RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 C11orf86A6NJI1 115 aa9.73□□□□□ -0.85
PTPN7-217ENST00000495688 MED14OSP0DP75 135 aa9.73□□□□□ -0.85
PTPN7-217ENST00000495688 SCGB2A2Q13296 93 aa9.73□□□□□ -0.85
PTPN7-217ENST00000495688 FAM74A4Q5TZK3 123 aa9.73□□□□□ -0.85
PTPN7-217ENST00000495688 SFTA2Q6UW10 78 aa9.73□□□□□ -0.85
PTPN7-217ENST00000495688 DCANP1Q8TF63 244 aa9.73□□□□□ -0.85
PTPN7-217ENST00000495688 ANKRD17O75179 2603 aaKnown RBP9.73□□□□□ -0.85
PTPN7-217ENST00000495688 ACACBO00763 2458 aa9.72□□□□□ -0.85
PTPN7-217ENST00000495688 ZNF688P0C7X2 276 aa9.72□□□□□ -0.85
PTPN7-217ENST00000495688 RRN3P1Q2M238 152 aa9.72□□□□□ -0.85
PTPN7-217ENST00000495688 MYO9AB2RTY4 2548 aa9.72□□□□□ -0.85
PTPN7-217ENST00000495688 IGLV4-69A0A075B6H9 119 aa9.72□□□□□ -0.85
PTPN7-217ENST00000495688 H3BUA1 57 aa9.72□□□□□ -0.85
PTPN7-217ENST00000495688 ATP5J2P56134 94 aa9.72□□□□□ -0.85
PTPN7-217ENST00000495688 SCGB1D4Q6XE38 83 aa9.72□□□□□ -0.85
PTPN7-217ENST00000495688 ZFP2Q6ZN57 461 aa9.72□□□□□ -0.85
PTPN7-217ENST00000495688 ZFYVE26Q68DK2 2539 aa9.72□□□□□ -0.85
PTPN7-217ENST00000495688 NXPH4O95158 308 aa9.71□□□□□ -0.85
PTPN7-217ENST00000495688 COX6B1P14854 86 aa9.71□□□□□ -0.85
PTPN7-217ENST00000495688 ETDBQ3ZM63 59 aa9.71□□□□□ -0.85
PTPN7-217ENST00000495688 MORN3Q6PF18 240 aaPredicted RBP9.71□□□□□ -0.85
PTPN7-217ENST00000495688 POLR2KP53803 58 aaKnown RBP9.71□□□□□ -0.86
PTPN7-217ENST00000495688 MDFICQ9P1T7 246 aa9.71□□□□□ -0.86
PTPN7-217ENST00000495688 IGHV4OR15-8A0A075B7B6 117 aa9.7□□□□□ -0.86
PTPN7-217ENST00000495688 A0A087WW49 117 aa9.7□□□□□ -0.86
PTPN7-217ENST00000495688 IGIPA6NJ69 53 aa9.7□□□□□ -0.86
PTPN7-217ENST00000495688 BRI3O95415 125 aa9.7□□□□□ -0.86
PTPN7-217ENST00000495688 MSMBP08118 114 aa9.7□□□□□ -0.86
PTPN7-217ENST00000495688 CFHR3Q02985 330 aa9.7□□□□□ -0.86
PTPN7-217ENST00000495688 POM121L12Q8N7R1 296 aa9.7□□□□□ -0.86
PTPN7-217ENST00000495688 NRGNQ92686 78 aa9.7□□□□□ -0.86
PTPN7-217ENST00000495688 SPANXB1Q9NS25 103 aaPredicted RBP9.7□□□□□ -0.86
PTPN7-217ENST00000495688 FAM208BQ5VWN6 2430 aa9.7□□□□□ -0.86
PTPN7-217ENST00000495688 A0A1B0GWB2 263 aa9.7□□□□□ -0.86
PTPN7-217ENST00000495688 SDHAF1A6NFY7 115 aa9.7□□□□□ -0.86
PTPN7-217ENST00000495688 PGPEP1Q9NXJ5 209 aa9.7□□□□□ -0.86
PTPN7-217ENST00000495688 ZNF256Q9Y2P7 627 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-217ENST00000495688 LRRK2Q5S007 2527 aa9.69□□□□□ -0.86
PTPN7-217ENST00000495688 TEX15Q9BXT5 2789 aa9.69□□□□□ -0.86
PTPN7-217ENST00000495688 TRBV7-9A0A0J9YWB2 115 aa9.69□□□□□ -0.86
PTPN7-217ENST00000495688 HOXA3O43365 443 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-217ENST00000495688 CIDEAO60543 219 aa9.69□□□□□ -0.86
PTPN7-217ENST00000495688 PPP1R17O96001 155 aa9.69□□□□□ -0.86
PTPN7-217ENST00000495688 SRSF9Q13242 221 aaKnown RBP eCLIP9.69□□□□□ -0.86
PTPN7-217ENST00000495688 OPRPNQ99935 248 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-217ENST00000495688 F8W1H4 67 aa9.69□□□□□ -0.86
PTPN7-217ENST00000495688 IGHV4-59P01825 116 aa9.69□□□□□ -0.86
PTPN7-217ENST00000495688 INSL3P51460 131 aa9.69□□□□□ -0.86
PTPN7-217ENST00000495688 TSPEAR-AS2P59090 65 aa9.69□□□□□ -0.86
PTPN7-217ENST00000495688 PRORYQ9H606 182 aa9.69□□□□□ -0.86
PTPN7-217ENST00000495688 LINC01549A6NIU2 74 aa9.68□□□□□ -0.86
PTPN7-217ENST00000495688 LINC01619G3V211 115 aa9.68□□□□□ -0.86
PTPN7-217ENST00000495688 ZNRF2Q8NHG8 242 aa9.68□□□□□ -0.86
PTPN7-217ENST00000495688 ABCA12Q86UK0 2595 aa9.68□□□□□ -0.86
PTPN7-217ENST00000495688 PSMB8P28062 276 aa9.68□□□□□ -0.86
PTPN7-217ENST00000495688 ID1P41134 155 aa9.68□□□□□ -0.86
PTPN7-217ENST00000495688 DUX5Q96PT3 197 aa9.68□□□□□ -0.86
PTPN7-217ENST00000495688 KIR2DL4Q99706 377 aa9.68□□□□□ -0.86
PTPN7-217ENST00000495688 MRPL16Q9NX20 251 aaKnown RBP9.68□□□□□ -0.86
PTPN7-217ENST00000495688 PRO0461Q9UI25 63 aa9.68□□□□□ -0.86
PTPN7-217ENST00000495688 TMEM238C9JI98 176 aa9.67□□□□□ -0.86
PTPN7-217ENST00000495688 VCYO14598 125 aa9.67□□□□□ -0.86
PTPN7-217ENST00000495688 PMVKQ15126 192 aa9.67□□□□□ -0.86
PTPN7-217ENST00000495688 SPINK13Q1W4C9 94 aa9.67□□□□□ -0.86
PTPN7-217ENST00000495688 GAGE13Q4V321 117 aa9.67□□□□□ -0.86
PTPN7-217ENST00000495688 TMEM170BQ5T4T1 132 aa9.67□□□□□ -0.86
PTPN7-217ENST00000495688 Q8N1Y9 231 aa9.67□□□□□ -0.86
PTPN7-217ENST00000495688 IGHV3-16A0A0C4DH30 117 aa9.67□□□□□ -0.86
PTPN7-217ENST00000495688 APOMO95445 188 aa9.67□□□□□ -0.86
PTPN7-217ENST00000495688 GTSF1LQ9H1H1 148 aa9.67□□□□□ -0.86
PTPN7-217ENST00000495688 TSSC4Q9Y5U2 329 aaPredicted RBP9.67□□□□□ -0.86
PTPN7-217ENST00000495688 TLN2Q9Y4G6 2542 aa9.66□□□□□ -0.86
PTPN7-217ENST00000495688 K7EMT4 169 aa9.66□□□□□ -0.86
PTPN7-217ENST00000495688 ZNF56Q15929 161 aa9.66□□□□□ -0.86
PTPN7-217ENST00000495688 SPAG8Q99932 426 aaPredicted RBP9.66□□□□□ -0.86
PTPN7-217ENST00000495688 PTPN13Q12923 2485 aa9.66□□□□□ -0.86
PTPN7-217ENST00000495688 A0A0J9YY99 117 aa9.66□□□□□ -0.86
PTPN7-217ENST00000495688 DEFB112Q30KQ8 113 aa9.66□□□□□ -0.86
PTPN7-217ENST00000495688 TRBV27A0A0K0K1C4 114 aa9.65□□□□□ -0.86
PTPN7-217ENST00000495688 MAPK1IP1LQ8NDC0 245 aa9.65□□□□□ -0.86
PTPN7-217ENST00000495688 NF1P21359 2839 aa9.65□□□□□ -0.86
PTPN7-217ENST00000495688 NIPBLQ6KC79 2804 aaeCLIP9.65□□□□□ -0.86
PTPN7-217ENST00000495688 LOC107984156A0A0G2JMH3 177 aa9.65□□□□□ -0.87
PTPN7-217ENST00000495688 A0A0J9YX75 114 aa9.65□□□□□ -0.87
PTPN7-217ENST00000495688 LGALS9O00182 355 aa9.65□□□□□ -0.87
PTPN7-217ENST00000495688 NDUFS8O00217 210 aa9.65□□□□□ -0.87
PTPN7-217ENST00000495688 UBE2D1P51668 147 aa9.65□□□□□ -0.87
PTPN7-217ENST00000495688 SYNJ2BPP57105 145 aa9.65□□□□□ -0.87
PTPN7-217ENST00000495688 ARL17AQ8IVW1 177 aa9.65□□□□□ -0.87
PTPN7-217ENST00000495688 C9orf85Q96MD7 179 aa9.65□□□□□ -0.87
PTPN7-217ENST00000495688 ZNF469Q96JG9 3925 aaPredicted RBP9.64□□□□□ -0.87
PTPN7-217ENST00000495688 M0QY20 66 aa9.64□□□□□ -0.87
PTPN7-217ENST00000495688 TSPAN13O95857 204 aa9.64□□□□□ -0.87
PTPN7-217ENST00000495688 RPL32P62910 135 aaKnown RBP9.64□□□□□ -0.87
PTPN7-217ENST00000495688 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
PTPN7-217ENST00000495688 CHD6Q8TD26 2715 aa9.64□□□□□ -0.87
PTPN7-217ENST00000495688 AZU1P20160 251 aa9.63□□□□□ -0.87
PTPN7-217ENST00000495688 ZNF876PQ49A33 203 aa9.63□□□□□ -0.87
PTPN7-217ENST00000495688 TIMM17AQ99595 171 aa9.63□□□□□ -0.87
PTPN7-217ENST00000495688 AKAP9Q99996 3911 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms