RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 CXCL5P42830 114 aa6.93□□□□□ -1.3
HPS4-217ENST00000496385 C2orf66Q6UXQ4 117 aa6.93□□□□□ -1.3
HPS4-217ENST00000496385 KLHL30-AS1Q8NEE0 82 aa6.93□□□□□ -1.3
HPS4-217ENST00000496385 TPSG1Q9NRR2 321 aa6.93□□□□□ -1.3
HPS4-217ENST00000496385 ZNRD1Q9P1U0 126 aa6.93□□□□□ -1.3
HPS4-217ENST00000496385 ABCA12Q86UK0 2595 aa6.93□□□□□ -1.3
HPS4-217ENST00000496385 ROS1P08922 2347 aa6.93□□□□□ -1.3
HPS4-217ENST00000496385 AKAP6Q13023 2319 aa6.93□□□□□ -1.3
HPS4-217ENST00000496385 IGHV3-21A0A0B4J1V1 117 aa6.93□□□□□ -1.3
HPS4-217ENST00000496385 A4D1N5 150 aa6.93□□□□□ -1.3
HPS4-217ENST00000496385 M0R381 172 aa6.93□□□□□ -1.3
HPS4-217ENST00000496385 CRYGAP11844 174 aa6.93□□□□□ -1.3
HPS4-217ENST00000496385 SUMO2P61956 95 aaKnown RBP6.93□□□□□ -1.3
HPS4-217ENST00000496385 FBN2P35556 2912 aa6.93□□□□□ -1.3
HPS4-217ENST00000496385 FAM236AA0A1B0GUQ0 79 aa6.92□□□□□ -1.3
HPS4-217ENST00000496385 FAM236BA0A1B0GV22 79 aa6.92□□□□□ -1.3
HPS4-217ENST00000496385 COX6CP09669 75 aa6.92□□□□□ -1.3
HPS4-217ENST00000496385 PMVKQ15126 192 aa6.92□□□□□ -1.3
HPS4-217ENST00000496385 CCL13Q99616 98 aa6.92□□□□□ -1.3
HPS4-217ENST00000496385 CTSZQ9UBR2 303 aa6.92□□□□□ -1.3
HPS4-217ENST00000496385 ASH1LQ9NR48 2969 aaKnown RBP6.92□□□□□ -1.3
HPS4-217ENST00000496385 CSMD1Q96PZ7 3565 aa6.92□□□□□ -1.3
HPS4-217ENST00000496385 TRGV11A0A075B6L2 103 aa6.92□□□□□ -1.3
HPS4-217ENST00000496385 IGHV1-18A0A0C4DH31 117 aa6.92□□□□□ -1.3
HPS4-217ENST00000496385 EMP1P54849 157 aa6.92□□□□□ -1.3
HPS4-217ENST00000496385 OXLD1Q5BKU9 147 aa6.92□□□□□ -1.3
HPS4-217ENST00000496385 LINC00643Q86TS7 51 aa6.92□□□□□ -1.3
HPS4-217ENST00000496385 ABCA4P78363 2273 aa6.92□□□□□ -1.3
HPS4-217ENST00000496385 POLQO75417 2590 aa6.92□□□□□ -1.3
HPS4-217ENST00000496385 MAP1AP78559 2803 aaPredicted RBP6.92□□□□□ -1.3
HPS4-217ENST00000496385 A0A0J9YX75 114 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 TRGV3P03979 118 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 COX7CP15954 63 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 DUX4L9Q6RFH8 374 aaPredicted RBP6.91□□□□□ -1.3
HPS4-217ENST00000496385 TMEM141Q96I45 108 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 RNF5Q99942 180 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 LOC107984640A0A0U1RRK4 108 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 K7EIM0 57 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 Q6ZS46 218 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 FAM216BQ8N7L0 139 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 MRAPQ8TCY5 172 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 METTL26Q96S19 204 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 CADP27708 2225 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 IGLV4-69A0A075B6H9 119 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 IGHV7-4-1A0A0J9YVY3 117 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 C17orf100A8MU93 164 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 OOSP1A8MZH6 123 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 H7C423 109 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 LGALS3P17931 250 aaKnown RBP6.91□□□□□ -1.3
HPS4-217ENST00000496385 AMELXQ99217 191 aa6.91□□□□□ -1.3
HPS4-217ENST00000496385 ITPR2Q14571 2701 aa6.9□□□□□ -1.3
HPS4-217ENST00000496385 IGLV3-9A0A075B6K5 115 aa6.9□□□□□ -1.3
HPS4-217ENST00000496385 IGKV3D-20A0A0C4DH25 116 aa6.9□□□□□ -1.3
HPS4-217ENST00000496385 J3QQQ9 107 aa6.9□□□□□ -1.3
HPS4-217ENST00000496385 CRYGDP07320 174 aa6.9□□□□□ -1.3
HPS4-217ENST00000496385 Q1RN00 199 aa6.9□□□□□ -1.3
HPS4-217ENST00000496385 SPANXN1Q5VSR9 72 aa6.9□□□□□ -1.3
HPS4-217ENST00000496385 GAGE2AQ6NT46 116 aa6.9□□□□□ -1.3
HPS4-217ENST00000496385 Q8TAT8 98 aa6.9□□□□□ -1.3
HPS4-217ENST00000496385 IGFBPL1Q8WX77 278 aa6.9□□□□□ -1.3
HPS4-217ENST00000496385 RNASE6Q93091 150 aaKnown RBP6.9□□□□□ -1.3
HPS4-217ENST00000496385 SDHAF1A6NFY7 115 aa6.9□□□□□ -1.31
HPS4-217ENST00000496385 ENSAO43768 121 aaKnown RBP6.9□□□□□ -1.31
HPS4-217ENST00000496385 C3orf36Q3SXR2 165 aa6.9□□□□□ -1.31
HPS4-217ENST00000496385 CFHR4Q92496 578 aa6.9□□□□□ -1.31
HPS4-217ENST00000496385 SPG11Q96JI7 2443 aa6.89□□□□□ -1.31
HPS4-217ENST00000496385 UNC79Q9P2D8 2635 aa6.89□□□□□ -1.31
HPS4-217ENST00000496385 RAI1Q7Z5J4 1906 aaPredicted RBP6.89□□□□□ -1.31
HPS4-217ENST00000496385 SPRY3O43610 288 aa6.89□□□□□ -1.31
HPS4-217ENST00000496385 SDIM1Q6ZPB5 146 aa6.89□□□□□ -1.31
HPS4-217ENST00000496385 TIMM17AQ99595 171 aa6.89□□□□□ -1.31
HPS4-217ENST00000496385 ZNF256Q9Y2P7 627 aaPredicted RBP6.89□□□□□ -1.31
HPS4-217ENST00000496385 TRAV26-2A0A0B4J265 109 aa6.89□□□□□ -1.31
HPS4-217ENST00000496385 LEPROTO15243 131 aa6.89□□□□□ -1.31
HPS4-217ENST00000496385 IGHV4-39P01824 125 aa6.89□□□□□ -1.31
HPS4-217ENST00000496385 TMEM200BQ69YZ2 307 aa6.89□□□□□ -1.31
HPS4-217ENST00000496385 KLK15Q9H2R5 256 aa6.89□□□□□ -1.31
HPS4-217ENST00000496385 APCP25054 2843 aa6.88□□□□□ -1.31
HPS4-217ENST00000496385 NOTCH2Q04721 2471 aa6.88□□□□□ -1.31
HPS4-217ENST00000496385 EIF4EBP3O60516 100 aaPredicted RBP6.88□□□□□ -1.31
HPS4-217ENST00000496385 TMEM258P61165 79 aa6.88□□□□□ -1.31
HPS4-217ENST00000496385 C5orf38Q86SI9 138 aa6.88□□□□□ -1.31
HPS4-217ENST00000496385 C3orf56Q8N813 242 aa6.88□□□□□ -1.31
HPS4-217ENST00000496385 DEFB108BQ8NET1 73 aa6.88□□□□□ -1.31
HPS4-217ENST00000496385 TMEM223A0PJW6 202 aa6.88□□□□□ -1.31
HPS4-217ENST00000496385 TRIAP1O43715 76 aa6.88□□□□□ -1.31
HPS4-217ENST00000496385 MFAP4P55083 255 aa6.88□□□□□ -1.31
HPS4-217ENST00000496385 DLX1P56177 255 aa6.88□□□□□ -1.31
HPS4-217ENST00000496385 MSMPQ1L6U9 139 aa6.88□□□□□ -1.31
HPS4-217ENST00000496385 MUSTN1Q8IVN3 82 aa6.88□□□□□ -1.31
HPS4-217ENST00000496385 DPH3P1Q9H4G8 78 aa6.88□□□□□ -1.31
HPS4-217ENST00000496385 IGIPA6NJ69 53 aa6.87□□□□□ -1.31
HPS4-217ENST00000496385 ATOX1O00244 68 aa6.87□□□□□ -1.31
HPS4-217ENST00000496385 LST1O00453 97 aa6.87□□□□□ -1.31
HPS4-217ENST00000496385 CCL3L1P16619 93 aa6.87□□□□□ -1.31
HPS4-217ENST00000496385 FBXL19-AS1Q494R0 122 aa6.87□□□□□ -1.31
HPS4-217ENST00000496385 MRPL53Q96EL3 112 aaKnown RBP6.87□□□□□ -1.31
HPS4-217ENST00000496385 ICOSQ9Y6W8 199 aa6.87□□□□□ -1.31
HPS4-217ENST00000496385 TRACP01848 142 aa6.86□□□□□ -1.31
HPS4-217ENST00000496385 ELANEP08246 267 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms