RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	LYRM2	Q9NU23	88 aa	Predicted RBP	5.09	□□□□□ -1.59
NVL-223	ENST00000496393	TRAV8-1	A0A0A6YYK1	113 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	TRAV21	A0A0B4J279	112 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	APOC3	P02656	99 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	PVALB	P20472	110 aa	Predicted RBP	5.08	□□□□□ -1.6
NVL-223	ENST00000496393	HBG1	P69891	147 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	HBG2	P69892	147 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	IL15RA	Q13261	267 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	LRRC37A5P	Q49AS3	106 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	GOLT1A	Q6ZVE7	132 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	TMEM75	Q8N9X5	138 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	UBE2W	Q96B02	151 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	RMI2	Q96E14	147 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	TVP23C	Q96ET8	276 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	SGK494	Q96LW2	274 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	ATP5S	Q99766	215 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	NKX6-2	Q9C056	277 aa	Predicted RBP	5.08	□□□□□ -1.6
NVL-223	ENST00000496393		Q9UF83	564 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	KLK12	Q9UKR0	248 aa		5.08	□□□□□ -1.6
NVL-223	ENST00000496393	BORCS7-ASMT	A0A0B4J1R7	106 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	TMEM218	A2RU14	115 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	PGPEP1L	A6NFU8	196 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	SCO1	O75880	301 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	SNAPIN	O95295	136 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	RAB5C	P51148	216 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	GNG5	P63218	68 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	RAB32	Q13637	225 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	ODF1	Q14990	250 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	ZNF506	Q5JVG8	444 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	C10orf91	Q5T1B1	145 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	SEC11C	Q9BY50	192 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	TREM1	Q9NP99	234 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	CYTL1	Q9NRR1	136 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	C11orf21	Q9P2W6	132 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	CARHSP1	Q9Y2V2	147 aa	Known RBP	5.07	□□□□□ -1.6
NVL-223	ENST00000496393	LENEP	Q9Y5L5	61 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	COX11	Q9Y6N1	276 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	URGCP-MRPS24	S4R325	110 aa		5.07	□□□□□ -1.6
NVL-223	ENST00000496393	LINC00694	P0DN24	101 aa		5.06	□□□□□ -1.6
NVL-223	ENST00000496393	MGST1	P10620	155 aa	Known RBP	5.06	□□□□□ -1.6
NVL-223	ENST00000496393	RPL12	P30050	165 aa	Known RBP	5.06	□□□□□ -1.6
NVL-223	ENST00000496393	SULT1A2	P50226	295 aa		5.06	□□□□□ -1.6
NVL-223	ENST00000496393	FLI1	Q01543	452 aa	Predicted RBP	5.06	□□□□□ -1.6
NVL-223	ENST00000496393	NHLH2	Q02577	135 aa		5.06	□□□□□ -1.6
NVL-223	ENST00000496393	ATP6V1F	Q16864	119 aa		5.06	□□□□□ -1.6
NVL-223	ENST00000496393	C14orf178	Q8N769	122 aa	Predicted RBP	5.06	□□□□□ -1.6
NVL-223	ENST00000496393	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.06	□□□□□ -1.6
NVL-223	ENST00000496393	CLRN3	Q8NCR9	226 aa		5.06	□□□□□ -1.6
NVL-223	ENST00000496393	OR5C1	Q8NGR4	320 aa		5.06	□□□□□ -1.6
NVL-223	ENST00000496393	CMTM2	Q8TAZ6	248 aa		5.06	□□□□□ -1.6
NVL-223	ENST00000496393	KCNS1	Q96KK3	526 aa		5.06	□□□□□ -1.6
NVL-223	ENST00000496393	SAMD10	Q9BYL1	202 aa		5.06	□□□□□ -1.6
NVL-223	ENST00000496393	PGP	A6NDG6	321 aa		5.05	□□□□□ -1.6
NVL-223	ENST00000496393		F8W036	122 aa		5.05	□□□□□ -1.6
NVL-223	ENST00000496393		H0YIZ8	118 aa		5.05	□□□□□ -1.6
NVL-223	ENST00000496393	PANO1	I0J062	215 aa		5.05	□□□□□ -1.6
NVL-223	ENST00000496393	HLA-DQA1	P01909	254 aa		5.05	□□□□□ -1.6
NVL-223	ENST00000496393	SEC11B	P0C7V7	166 aa		5.05	□□□□□ -1.6
NVL-223	ENST00000496393	ZNF80	P51504	273 aa	Predicted RBP	5.05	□□□□□ -1.6
NVL-223	ENST00000496393	SMUG1	Q53HV7	270 aa		5.05	□□□□□ -1.6
NVL-223	ENST00000496393	FAM74A1	Q5RGS3	127 aa		5.05	□□□□□ -1.6
NVL-223	ENST00000496393	NIT1	Q86X76	327 aa		5.05	□□□□□ -1.6
NVL-223	ENST00000496393	CYB561D1	Q8N8Q1	229 aa		5.05	□□□□□ -1.6
NVL-223	ENST00000496393	TMED6	Q8WW62	240 aa		5.05	□□□□□ -1.6
NVL-223	ENST00000496393	C9orf85	Q96MD7	179 aa		5.05	□□□□□ -1.6
NVL-223	ENST00000496393	PARL	Q9H300	379 aa		5.05	□□□□□ -1.6
NVL-223	ENST00000496393	SMDT1	Q9H4I9	107 aa		5.05	□□□□□ -1.6
NVL-223	ENST00000496393	OTOR	Q9NRC9	128 aa		5.05	□□□□□ -1.6
NVL-223	ENST00000496393		A0A087WX48	190 aa		5.04	□□□□□ -1.6
NVL-223	ENST00000496393	GCG	P01275	180 aa		5.04	□□□□□ -1.6
NVL-223	ENST00000496393	RNASE3	P12724	160 aa	Known RBP	5.04	□□□□□ -1.6
NVL-223	ENST00000496393	PEA15	Q15121	130 aa		5.04	□□□□□ -1.6
NVL-223	ENST00000496393	KHDC3L	Q587J8	217 aa		5.04	□□□□□ -1.6
NVL-223	ENST00000496393	FFAR4	Q5NUL3	377 aa		5.04	□□□□□ -1.6
NVL-223	ENST00000496393	WDR61	Q9GZS3	305 aa	Known RBP	5.04	□□□□□ -1.6
NVL-223	ENST00000496393	JPT2	Q9H910	190 aa		5.04	□□□□□ -1.6
NVL-223	ENST00000496393	KCNIP2	Q9NS61	270 aa		5.04	□□□□□ -1.6
NVL-223	ENST00000496393	OR5AC2	Q9NZP5	309 aa		5.04	□□□□□ -1.6
NVL-223	ENST00000496393		A0A087WWC5	75 aa		5.03	□□□□□ -1.6
NVL-223	ENST00000496393	USP17L23	D6RBM5	183 aa		5.03	□□□□□ -1.6
NVL-223	ENST00000496393	HMGB3	O15347	200 aa	Known RBP	5.03	□□□□□ -1.6
NVL-223	ENST00000496393	CIDEA	O60543	219 aa		5.03	□□□□□ -1.6
NVL-223	ENST00000496393	C14orf177	Q52M58	125 aa		5.03	□□□□□ -1.6
NVL-223	ENST00000496393	LYPD6B	Q8NI32	183 aa		5.03	□□□□□ -1.6
NVL-223	ENST00000496393	NDFIP1	Q9BT67	221 aa		5.03	□□□□□ -1.6
NVL-223	ENST00000496393	C1orf43	Q9BWL3	253 aa		5.03	□□□□□ -1.6
NVL-223	ENST00000496393	SH3BGRL3	Q9H299	93 aa		5.03	□□□□□ -1.6
NVL-223	ENST00000496393	UMAD1	C9J7I0	102 aa		5.02	□□□□□ -1.61
NVL-223	ENST00000496393	C17orf112	F2Z3M2	114 aa		5.02	□□□□□ -1.61
NVL-223	ENST00000496393	CRP	P02741	224 aa		5.02	□□□□□ -1.61
NVL-223	ENST00000496393	TAS2R45	P59539	299 aa		5.02	□□□□□ -1.61
NVL-223	ENST00000496393	RAB2A	P61019	212 aa		5.02	□□□□□ -1.61
NVL-223	ENST00000496393	FAM74A4	Q5TZK3	123 aa		5.02	□□□□□ -1.61
NVL-223	ENST00000496393	RPL7L1	Q6DKI1	246 aa	Known RBP	5.02	□□□□□ -1.61
NVL-223	ENST00000496393	KCNIP4	Q6PIL6	250 aa		5.02	□□□□□ -1.61
NVL-223	ENST00000496393		Q6ZRU5	148 aa		5.02	□□□□□ -1.61
NVL-223	ENST00000496393	C15orf54	Q8N8G6	183 aa		5.02	□□□□□ -1.61
NVL-223	ENST00000496393	LINC00479	Q96M42	142 aa		5.02	□□□□□ -1.61
NVL-223	ENST00000496393	SMCO4	Q9NRQ5	59 aa		5.02	□□□□□ -1.61
NVL-223	ENST00000496393		A8MWV9	139 aa		5.01	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms