RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 ZFHX3Q15911 3703 aa7.61□□□□□ -1.19
LINC00488-201ENST00000494582 NDUFA7O95182 113 aa7.61□□□□□ -1.19
LINC00488-201ENST00000494582 LINC00315P59091 139 aa7.61□□□□□ -1.19
LINC00488-201ENST00000494582 HERVK_113P63121 156 aa7.61□□□□□ -1.19
LINC00488-201ENST00000494582 JPT2Q9H910 190 aa7.61□□□□□ -1.19
LINC00488-201ENST00000494582 C5orf47Q569G3 176 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 DEFB121Q5J5C9 76 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 PAPPA-AS1Q5QFB9 102 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 C9orf153Q5TBE3 101 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 C9orf47Q6ZRZ4 202 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 EEF1AKMT3Q96AZ1 226 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 C20orf173Q96LM9 149 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 LITAFQ99732 161 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 RNF5Q99942 180 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 ABCA4P78363 2273 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 NPFFO15130 113 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 GNRH2O43555 120 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 ZNF883P0CG24 379 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 ASCL5Q7RTU5 278 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 FAM19A5Q7Z5A7 132 aaPredicted RBP7.6□□□□□ -1.19
LINC00488-201ENST00000494582 METTL26Q96S19 204 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 ICOSQ9Y6W8 199 aa7.6□□□□□ -1.19
LINC00488-201ENST00000494582 IGHV1-69DA0A0B4J2H0 117 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 A0A0G2JNJ9 132 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 FAM240AA0A1B0GVK7 77 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 SMIM9A6NGZ8 99 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 C3orf22Q8N5N4 141 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 NPBQ8NG41 125 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 Q9UFV3 132 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 A0A0J9YXY3 114 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 LEPROTO15243 131 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 POLR2KP53803 58 aaKnown RBP7.59□□□□□ -1.19
LINC00488-201ENST00000494582 BSPH1Q075Z2 132 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 HES1Q14469 280 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 ADAMTSL4-AS1Q5T5F5 129 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 ZFAND2AQ8N6M9 145 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 CYSTM1Q9H1C7 97 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 PHLDA3Q9Y5J5 127 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 KIF25-AS1Q9Y6Z4 181 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 PCNX1Q96RV3 2341 aa7.59□□□□□ -1.19
LINC00488-201ENST00000494582 ASH1LQ9NR48 2969 aaKnown RBP7.59□□□□□ -1.2
LINC00488-201ENST00000494582 RNASE3P12724 160 aaKnown RBP7.58□□□□□ -1.2
LINC00488-201ENST00000494582 LY6DQ14210 128 aa7.58□□□□□ -1.2
LINC00488-201ENST00000494582 MAP1BP46821 2468 aaKnown RBP7.58□□□□□ -1.2
LINC00488-201ENST00000494582 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.58□□□□□ -1.2
LINC00488-201ENST00000494582 H3BT86 120 aa7.58□□□□□ -1.2
LINC00488-201ENST00000494582 S100A4P26447 101 aaKnown RBP7.58□□□□□ -1.2
LINC00488-201ENST00000494582 NPC2P61916 151 aa7.58□□□□□ -1.2
LINC00488-201ENST00000494582 TMEM101Q96IK0 257 aa7.58□□□□□ -1.2
LINC00488-201ENST00000494582 TIMM17AQ99595 171 aa7.58□□□□□ -1.2
LINC00488-201ENST00000494582 TMEM141Q96I45 108 aa7.57□□□□□ -1.2
LINC00488-201ENST00000494582 LINC00527Q9UJ94 153 aa7.57□□□□□ -1.2
LINC00488-201ENST00000494582 SUMO4Q6EEV6 95 aa7.57□□□□□ -1.2
LINC00488-201ENST00000494582 RNASE6Q93091 150 aaKnown RBP7.57□□□□□ -1.2
LINC00488-201ENST00000494582 BSNQ9UPA5 3926 aa7.57□□□□□ -1.2
LINC00488-201ENST00000494582 A0A0J9YXV3 536 aa7.56□□□□□ -1.2
LINC00488-201ENST00000494582 I3L3M4 83 aa7.56□□□□□ -1.2
LINC00488-201ENST00000494582 LST1O00453 97 aa7.56□□□□□ -1.2
LINC00488-201ENST00000494582 C15orf32Q32M92 178 aa7.56□□□□□ -1.2
LINC00488-201ENST00000494582 EDA2RQ9HAV5 297 aa7.56□□□□□ -1.2
LINC00488-201ENST00000494582 A0A087WWL8 130 aa7.56□□□□□ -1.2
LINC00488-201ENST00000494582 TRAV17A0A0B4J275 112 aa7.56□□□□□ -1.2
LINC00488-201ENST00000494582 LINC00526Q96FQ7 95 aa7.56□□□□□ -1.2
LINC00488-201ENST00000494582 TRAV8-3A0A0A6YYJ7 113 aa7.55□□□□□ -1.2
LINC00488-201ENST00000494582 PRSS2P07478 247 aa7.55□□□□□ -1.2
LINC00488-201ENST00000494582 CCDC140Q96MF4 163 aa7.55□□□□□ -1.2
LINC00488-201ENST00000494582 IGHV4OR15-8A0A075B7B6 117 aa7.55□□□□□ -1.2
LINC00488-201ENST00000494582 A0A087WW49 117 aa7.55□□□□□ -1.2
LINC00488-201ENST00000494582 SDHAF1A6NFY7 115 aa7.55□□□□□ -1.2
LINC00488-201ENST00000494582 IGFL2Q6UWQ7 119 aa7.55□□□□□ -1.2
LINC00488-201ENST00000494582 VMO1Q7Z5L0 202 aa7.55□□□□□ -1.2
LINC00488-201ENST00000494582 C2orf48Q96LS8 159 aa7.55□□□□□ -1.2
LINC00488-201ENST00000494582 PRRC2AP48634 2157 aaKnown RBP7.55□□□□□ -1.2
LINC00488-201ENST00000494582 IGHV7-81A0A0B4J1V7 117 aa7.54□□□□□ -1.2
LINC00488-201ENST00000494582 TRAV41A0A0B4J266 112 aa7.54□□□□□ -1.2
LINC00488-201ENST00000494582 A8MZ25 164 aa7.54□□□□□ -1.2
LINC00488-201ENST00000494582 UQCRQO14949 82 aa7.54□□□□□ -1.2
LINC00488-201ENST00000494582 RNASE4P34096 147 aaKnown RBP7.54□□□□□ -1.2
LINC00488-201ENST00000494582 CLEC19AQ6UXS0 136 aa7.54□□□□□ -1.2
LINC00488-201ENST00000494582 ITLN2Q8WWU7 325 aaPredicted RBP7.54□□□□□ -1.2
LINC00488-201ENST00000494582 MRPL53Q96EL3 112 aaKnown RBP7.54□□□□□ -1.2
LINC00488-201ENST00000494582 DUX5Q96PT3 197 aa7.54□□□□□ -1.2
LINC00488-201ENST00000494582 DPM3Q9P2X0 92 aa7.54□□□□□ -1.2
LINC00488-201ENST00000494582 ZNF256Q9Y2P7 627 aaPredicted RBP7.54□□□□□ -1.2
LINC00488-201ENST00000494582 F6UB75 175 aa7.54□□□□□ -1.2
LINC00488-201ENST00000494582 J3KT08 172 aa7.54□□□□□ -1.2
LINC00488-201ENST00000494582 CDX4O14627 284 aaPredicted RBP7.54□□□□□ -1.2
LINC00488-201ENST00000494582 LRRC75A-AS1Q8N1F1 130 aa7.54□□□□□ -1.2
LINC00488-201ENST00000494582 C16orf92Q96LL3 132 aa7.54□□□□□ -1.2
LINC00488-201ENST00000494582 A0A0J9YX75 114 aa7.53□□□□□ -1.2
LINC00488-201ENST00000494582 VCYO14598 125 aa7.53□□□□□ -1.2
LINC00488-201ENST00000494582 IGHV3-30-3P0DP02 117 aa7.53□□□□□ -1.2
LINC00488-201ENST00000494582 DCANP1Q8TF63 244 aa7.53□□□□□ -1.2
LINC00488-201ENST00000494582 DYNLRB1Q9NP97 96 aa7.53□□□□□ -1.2
LINC00488-201ENST00000494582 TRAV21A0A0B4J279 112 aa7.53□□□□□ -1.2
LINC00488-201ENST00000494582 SPXQ9BT56 116 aa7.53□□□□□ -1.2
LINC00488-201ENST00000494582 IMUPQ9GZP8 106 aa7.53□□□□□ -1.2
LINC00488-201ENST00000494582 PIEZO2Q9H5I5 2752 aa7.53□□□□□ -1.2
LINC00488-201ENST00000494582 CUL9Q8IWT3 2517 aa7.52□□□□□ -1.2
LINC00488-201ENST00000494582 E7EQL1 145 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms