RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 WFDC12Q8WWY7 111 aa12.58□□□□□ -0.4
SYP-208ENST00000494396 CARD19Q96LW7 228 aa12.58□□□□□ -0.4
SYP-208ENST00000494396 RNF223E7ERA6 249 aa12.57□□□□□ -0.4
SYP-208ENST00000494396 RASL10AQ92737 203 aa12.57□□□□□ -0.4
SYP-208ENST00000494396 A0A0J9YY99 117 aa12.57□□□□□ -0.4
SYP-208ENST00000494396 J3QLI3 93 aa12.57□□□□□ -0.4
SYP-208ENST00000494396 TEX29Q8N6K0 151 aa12.57□□□□□ -0.4
SYP-208ENST00000494396 ANAPC13Q9BS18 74 aa12.57□□□□□ -0.4
SYP-208ENST00000494396 GAGE5Q13069 117 aa12.56□□□□□ -0.4
SYP-208ENST00000494396 GAGE6Q13070 117 aa12.56□□□□□ -0.4
SYP-208ENST00000494396 FHL3Q13643 280 aa12.56□□□□□ -0.4
SYP-208ENST00000494396 RNF182Q8N6D2 247 aa12.56□□□□□ -0.4
SYP-208ENST00000494396 LINC01600Q96MT4 127 aa12.56□□□□□ -0.4
SYP-208ENST00000494396 AVPP01185 164 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 SRD5A1P18405 259 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 ZFP2Q6ZN57 461 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 POM121L12Q8N7R1 296 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 SLC25A29Q8N8R3 303 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 MAPK1IP1LQ8NDC0 245 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 TMEM141Q96I45 108 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 METTL26Q96S19 204 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 MOB4Q9Y3A3 225 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 TRAV8-2A0A0B4J237 113 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 H3BVH4 76 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 ATP6V0E1O15342 81 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 TCL1BO95988 128 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 TGFAP01135 160 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 IGHV3-23P01764 117 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 SCGB1C2P0DMR2 95 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 TMEM219Q86XT9 240 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 C5orf56Q8N8D9 126 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 LINC00477Q96M19 166 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 PRO1854Q9UHT4 67 aa12.55□□□□□ -0.4
SYP-208ENST00000494396 TRAV21A0A0B4J279 112 aa12.54□□□□□ -0.4
SYP-208ENST00000494396 ECSCRQ19T08 205 aa12.54□□□□□ -0.4
SYP-208ENST00000494396 C9orf139Q6ZV77 190 aa12.54□□□□□ -0.4
SYP-208ENST00000494396 GLMPQ8WWB7 406 aa12.54□□□□□ -0.4
SYP-208ENST00000494396 C11orf86A6NJI1 115 aa12.53□□□□□ -0.4
SYP-208ENST00000494396 IGHV3-30P01768 117 aa12.53□□□□□ -0.4
SYP-208ENST00000494396 IGHV3-30-5P0DP03 117 aa12.53□□□□□ -0.4
SYP-208ENST00000494396 C15orf32Q32M92 178 aa12.53□□□□□ -0.4
SYP-208ENST00000494396 PLEKHB2Q96CS7 222 aa12.53□□□□□ -0.4
SYP-208ENST00000494396 CITED1Q99966 193 aa12.53□□□□□ -0.4
SYP-208ENST00000494396 U3KQE9 123 aa12.53□□□□□ -0.4
SYP-208ENST00000494396 CREBBPQ92793 2442 aa12.53□□□□□ -0.4
SYP-208ENST00000494396 CLPSL1A2RUU4 121 aa12.53□□□□□ -0.4
SYP-208ENST00000494396 PMVKQ15126 192 aa12.53□□□□□ -0.4
SYP-208ENST00000494396 Q6Q795 121 aa12.53□□□□□ -0.4
SYP-208ENST00000494396 RNF183Q96D59 192 aa12.53□□□□□ -0.4
SYP-208ENST00000494396 KLK15Q9H2R5 256 aa12.53□□□□□ -0.4
SYP-208ENST00000494396 TRBV7-1A0A0A6YYK4 115 aa12.52□□□□□ -0.4
SYP-208ENST00000494396 TRBV7-9A0A0J9YWB2 115 aa12.52□□□□□ -0.4
SYP-208ENST00000494396 Q96MF0 132 aa12.52□□□□□ -0.4
SYP-208ENST00000494396 TIMM17AQ99595 171 aa12.52□□□□□ -0.4
SYP-208ENST00000494396 CELSR1Q9NYQ6 3014 aa12.52□□□□□ -0.41
SYP-208ENST00000494396 IGHV4OR15-8A0A075B7B6 117 aa12.52□□□□□ -0.41
SYP-208ENST00000494396 A0A087WW49 117 aa12.52□□□□□ -0.41
SYP-208ENST00000494396 LINC01548A6NM66 108 aa12.52□□□□□ -0.41
SYP-208ENST00000494396 CFC1BP0CG36 223 aa12.52□□□□□ -0.41
SYP-208ENST00000494396 CFC1P0CG37 223 aa12.52□□□□□ -0.41
SYP-208ENST00000494396 IGHV4-31P0DP07 118 aa12.52□□□□□ -0.41
SYP-208ENST00000494396 ANKRD29Q8N6D5 301 aa12.52□□□□□ -0.41
SYP-208ENST00000494396 ZFHX3Q15911 3703 aa12.51□□□□□ -0.41
SYP-208ENST00000494396 H3BUX3 64 aa12.51□□□□□ -0.41
SYP-208ENST00000494396 P0DMU3 169 aa12.51□□□□□ -0.41
SYP-208ENST00000494396 FAM231AP0DMU4 169 aa12.51□□□□□ -0.41
SYP-208ENST00000494396 FAM231CP0DMU5 169 aa12.51□□□□□ -0.41
SYP-208ENST00000494396 HIST2H2BCQ6DN03 193 aa12.51□□□□□ -0.41
SYP-208ENST00000494396 PHLDA3Q9Y5J5 127 aa12.51□□□□□ -0.41
SYP-208ENST00000494396 IGLV4-69A0A075B6H9 119 aa12.5□□□□□ -0.41
SYP-208ENST00000494396 G3V318 75 aa12.5□□□□□ -0.41
SYP-208ENST00000494396 RHODO00212 210 aa12.5□□□□□ -0.41
SYP-208ENST00000494396 S100A4P26447 101 aaKnown RBP12.5□□□□□ -0.41
SYP-208ENST00000494396 PTH2Q96A98 100 aa12.5□□□□□ -0.41
SYP-208ENST00000494396 EEF1AKMT3Q96AZ1 226 aa12.5□□□□□ -0.41
SYP-208ENST00000494396 ZANQ9Y493 2812 aa12.5□□□□□ -0.41
SYP-208ENST00000494396 OVOL1O14753 267 aa12.5□□□□□ -0.41
SYP-208ENST00000494396 CRYGDP07320 174 aa12.5□□□□□ -0.41
SYP-208ENST00000494396 A0A0B4J2C4 111 aa12.49□□□□□ -0.41
SYP-208ENST00000494396 A6NDX4 124 aa12.49□□□□□ -0.41
SYP-208ENST00000494396 IGIPA6NJ69 53 aa12.49□□□□□ -0.41
SYP-208ENST00000494396 SLC25A20O43772 301 aa12.49□□□□□ -0.41
SYP-208ENST00000494396 NXPH4O95158 308 aa12.49□□□□□ -0.41
SYP-208ENST00000494396 LY6EQ16553 131 aa12.49□□□□□ -0.41
SYP-208ENST00000494396 KRTAP1-3Q8IUG1 177 aa12.49□□□□□ -0.41
SYP-208ENST00000494396 CSPG4Q6UVK1 2322 aa12.49□□□□□ -0.41
SYP-208ENST00000494396 SNCGO76070 127 aa12.48□□□□□ -0.41
SYP-208ENST00000494396 RPL39LQ96EH5 51 aaKnown RBP12.48□□□□□ -0.41
SYP-208ENST00000494396 C16orf92Q96LL3 132 aa12.48□□□□□ -0.41
SYP-208ENST00000494396 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.47□□□□□ -0.41
SYP-208ENST00000494396 GAGE2BQ13066 116 aa12.47□□□□□ -0.41
SYP-208ENST00000494396 GAGE2EQ4V326 116 aa12.47□□□□□ -0.41
SYP-208ENST00000494396 GPHB5Q86YW7 130 aa12.47□□□□□ -0.41
SYP-208ENST00000494396 APRG1Q8IVJ8 170 aa12.47□□□□□ -0.41
SYP-208ENST00000494396 C14orf178Q8N769 122 aaPredicted RBP12.47□□□□□ -0.41
SYP-208ENST00000494396 KLHL30-AS1Q8NEE0 82 aa12.47□□□□□ -0.41
SYP-208ENST00000494396 OR10J6PQ8NGY7 276 aa12.47□□□□□ -0.41
SYP-208ENST00000494396 GAGE2DQ9UEU5 116 aa12.47□□□□□ -0.41
SYP-208ENST00000494396 ZFAND2AQ8N6M9 145 aa12.47□□□□□ -0.41
SYP-208ENST00000494396 CCDC140Q96MF4 163 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms