RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 ESDP10768 282 aa9.32□□□□□ -0.92
ERCC3-209ENST00000494464 HTN3P15516 51 aa9.32□□□□□ -0.92
ERCC3-209ENST00000494464 S100A2P29034 98 aa9.32□□□□□ -0.92
ERCC3-209ENST00000494464 CAMPP49913 170 aa9.32□□□□□ -0.92
ERCC3-209ENST00000494464 SLAQ13239 276 aa9.32□□□□□ -0.92
ERCC3-209ENST00000494464 LINC00518Q8N0U6 118 aa9.32□□□□□ -0.92
ERCC3-209ENST00000494464 POM121L12Q8N7R1 296 aa9.32□□□□□ -0.92
ERCC3-209ENST00000494464 CNFNQ9BYD5 112 aa9.32□□□□□ -0.92
ERCC3-209ENST00000494464 TIMM8BQ9Y5J9 83 aaPredicted RBP9.32□□□□□ -0.92
ERCC3-209ENST00000494464 ARMS2P0C7Q2 107 aa9.31□□□□□ -0.92
ERCC3-209ENST00000494464 ZFAND2AQ8N6M9 145 aa9.31□□□□□ -0.92
ERCC3-209ENST00000494464 FER1L6-AS1Q8NA97 138 aa9.31□□□□□ -0.92
ERCC3-209ENST00000494464 KLLNB2CW77 178 aa9.3□□□□□ -0.92
ERCC3-209ENST00000494464 DEFB130BP0DP73 79 aa9.3□□□□□ -0.92
ERCC3-209ENST00000494464 DEFB130AP0DP74 79 aa9.3□□□□□ -0.92
ERCC3-209ENST00000494464 HTN1P15515 57 aa9.3□□□□□ -0.92
ERCC3-209ENST00000494464 C15orf53Q8NAA6 179 aa9.3□□□□□ -0.92
ERCC3-209ENST00000494464 HIST1H2BLQ99880 126 aa9.3□□□□□ -0.92
ERCC3-209ENST00000494464 TP53TG3Q9ULZ0 132 aa9.3□□□□□ -0.92
ERCC3-209ENST00000494464 TMSB15BA0A087X1C1 80 aa9.29□□□□□ -0.92
ERCC3-209ENST00000494464 TRAV12-3A0A0B4J271 114 aa9.29□□□□□ -0.92
ERCC3-209ENST00000494464 TRAV21A0A0B4J279 112 aa9.29□□□□□ -0.92
ERCC3-209ENST00000494464 IGKV3D-20A0A0C4DH25 116 aa9.29□□□□□ -0.92
ERCC3-209ENST00000494464 C7orf71A4D174 169 aa9.29□□□□□ -0.92
ERCC3-209ENST00000494464 GRIFINA4D1Z8 144 aa9.29□□□□□ -0.92
ERCC3-209ENST00000494464 CBY3A6NI87 242 aa9.29□□□□□ -0.92
ERCC3-209ENST00000494464 ORM1P02763 201 aa9.29□□□□□ -0.92
ERCC3-209ENST00000494464 ATP5G1P05496 136 aa9.29□□□□□ -0.92
ERCC3-209ENST00000494464 SRIP30626 198 aa9.29□□□□□ -0.92
ERCC3-209ENST00000494464 PDZD11Q5EBL8 140 aa9.29□□□□□ -0.92
ERCC3-209ENST00000494464 PRR9Q5T870 116 aa9.29□□□□□ -0.92
ERCC3-209ENST00000494464 LYZL1Q6UWQ5 148 aa9.29□□□□□ -0.92
ERCC3-209ENST00000494464 ZNF575Q86XF7 245 aa9.29□□□□□ -0.92
ERCC3-209ENST00000494464 LINC00612Q8N6U2 182 aa9.29□□□□□ -0.92
ERCC3-209ENST00000494464 F2Z2F3 143 aa9.28□□□□□ -0.92
ERCC3-209ENST00000494464 J3KRW8 73 aa9.28□□□□□ -0.92
ERCC3-209ENST00000494464 LINC00310P59036 64 aa9.28□□□□□ -0.92
ERCC3-209ENST00000494464 KIAA1644Q3SXP7 199 aa9.28□□□□□ -0.92
ERCC3-209ENST00000494464 TMEM18Q96B42 140 aa9.28□□□□□ -0.92
ERCC3-209ENST00000494464 PACRGQ96M98 296 aaPredicted RBP9.28□□□□□ -0.92
ERCC3-209ENST00000494464 LINC00467Q9BRT7 94 aa9.28□□□□□ -0.92
ERCC3-209ENST00000494464 ALKBH7Q9BT30 221 aaPredicted RBP9.28□□□□□ -0.92
ERCC3-209ENST00000494464 SSBP4Q9BWG4 385 aaPredicted RBP9.28□□□□□ -0.92
ERCC3-209ENST00000494464 NOP10Q9NPE3 64 aaKnown RBP9.28□□□□□ -0.92
ERCC3-209ENST00000494464 C11orf21Q9P2W6 132 aa9.28□□□□□ -0.92
ERCC3-209ENST00000494464 HECTD4Q9Y4D8 3996 aa9.28□□□□□ -0.92
ERCC3-209ENST00000494464 DNAH2Q9P225 4427 aa9.28□□□□□ -0.92
ERCC3-209ENST00000494464 FABP4P15090 132 aa9.27□□□□□ -0.93
ERCC3-209ENST00000494464 BAGE3Q86Y29 109 aa9.27□□□□□ -0.93
ERCC3-209ENST00000494464 C18orf32Q8TCD1 76 aa9.27□□□□□ -0.93
ERCC3-209ENST00000494464 TPPP3Q9BW30 176 aa9.27□□□□□ -0.93
ERCC3-209ENST00000494464 SNAI2O43623 268 aa9.26□□□□□ -0.93
ERCC3-209ENST00000494464 ZNF324O75467 553 aaPredicted RBP9.26□□□□□ -0.93
ERCC3-209ENST00000494464 SERF1AO75920 110 aa9.26□□□□□ -0.93
ERCC3-209ENST00000494464 OR5AL1P0C617 328 aa9.26□□□□□ -0.93
ERCC3-209ENST00000494464 MED14OSP0DP75 135 aa9.26□□□□□ -0.93
ERCC3-209ENST00000494464 DMRTA1Q5VZB9 504 aa9.26□□□□□ -0.93
ERCC3-209ENST00000494464 UBE2DNLQ8IWF7 75 aa9.26□□□□□ -0.93
ERCC3-209ENST00000494464 OR10D4PQ8NGN7 298 aa9.26□□□□□ -0.93
ERCC3-209ENST00000494464 C12orf57Q99622 126 aa9.26□□□□□ -0.93
ERCC3-209ENST00000494464 FAT2Q9NYQ8 4349 aa9.26□□□□□ -0.93
ERCC3-209ENST00000494464 F5H768 121 aa9.25□□□□□ -0.93
ERCC3-209ENST00000494464 GPX1P07203 203 aa9.25□□□□□ -0.93
ERCC3-209ENST00000494464 DAZ2Q13117 558 aaKnown RBP9.25□□□□□ -0.93
ERCC3-209ENST00000494464 DNLZQ5SXM8 178 aa9.25□□□□□ -0.93
ERCC3-209ENST00000494464 KCNS1Q96KK3 526 aa9.25□□□□□ -0.93
ERCC3-209ENST00000494464 NACAE9PAV3 2078 aa9.25□□□□□ -0.93
ERCC3-209ENST00000494464 CACNG7P62955 275 aa9.24□□□□□ -0.93
ERCC3-209ENST00000494464 LGALS9BQ3B8N2 356 aa9.24□□□□□ -0.93
ERCC3-209ENST00000494464 ANXA2RQ3ZCQ2 193 aa9.24□□□□□ -0.93
ERCC3-209ENST00000494464 C11orf72Q8NBR9 251 aa9.24□□□□□ -0.93
ERCC3-209ENST00000494464 TMEM191AQ9H0A3 160 aa9.24□□□□□ -0.93
ERCC3-209ENST00000494464 NUPR1O60356 82 aa9.24□□□□□ -0.93
ERCC3-209ENST00000494464 RNASE4P34096 147 aaKnown RBP9.24□□□□□ -0.93
ERCC3-209ENST00000494464 FAM104BQ5XKR9 115 aa9.24□□□□□ -0.93
ERCC3-209ENST00000494464 C18orf15Q96N68 181 aa9.24□□□□□ -0.93
ERCC3-209ENST00000494464 GAGE12BA1L429 117 aa9.23□□□□□ -0.93
ERCC3-209ENST00000494464 GAGE7O76087 117 aa9.23□□□□□ -0.93
ERCC3-209ENST00000494464 GAGE12FP0CL80 117 aa9.23□□□□□ -0.93
ERCC3-209ENST00000494464 GAGE12GP0CL81 117 aa9.23□□□□□ -0.93
ERCC3-209ENST00000494464 GAGE12IP0CL82 117 aa9.23□□□□□ -0.93
ERCC3-209ENST00000494464 ASIPP42127 132 aa9.23□□□□□ -0.93
ERCC3-209ENST00000494464 TWIST1Q15672 202 aa9.23□□□□□ -0.93
ERCC3-209ENST00000494464 PYY3Q5JQD4 70 aa9.23□□□□□ -0.93
ERCC3-209ENST00000494464 LINC00336Q6ZUF6 198 aa9.23□□□□□ -0.93
ERCC3-209ENST00000494464 DNAH17Q9UFH2 4485 aa9.22□□□□□ -0.93
ERCC3-209ENST00000494464 NTF3P20783 257 aa9.22□□□□□ -0.93
ERCC3-209ENST00000494464 IQCJQ1A5X6 159 aa9.22□□□□□ -0.93
ERCC3-209ENST00000494464 Q6ZR54 194 aa9.22□□□□□ -0.93
ERCC3-209ENST00000494464 SCRT2Q9NQ03 307 aa9.22□□□□□ -0.93
ERCC3-209ENST00000494464 GSN-AS1Q9NRJ2 163 aa9.22□□□□□ -0.93
ERCC3-209ENST00000494464 IGHV1OR15-1A0A075B7D0 117 aa9.21□□□□□ -0.94
ERCC3-209ENST00000494464 H3BNG1 76 aa9.21□□□□□ -0.94
ERCC3-209ENST00000494464 JOSD1Q15040 202 aaPredicted RBP9.21□□□□□ -0.94
ERCC3-209ENST00000494464 TDRG1Q3Y452 100 aa9.21□□□□□ -0.94
ERCC3-209ENST00000494464 Q6ZQT7 251 aa9.21□□□□□ -0.94
ERCC3-209ENST00000494464 Q6ZTI0 123 aa9.21□□□□□ -0.94
ERCC3-209ENST00000494464 CHCHD1Q96BP2 118 aaKnown RBP9.21□□□□□ -0.94
ERCC3-209ENST00000494464 SAMD10Q9BYL1 202 aa9.21□□□□□ -0.94
ERCC3-209ENST00000494464 NAGKQ9UJ70 344 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms