RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 FAM222AQ5U5X8 452 aa10.45□□□□□ -0.74
PTPRE-211ENST00000495530 MRPL16Q9NX20 251 aaKnown RBP10.45□□□□□ -0.74
PTPRE-211ENST00000495530 TRBV24-1A0A075B6N3 115 aa10.44□□□□□ -0.74
PTPRE-211ENST00000495530 TRGV2A0A075B6R0 118 aa10.44□□□□□ -0.74
PTPRE-211ENST00000495530 SMIM17P0DL12 118 aa10.44□□□□□ -0.74
PTPRE-211ENST00000495530 HBBP68871 147 aa10.44□□□□□ -0.74
PTPRE-211ENST00000495530 MRPL54Q6P161 138 aaKnown RBP10.44□□□□□ -0.74
PTPRE-211ENST00000495530 Q6ZTI0 123 aa10.44□□□□□ -0.74
PTPRE-211ENST00000495530 CBLN2Q8IUK8 224 aa10.44□□□□□ -0.74
PTPRE-211ENST00000495530 AP1S3Q96PC3 154 aa10.44□□□□□ -0.74
PTPRE-211ENST00000495530 A0A0J9YWU9 116 aa10.43□□□□□ -0.74
PTPRE-211ENST00000495530 GAGE12BA1L429 117 aa10.43□□□□□ -0.74
PTPRE-211ENST00000495530 GAGE7O76087 117 aa10.43□□□□□ -0.74
PTPRE-211ENST00000495530 GAGE12FP0CL80 117 aa10.43□□□□□ -0.74
PTPRE-211ENST00000495530 GAGE12GP0CL81 117 aa10.43□□□□□ -0.74
PTPRE-211ENST00000495530 GAGE12IP0CL82 117 aa10.43□□□□□ -0.74
PTPRE-211ENST00000495530 DEFB130BP0DP73 79 aa10.43□□□□□ -0.74
PTPRE-211ENST00000495530 DEFB130AP0DP74 79 aa10.43□□□□□ -0.74
PTPRE-211ENST00000495530 CAMPP49913 170 aa10.43□□□□□ -0.74
PTPRE-211ENST00000495530 DAD1P61803 113 aa10.43□□□□□ -0.74
PTPRE-211ENST00000495530 LINC00612Q8N6U2 182 aa10.43□□□□□ -0.74
PTPRE-211ENST00000495530 C18orf15Q96N68 181 aa10.43□□□□□ -0.74
PTPRE-211ENST00000495530 MSRB1Q9NZV6 116 aa10.43□□□□□ -0.74
PTPRE-211ENST00000495530 MUC4Q99102 2169 aa10.42□□□□□ -0.74
PTPRE-211ENST00000495530 OR4C5Q8NGB2 326 aa10.42□□□□□ -0.74
PTPRE-211ENST00000495530 FAM210BQ96KR6 192 aa10.42□□□□□ -0.74
PTPRE-211ENST00000495530 TMEM191AQ9H0A3 160 aa10.42□□□□□ -0.74
PTPRE-211ENST00000495530 FRAS1Q86XX4 4008 aa10.41□□□□□ -0.74
PTPRE-211ENST00000495530 TRAV4A0A0B4J268 109 aa10.41□□□□□ -0.74
PTPRE-211ENST00000495530 A0A1B0GXF2 115 aa10.41□□□□□ -0.74
PTPRE-211ENST00000495530 RHODO00212 210 aa10.41□□□□□ -0.74
PTPRE-211ENST00000495530 RS1O15537 224 aa10.41□□□□□ -0.74
PTPRE-211ENST00000495530 SCO1O75880 301 aa10.41□□□□□ -0.74
PTPRE-211ENST00000495530 RAB4BP61018 213 aa10.41□□□□□ -0.74
PTPRE-211ENST00000495530 ZFP2Q6ZN57 461 aa10.41□□□□□ -0.74
PTPRE-211ENST00000495530 C11orf45Q8TAV5 145 aa10.41□□□□□ -0.74
PTPRE-211ENST00000495530 DPH3P1Q9H4G8 78 aa10.41□□□□□ -0.74
PTPRE-211ENST00000495530 HUWE1Q7Z6Z7 4374 aaKnown RBP10.41□□□□□ -0.74
PTPRE-211ENST00000495530 STARD9Q9P2P6 4700 aa10.41□□□□□ -0.74
PTPRE-211ENST00000495530 TGIF2-C20orf24A0A0A6YYL0 155 aa10.4□□□□□ -0.74
PTPRE-211ENST00000495530 EVI2AP22794 236 aa10.4□□□□□ -0.74
PTPRE-211ENST00000495530 CFAP126Q5VTH2 177 aa10.4□□□□□ -0.74
PTPRE-211ENST00000495530 C14orf178Q8N769 122 aaPredicted RBP10.4□□□□□ -0.74
PTPRE-211ENST00000495530 YPEL4Q96NS1 127 aa10.4□□□□□ -0.74
PTPRE-211ENST00000495530 GNB1LQ9BYB4 327 aa10.4□□□□□ -0.74
PTPRE-211ENST00000495530 MT-ND6P03923 174 aa10.39□□□□□ -0.75
PTPRE-211ENST00000495530 CRYGDP07320 174 aa10.39□□□□□ -0.75
PTPRE-211ENST00000495530 GATD1Q8NB37 220 aa10.39□□□□□ -0.75
PTPRE-211ENST00000495530 FRZBQ92765 325 aa10.39□□□□□ -0.75
PTPRE-211ENST00000495530 JPT2Q9H910 190 aa10.39□□□□□ -0.75
PTPRE-211ENST00000495530 CELA1Q9UNI1 258 aa10.39□□□□□ -0.75
PTPRE-211ENST00000495530 A0A087WWL8 130 aa10.38□□□□□ -0.75
PTPRE-211ENST00000495530 HLA-DQA1P01909 254 aa10.38□□□□□ -0.75
PTPRE-211ENST00000495530 ATP5G1P05496 136 aa10.38□□□□□ -0.75
PTPRE-211ENST00000495530 FAM74A4Q5TZK3 123 aa10.38□□□□□ -0.75
PTPRE-211ENST00000495530 COLCA2A8K830 154 aa10.37□□□□□ -0.75
PTPRE-211ENST00000495530 F5H697 171 aa10.37□□□□□ -0.75
PTPRE-211ENST00000495530 SLAQ13239 276 aa10.37□□□□□ -0.75
PTPRE-211ENST00000495530 C12orf74Q32Q52 190 aa10.37□□□□□ -0.75
PTPRE-211ENST00000495530 FAM104BQ5XKR9 115 aa10.37□□□□□ -0.75
PTPRE-211ENST00000495530 POM121L12Q8N7R1 296 aa10.37□□□□□ -0.75
PTPRE-211ENST00000495530 SAMD10Q9BYL1 202 aa10.37□□□□□ -0.75
PTPRE-211ENST00000495530 KIF25-AS1Q9Y6Z4 181 aa10.37□□□□□ -0.75
PTPRE-211ENST00000495530 TRGV4A0A0C4DH28 118 aa10.36□□□□□ -0.75
PTPRE-211ENST00000495530 TMEM136Q6ZRR5 245 aa10.36□□□□□ -0.75
PTPRE-211ENST00000495530 ZNF479Q96JC4 524 aa10.36□□□□□ -0.75
PTPRE-211ENST00000495530 H7C1H1 209 aa10.35□□□□□ -0.75
PTPRE-211ENST00000495530 IGHV3-53P01767 116 aa10.35□□□□□ -0.75
PTPRE-211ENST00000495530 MGPP08493 103 aa10.35□□□□□ -0.75
PTPRE-211ENST00000495530 RAB4AP20338 218 aa10.35□□□□□ -0.75
PTPRE-211ENST00000495530 RAB5AP20339 215 aa10.35□□□□□ -0.75
PTPRE-211ENST00000495530 ZNF56Q15929 161 aa10.35□□□□□ -0.75
PTPRE-211ENST00000495530 UFSP1Q6NVU6 142 aa10.35□□□□□ -0.75
PTPRE-211ENST00000495530 TRAPPC1Q9Y5R8 145 aa10.35□□□□□ -0.75
PTPRE-211ENST00000495530 IGHV3-73A0A0B4J1V6 119 aa10.34□□□□□ -0.75
PTPRE-211ENST00000495530 APCSP02743 223 aa10.34□□□□□ -0.75
PTPRE-211ENST00000495530 PPBPP02775 128 aa10.34□□□□□ -0.75
PTPRE-211ENST00000495530 RPS10P46783 165 aaKnown RBP10.34□□□□□ -0.75
PTPRE-211ENST00000495530 LINC00315P59091 139 aa10.34□□□□□ -0.75
PTPRE-211ENST00000495530 AMN1Q8IY45 258 aa10.34□□□□□ -0.75
PTPRE-211ENST00000495530 MRAP2Q96G30 205 aa10.34□□□□□ -0.75
PTPRE-211ENST00000495530 PPP1R17O96001 155 aa10.33□□□□□ -0.76
PTPRE-211ENST00000495530 NANOS2P60321 138 aaKnown RBP10.33□□□□□ -0.76
PTPRE-211ENST00000495530 FABP9Q0Z7S8 132 aa10.33□□□□□ -0.76
PTPRE-211ENST00000495530 FHL2Q14192 279 aa10.33□□□□□ -0.76
PTPRE-211ENST00000495530 ZFAND6Q6FIF0 208 aa10.33□□□□□ -0.76
PTPRE-211ENST00000495530 EDA2RQ9HAV5 297 aa10.33□□□□□ -0.76
PTPRE-211ENST00000495530 PRO0255Q9UI72 69 aa10.33□□□□□ -0.76
PTPRE-211ENST00000495530 HHLA3Q9XRX5 114 aa10.33□□□□□ -0.76
PTPRE-211ENST00000495530 TRBV6-4A0A1B0GX49 114 aa10.32□□□□□ -0.76
PTPRE-211ENST00000495530 F5H768 121 aa10.32□□□□□ -0.76
PTPRE-211ENST00000495530 GATA1P15976 413 aaPredicted RBP10.32□□□□□ -0.76
PTPRE-211ENST00000495530 CKS2P33552 79 aa10.32□□□□□ -0.76
PTPRE-211ENST00000495530 MRPL51Q4U2R6 128 aaKnown RBP10.32□□□□□ -0.76
PTPRE-211ENST00000495530 Q6ZTC4 211 aa10.32□□□□□ -0.76
PTPRE-211ENST00000495530 RNF185Q96GF1 192 aa10.32□□□□□ -0.76
PTPRE-211ENST00000495530 PRADC1Q9BSG0 188 aa10.32□□□□□ -0.76
PTPRE-211ENST00000495530 MRPL18Q9H0U6 180 aaKnown RBP10.32□□□□□ -0.76
PTPRE-211ENST00000495530 DEFB131BA0A096LNP1 70 aa10.31□□□□□ -0.76
PTPRE-211ENST00000495530 TRAV10A0A0B4J240 114 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms