RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 BTF3L4Q96K17 158 aa13.76□□□□□ -0.21
ATG3-208ENST00000495756 A0A087WWL8 130 aa13.75□□□□□ -0.21
ATG3-208ENST00000495756 CRYGDP07320 174 aa13.75□□□□□ -0.21
ATG3-208ENST00000495756 EVI2AP22794 236 aa13.75□□□□□ -0.21
ATG3-208ENST00000495756 MRPL54Q6P161 138 aaKnown RBP13.75□□□□□ -0.21
ATG3-208ENST00000495756 TRAV9-1A0A075B6T8 112 aa13.74□□□□□ -0.21
ATG3-208ENST00000495756 HTN3P15516 51 aa13.74□□□□□ -0.21
ATG3-208ENST00000495756 FAM74A4Q5TZK3 123 aa13.74□□□□□ -0.21
ATG3-208ENST00000495756 UFSP1Q6NVU6 142 aa13.74□□□□□ -0.21
ATG3-208ENST00000495756 ZFP2Q6ZN57 461 aa13.74□□□□□ -0.21
ATG3-208ENST00000495756 ATP5L2Q7Z4Y8 100 aa13.74□□□□□ -0.21
ATG3-208ENST00000495756 KIF25-AS1Q9Y6Z4 181 aa13.74□□□□□ -0.21
ATG3-208ENST00000495756 IGHV3-73A0A0B4J1V6 119 aa13.74□□□□□ -0.21
ATG3-208ENST00000495756 A0A1B0GW15 77 aa13.74□□□□□ -0.21
ATG3-208ENST00000495756 A0A1B0GXF2 115 aa13.74□□□□□ -0.21
ATG3-208ENST00000495756 CIDEAO60543 219 aa13.74□□□□□ -0.21
ATG3-208ENST00000495756 SMIM17P0DL12 118 aa13.74□□□□□ -0.21
ATG3-208ENST00000495756 HOXA5P20719 270 aa13.74□□□□□ -0.21
ATG3-208ENST00000495756 RHODO00212 210 aa13.73□□□□□ -0.21
ATG3-208ENST00000495756 CAMPP49913 170 aa13.73□□□□□ -0.21
ATG3-208ENST00000495756 HBBP68871 147 aa13.73□□□□□ -0.21
ATG3-208ENST00000495756 FHL2Q14192 279 aa13.73□□□□□ -0.21
ATG3-208ENST00000495756 SMIM15Q7Z3B0 74 aa13.73□□□□□ -0.21
ATG3-208ENST00000495756 DEFB131BA0A096LNP1 70 aa13.72□□□□□ -0.21
ATG3-208ENST00000495756 TRAV10A0A0B4J240 114 aa13.72□□□□□ -0.21
ATG3-208ENST00000495756 F5H768 121 aa13.72□□□□□ -0.21
ATG3-208ENST00000495756 TMEM88Q6PEY1 159 aa13.72□□□□□ -0.21
ATG3-208ENST00000495756 CBLN2Q8IUK8 224 aa13.72□□□□□ -0.21
ATG3-208ENST00000495756 DPH3P1Q9H4G8 78 aa13.72□□□□□ -0.21
ATG3-208ENST00000495756 SMCO4Q9NRQ5 59 aa13.72□□□□□ -0.21
ATG3-208ENST00000495756 CSMD3Q7Z407 3707 aa13.71□□□□□ -0.21
ATG3-208ENST00000495756 TRGV4A0A0C4DH28 118 aa13.71□□□□□ -0.21
ATG3-208ENST00000495756 S100A8P05109 93 aa13.71□□□□□ -0.21
ATG3-208ENST00000495756 LINC00315P59091 139 aa13.71□□□□□ -0.21
ATG3-208ENST00000495756 PHLDA1Q8WV24 401 aaPredicted RBP13.71□□□□□ -0.21
ATG3-208ENST00000495756 WWC2-AS2Q96NR7 200 aa13.71□□□□□ -0.21
ATG3-208ENST00000495756 TMEM191AQ9H0A3 160 aa13.71□□□□□ -0.21
ATG3-208ENST00000495756 ELOBQ15370 118 aa13.7□□□□□ -0.22
ATG3-208ENST00000495756 Q6ZSN1 163 aa13.69□□□□□ -0.22
ATG3-208ENST00000495756 HHLA3Q9XRX5 114 aa13.69□□□□□ -0.22
ATG3-208ENST00000495756 MGPP08493 103 aa13.68□□□□□ -0.22
ATG3-208ENST00000495756 GATA1P15976 413 aaPredicted RBP13.68□□□□□ -0.22
ATG3-208ENST00000495756 ZNF56Q15929 161 aa13.68□□□□□ -0.22
ATG3-208ENST00000495756 RASL11AQ6T310 242 aa13.68□□□□□ -0.22
ATG3-208ENST00000495756 GATD1Q8NB37 220 aa13.68□□□□□ -0.22
ATG3-208ENST00000495756 YPEL4Q96NS1 127 aa13.68□□□□□ -0.22
ATG3-208ENST00000495756 DYNC2H1Q8NCM8 4307 aaKnown RBP13.68□□□□□ -0.22
ATG3-208ENST00000495756 TGIF2-C20orf24A0A0A6YYL0 155 aa13.67□□□□□ -0.22
ATG3-208ENST00000495756 F5H697 171 aa13.67□□□□□ -0.22
ATG3-208ENST00000495756 RAB4BP61018 213 aa13.67□□□□□ -0.22
ATG3-208ENST00000495756 SLAQ13239 276 aa13.67□□□□□ -0.22
ATG3-208ENST00000495756 PRO0255Q9UI72 69 aa13.67□□□□□ -0.22
ATG3-208ENST00000495756 TRBV24-1A0A075B6N3 115 aa13.67□□□□□ -0.22
ATG3-208ENST00000495756 SCO1O75880 301 aa13.67□□□□□ -0.22
ATG3-208ENST00000495756 CRYBA4P53673 196 aa13.67□□□□□ -0.22
ATG3-208ENST00000495756 TRAV26-1A0A087WT03 109 aa13.66□□□□□ -0.22
ATG3-208ENST00000495756 AMN1Q8IY45 258 aa13.66□□□□□ -0.22
ATG3-208ENST00000495756 SLC25A29Q8N8R3 303 aa13.66□□□□□ -0.22
ATG3-208ENST00000495756 MUC7Q8TAX7 377 aa13.66□□□□□ -0.22
ATG3-208ENST00000495756 TRBV6-4A0A1B0GX49 114 aa13.65□□□□□ -0.22
ATG3-208ENST00000495756 FAM104BQ5XKR9 115 aa13.65□□□□□ -0.22
ATG3-208ENST00000495756 RNF185Q96GF1 192 aa13.65□□□□□ -0.22
ATG3-208ENST00000495756 VSIG2Q96IQ7 327 aa13.65□□□□□ -0.22
ATG3-208ENST00000495756 STARD9Q9P2P6 4700 aa13.64□□□□□ -0.23
ATG3-208ENST00000495756 A0A0J9YY99 117 aa13.64□□□□□ -0.23
ATG3-208ENST00000495756 RAB4AP20338 218 aa13.64□□□□□ -0.23
ATG3-208ENST00000495756 SUMO4Q6EEV6 95 aa13.64□□□□□ -0.23
ATG3-208ENST00000495756 CEMP1Q6PRD7 247 aaPredicted RBP13.64□□□□□ -0.23
ATG3-208ENST00000495756 NUPR2A6NF83 97 aa13.63□□□□□ -0.23
ATG3-208ENST00000495756 K7EQD1 137 aa13.63□□□□□ -0.23
ATG3-208ENST00000495756 PAX4O43316 350 aa13.63□□□□□ -0.23
ATG3-208ENST00000495756 RHOHQ15669 191 aa13.63□□□□□ -0.23
ATG3-208ENST00000495756 TMEM136Q6ZRR5 245 aa13.63□□□□□ -0.23
ATG3-208ENST00000495756 FAM210BQ96KR6 192 aa13.63□□□□□ -0.23
ATG3-208ENST00000495756 M0QY20 66 aa13.62□□□□□ -0.23
ATG3-208ENST00000495756 TENM2Q9NT68 2774 aa13.61□□□□□ -0.23
ATG3-208ENST00000495756 TRAV26-2A0A0B4J265 109 aa13.61□□□□□ -0.23
ATG3-208ENST00000495756 H3BNG1 76 aa13.61□□□□□ -0.23
ATG3-208ENST00000495756 COX19Q49B96 90 aa13.61□□□□□ -0.23
ATG3-208ENST00000495756 MRPL51Q4U2R6 128 aaKnown RBP13.61□□□□□ -0.23
ATG3-208ENST00000495756 PRADC1Q9BSG0 188 aa13.61□□□□□ -0.23
ATG3-208ENST00000495756 GNB1LQ9BYB4 327 aa13.61□□□□□ -0.23
ATG3-208ENST00000495756 IGLL5B9A064 214 aa13.61□□□□□ -0.23
ATG3-208ENST00000495756 H7C1H1 209 aa13.61□□□□□ -0.23
ATG3-208ENST00000495756 P0DMU3 169 aa13.61□□□□□ -0.23
ATG3-208ENST00000495756 FAM231AP0DMU4 169 aa13.61□□□□□ -0.23
ATG3-208ENST00000495756 FAM231CP0DMU5 169 aa13.61□□□□□ -0.23
ATG3-208ENST00000495756 ZFAND6Q6FIF0 208 aa13.61□□□□□ -0.23
ATG3-208ENST00000495756 FRZBQ92765 325 aa13.61□□□□□ -0.23
ATG3-208ENST00000495756 Q9UF83 564 aa13.61□□□□□ -0.23
ATG3-208ENST00000495756 TRBV10-1A0A0K0K1A3 114 aa13.6□□□□□ -0.23
ATG3-208ENST00000495756 LOC100131303A0A0U1RQF7 123 aa13.6□□□□□ -0.23
ATG3-208ENST00000495756 GYPEP15421 78 aa13.6□□□□□ -0.23
ATG3-208ENST00000495756 MRAP2Q96G30 205 aa13.6□□□□□ -0.23
ATG3-208ENST00000495756 KLK5Q9Y337 293 aaPredicted RBP13.6□□□□□ -0.23
ATG3-208ENST00000495756 HLA-DQA1P01909 254 aa13.59□□□□□ -0.23
ATG3-208ENST00000495756 COLCA2A8K830 154 aa13.58□□□□□ -0.24
ATG3-208ENST00000495756 GAS8-AS1O95177 125 aa13.58□□□□□ -0.24
ATG3-208ENST00000495756 MT-ND6P03923 174 aa13.58□□□□□ -0.24
ATG3-208ENST00000495756 PLECQ15149 4684 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms