RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	DOPEY2	Q9Y3R5	2298 aa		10.08	□□□□□ -0.8
SUPT20H-222	ENST00000495071		H3BUA1	57 aa		10.08	□□□□□ -0.8
SUPT20H-222	ENST00000495071	GNLY	P22749	145 aa		10.08	□□□□□ -0.8
SUPT20H-222	ENST00000495071	DLX4	Q92988	240 aa	Predicted RBP	10.08	□□□□□ -0.8
SUPT20H-222	ENST00000495071	CCL19	Q99731	98 aa		10.08	□□□□□ -0.8
SUPT20H-222	ENST00000495071	SORL1	Q92673	2214 aa		10.08	□□□□□ -0.8
SUPT20H-222	ENST00000495071	LINC01619	G3V211	115 aa		10.08	□□□□□ -0.8
SUPT20H-222	ENST00000495071	ATP5J2	P56134	94 aa		10.08	□□□□□ -0.8
SUPT20H-222	ENST00000495071	MORN3	Q6PF18	240 aa	Predicted RBP	10.08	□□□□□ -0.8
SUPT20H-222	ENST00000495071	TGFA	P01135	160 aa		10.07	□□□□□ -0.8
SUPT20H-222	ENST00000495071	NDUFS8	O00217	210 aa		10.07	□□□□□ -0.8
SUPT20H-222	ENST00000495071	SCGB1C2	P0DMR2	95 aa		10.07	□□□□□ -0.8
SUPT20H-222	ENST00000495071	LGALS3	P17931	250 aa	Known RBP	10.06	□□□□□ -0.8
SUPT20H-222	ENST00000495071	FAM19A4	Q96LR4	140 aa		10.06	□□□□□ -0.8
SUPT20H-222	ENST00000495071	CRYGD	P07320	174 aa		10.06	□□□□□ -0.8
SUPT20H-222	ENST00000495071	SYT8	Q8NBV8	401 aa		10.06	□□□□□ -0.8
SUPT20H-222	ENST00000495071	TRBV7-9	A0A0J9YWB2	115 aa		10.06	□□□□□ -0.8
SUPT20H-222	ENST00000495071		A6NDX4	124 aa		10.06	□□□□□ -0.8
SUPT20H-222	ENST00000495071	INSL3	P51460	131 aa		10.06	□□□□□ -0.8
SUPT20H-222	ENST00000495071	HTN1	P15515	57 aa		10.05	□□□□□ -0.8
SUPT20H-222	ENST00000495071	LYRM7	Q5U5X0	104 aa		10.05	□□□□□ -0.8
SUPT20H-222	ENST00000495071	TMEM141	Q96I45	108 aa		10.05	□□□□□ -0.8
SUPT20H-222	ENST00000495071	MUC4	Q99102	2169 aa		10.05	□□□□□ -0.8
SUPT20H-222	ENST00000495071	ABCA2	Q9BZC7	2435 aa		10.05	□□□□□ -0.8
SUPT20H-222	ENST00000495071	KLLN	B2CW77	178 aa		10.05	□□□□□ -0.8
SUPT20H-222	ENST00000495071	TSHB	P01222	138 aa		10.05	□□□□□ -0.8
SUPT20H-222	ENST00000495071	KIF25-AS1	Q9Y6Z4	181 aa		10.05	□□□□□ -0.8
SUPT20H-222	ENST00000495071	IGHV3-64	A0A075B6Q5	118 aa		10.05	□□□□□ -0.8
SUPT20H-222	ENST00000495071	IGHV4OR15-8	A0A075B7B6	117 aa		10.05	□□□□□ -0.8
SUPT20H-222	ENST00000495071		A0A087WW49	117 aa		10.05	□□□□□ -0.8
SUPT20H-222	ENST00000495071	POLR2K	P53803	58 aa	Known RBP	10.05	□□□□□ -0.8
SUPT20H-222	ENST00000495071	LINC00315	P59091	139 aa		10.05	□□□□□ -0.8
SUPT20H-222	ENST00000495071	SNRPD3	P62318	126 aa	Known RBP	10.05	□□□□□ -0.8
SUPT20H-222	ENST00000495071	IGLV4-69	A0A075B6H9	119 aa		10.04	□□□□□ -0.8
SUPT20H-222	ENST00000495071	IGIP	A6NJ69	53 aa		10.04	□□□□□ -0.8
SUPT20H-222	ENST00000495071	APRG1	Q8IVJ8	170 aa		10.04	□□□□□ -0.8
SUPT20H-222	ENST00000495071	MDFIC	Q9P1T7	246 aa		10.04	□□□□□ -0.8
SUPT20H-222	ENST00000495071	TSPAN13	O95857	204 aa		10.04	□□□□□ -0.8
SUPT20H-222	ENST00000495071	COX6B1	P14854	86 aa		10.04	□□□□□ -0.8
SUPT20H-222	ENST00000495071	SPINK13	Q1W4C9	94 aa		10.04	□□□□□ -0.8
SUPT20H-222	ENST00000495071		A0A0J9YY99	117 aa		10.03	□□□□□ -0.8
SUPT20H-222	ENST00000495071	MSMB	P08118	114 aa		10.03	□□□□□ -0.8
SUPT20H-222	ENST00000495071	OPRPN	Q99935	248 aa	Predicted RBP	10.03	□□□□□ -0.8
SUPT20H-222	ENST00000495071	IGHV4-30-2	A0A087WSY4	118 aa		10.03	□□□□□ -0.8
SUPT20H-222	ENST00000495071		H7C2G1	150 aa		10.03	□□□□□ -0.8
SUPT20H-222	ENST00000495071	NXPH4	O95158	308 aa		10.03	□□□□□ -0.8
SUPT20H-222	ENST00000495071	C10orf105	Q8TEF2	133 aa		10.03	□□□□□ -0.8
SUPT20H-222	ENST00000495071	TIMM17A	Q99595	171 aa		10.03	□□□□□ -0.8
SUPT20H-222	ENST00000495071	CELSR1	Q9NYQ6	3014 aa		10.03	□□□□□ -0.8
SUPT20H-222	ENST00000495071		J3QQQ9	107 aa		10.02	□□□□□ -0.8
SUPT20H-222	ENST00000495071	DCANP1	Q8TF63	244 aa		10.02	□□□□□ -0.8
SUPT20H-222	ENST00000495071	PRO0461	Q9UI25	63 aa		10.02	□□□□□ -0.8
SUPT20H-222	ENST00000495071	UBE2D1	P51668	147 aa		10.02	□□□□□ -0.81
SUPT20H-222	ENST00000495071		Q8N1Y9	231 aa		10.02	□□□□□ -0.81
SUPT20H-222	ENST00000495071	IGLV1-40	P01703	118 aa		10.02	□□□□□ -0.81
SUPT20H-222	ENST00000495071	NDUFA11	Q86Y39	141 aa		10.02	□□□□□ -0.81
SUPT20H-222	ENST00000495071	TSPEAR-AS2	P59090	65 aa		10.01	□□□□□ -0.81
SUPT20H-222	ENST00000495071	ZNRF2	Q8NHG8	242 aa		10.01	□□□□□ -0.81
SUPT20H-222	ENST00000495071	DUX5	Q96PT3	197 aa		10.01	□□□□□ -0.81
SUPT20H-222	ENST00000495071	COL12A1	Q99715	3063 aa		10.01	□□□□□ -0.81
SUPT20H-222	ENST00000495071		K7EMT4	169 aa		10.01	□□□□□ -0.81
SUPT20H-222	ENST00000495071	RPL32	P62910	135 aa	Known RBP	10.01	□□□□□ -0.81
SUPT20H-222	ENST00000495071	ZNF876P	Q49A33	203 aa		10.01	□□□□□ -0.81
SUPT20H-222	ENST00000495071	C10orf99	Q6UWK7	81 aa		10.01	□□□□□ -0.81
SUPT20H-222	ENST00000495071	PTH2	Q96A98	100 aa		10.01	□□□□□ -0.81
SUPT20H-222	ENST00000495071	TRAV2	A0A0B4J234	112 aa		10	□□□□□ -0.81
SUPT20H-222	ENST00000495071	IGHV3-16	A0A0C4DH30	117 aa		10	□□□□□ -0.81
SUPT20H-222	ENST00000495071	TRBV27	A0A0K0K1C4	114 aa		10	□□□□□ -0.81
SUPT20H-222	ENST00000495071	C1QTNF4	Q9BXJ3	329 aa		10	□□□□□ -0.81
SUPT20H-222	ENST00000495071	IGHV1OR15-1	A0A075B7D0	117 aa		10	□□□□□ -0.81
SUPT20H-222	ENST00000495071	SYNJ2BP	P57105	145 aa		10	□□□□□ -0.81
SUPT20H-222	ENST00000495071	FOXI1	Q12951	378 aa		10	□□□□□ -0.81
SUPT20H-222	ENST00000495071	CFAP126	Q5VTH2	177 aa		10	□□□□□ -0.81
SUPT20H-222	ENST00000495071	POM121L12	Q8N7R1	296 aa		10	□□□□□ -0.81
SUPT20H-222	ENST00000495071	RAX2	Q96IS3	184 aa		10	□□□□□ -0.81
SUPT20H-222	ENST00000495071	IGHV3-73	A0A0B4J1V6	119 aa		10	□□□□□ -0.81
SUPT20H-222	ENST00000495071		Q1RN00	199 aa		10	□□□□□ -0.81
SUPT20H-222	ENST00000495071	TRPT1	Q86TN4	253 aa	Known RBP	10	□□□□□ -0.81
SUPT20H-222	ENST00000495071	VCX2	Q9H322	139 aa		10	□□□□□ -0.81
SUPT20H-222	ENST00000495071	LGALS9	O00182	355 aa		9.99	□□□□□ -0.81
SUPT20H-222	ENST00000495071	BRI3	O95415	125 aa		9.99	□□□□□ -0.81
SUPT20H-222	ENST00000495071	IGHV4-59	P01825	116 aa		9.99	□□□□□ -0.81
SUPT20H-222	ENST00000495071	SPATA25	Q9BR10	227 aa		9.99	□□□□□ -0.81
SUPT20H-222	ENST00000495071		A0A0J9YX75	114 aa		9.98	□□□□□ -0.81
SUPT20H-222	ENST00000495071		M0QY20	66 aa		9.98	□□□□□ -0.81
SUPT20H-222	ENST00000495071	SLC25A29	Q8N8R3	303 aa		9.98	□□□□□ -0.81
SUPT20H-222	ENST00000495071	PRO1854	Q9UHT4	67 aa		9.98	□□□□□ -0.81
SUPT20H-222	ENST00000495071	CFC1B	P0CG36	223 aa		9.98	□□□□□ -0.81
SUPT20H-222	ENST00000495071	CFC1	P0CG37	223 aa		9.98	□□□□□ -0.81
SUPT20H-222	ENST00000495071	AVP	P01185	164 aa		9.98	□□□□□ -0.81
SUPT20H-222	ENST00000495071	IGHV3-30	P01768	117 aa		9.98	□□□□□ -0.81
SUPT20H-222	ENST00000495071	IGHV3-30-5	P0DP03	117 aa		9.98	□□□□□ -0.81
SUPT20H-222	ENST00000495071	SCGB1A1	P11684	91 aa		9.98	□□□□□ -0.81
SUPT20H-222	ENST00000495071	C10orf126	Q8N4M7	172 aa		9.98	□□□□□ -0.81
SUPT20H-222	ENST00000495071	TCL1B	O95988	128 aa		9.97	□□□□□ -0.81
SUPT20H-222	ENST00000495071	USP9Y	O00507	2555 aa	Predicted RBP	9.97	□□□□□ -0.81
SUPT20H-222	ENST00000495071	TRBV6-5	A0A0K0K1A5	114 aa		9.97	□□□□□ -0.81
SUPT20H-222	ENST00000495071		A8MWV9	139 aa		9.97	□□□□□ -0.81
SUPT20H-222	ENST00000495071		B4DSR2	109 aa		9.97	□□□□□ -0.81
SUPT20H-222	ENST00000495071	C9orf85	Q96MD7	179 aa		9.97	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms