PAX4O43316 350 aa5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 NUDT3O95989 172 aa5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 SLAQ13239 276 aa5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 FHL2Q14192 279 aa5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 COX19Q49B96 90 aa5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 FAM104BQ5XKR9 115 aa5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 TMEM136Q6ZRR5 245 aa5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 Q6ZSN1 163 aa5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 ATP5L2Q7Z4Y8 100 aa5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 PRADC1Q9BSG0 188 aa5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 MRPL18Q9H0U6 180 aaKnown RBP5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 TNFRSF18Q9Y5U5 241 aa5.75□□□□□ -1.49
SMARCD3-215ENST00000496530 TRBV24-1A0A075B6N3 115 aa5.74□□□□□ -1.49
SMARCD3-215ENST00000496530 LOC389332A0A1B0GUA5 103 aa5.74□□□□□ -1.49
SMARCD3-215ENST00000496530 GAGE12JA6NER3 117 aa5.74□□□□□ -1.49
SMARCD3-215ENST00000496530 RHODO00212 210 aa5.74□□□□□ -1.49
SMARCD3-215ENST00000496530 CIDEAO60543 219 aa5.74□□□□□ -1.49
SMARCD3-215ENST00000496530 GATA1P15976 413 aaPredicted RBP5.74□□□□□ -1.49
SMARCD3-215ENST00000496530 GAGE1Q13065 139 aa5.74□□□□□ -1.49
SMARCD3-215ENST00000496530 GAGE4Q13068 117 aa5.74□□□□□ -1.49
SMARCD3-215ENST00000496530 GAGE5Q13069 117 aa5.74□□□□□ -1.49
SMARCD3-215ENST00000496530 MRPL51Q4U2R6 128 aaKnown RBP5.74□□□□□ -1.49
SMARCD3-215ENST00000496530 GAGE13Q4V321 117 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms