RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 HIST1H2BMQ99879 126 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 DPH3P1Q9H4G8 78 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 U3KQK5 164 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 DNAH9Q9NYC9 4486 aa9.07□□□□□ -0.96
VPS52-220ENST00000493674 PRB2P02812 416 aaPredicted RBP9.06□□□□□ -0.96
VPS52-220ENST00000493674 CRYGDP07320 174 aa9.06□□□□□ -0.96
VPS52-220ENST00000493674 RAB4AP20338 218 aa9.06□□□□□ -0.96
VPS52-220ENST00000493674 RAB5BP61020 215 aa9.06□□□□□ -0.96
VPS52-220ENST00000493674 MRPL51Q4U2R6 128 aaKnown RBP9.06□□□□□ -0.96
VPS52-220ENST00000493674 UFSP1Q6NVU6 142 aa9.06□□□□□ -0.96
VPS52-220ENST00000493674 OR11H2Q8NH07 326 aa9.06□□□□□ -0.96
VPS52-220ENST00000493674 JPT2Q9H910 190 aa9.06□□□□□ -0.96
VPS52-220ENST00000493674 HUWE1Q7Z6Z7 4374 aaKnown RBP9.05□□□□□ -0.96
VPS52-220ENST00000493674 A8MWV9 139 aa9.05□□□□□ -0.96
VPS52-220ENST00000493674 RS1O15537 224 aa9.05□□□□□ -0.96
VPS52-220ENST00000493674 MIFP14174 115 aa9.05□□□□□ -0.96
VPS52-220ENST00000493674 KIAA1644Q3SXP7 199 aa9.05□□□□□ -0.96
VPS52-220ENST00000493674 SMIM15Q7Z3B0 74 aa9.05□□□□□ -0.96
VPS52-220ENST00000493674 C14orf178Q8N769 122 aaPredicted RBP9.05□□□□□ -0.96
VPS52-220ENST00000493674 MRAPQ8TCY5 172 aa9.05□□□□□ -0.96
VPS52-220ENST00000493674 ALKBH7Q9BT30 221 aaPredicted RBP9.05□□□□□ -0.96
VPS52-220ENST00000493674 MRPL16Q9NX20 251 aaKnown RBP9.05□□□□□ -0.96
VPS52-220ENST00000493674 COL7A1Q02388 2944 aa9.04□□□□□ -0.96
VPS52-220ENST00000493674 IGHV4-28A0A0C4DH34 117 aa9.04□□□□□ -0.96
VPS52-220ENST00000493674 S100A12P80511 92 aa9.04□□□□□ -0.96
VPS52-220ENST00000493674 CFAP126Q5VTH2 177 aa9.04□□□□□ -0.96
VPS52-220ENST00000493674 Q6ZTI0 123 aa9.04□□□□□ -0.96
VPS52-220ENST00000493674 LINC00518Q8N0U6 118 aa9.04□□□□□ -0.96
VPS52-220ENST00000493674 SAMD10Q9BYL1 202 aa9.04□□□□□ -0.96
VPS52-220ENST00000493674 EDA2RQ9HAV5 297 aa9.04□□□□□ -0.96
VPS52-220ENST00000493674 NOP10Q9NPE3 64 aaKnown RBP9.04□□□□□ -0.96
VPS52-220ENST00000493674 PPBPP02775 128 aa9.03□□□□□ -0.96
VPS52-220ENST00000493674 SRIP30626 198 aa9.03□□□□□ -0.96
VPS52-220ENST00000493674 COA6Q5JTJ3 125 aaKnown RBP9.03□□□□□ -0.96
VPS52-220ENST00000493674 MRAP2Q96G30 205 aa9.03□□□□□ -0.96
VPS52-220ENST00000493674 C18orf15Q96N68 181 aa9.03□□□□□ -0.96
VPS52-220ENST00000493674 TM2D3Q9BRN9 247 aa9.03□□□□□ -0.96
VPS52-220ENST00000493674 TRGV1A0A0A0MS02 117 aa9.02□□□□□ -0.97
VPS52-220ENST00000493674 TRAV4A0A0B4J268 109 aa9.02□□□□□ -0.97
VPS52-220ENST00000493674 D6R8Y8 96 aa9.02□□□□□ -0.97
VPS52-220ENST00000493674 Q0VG73 95 aa9.02□□□□□ -0.97
VPS52-220ENST00000493674 ZFP2Q6ZN57 461 aa9.02□□□□□ -0.97
VPS52-220ENST00000493674 SBSPONQ8IVN8 264 aa9.02□□□□□ -0.97
VPS52-220ENST00000493674 ORMDL3Q8N138 153 aa9.02□□□□□ -0.97
VPS52-220ENST00000493674 NRACQ8N912 160 aa9.02□□□□□ -0.97
VPS52-220ENST00000493674 C18orf32Q8TCD1 76 aa9.02□□□□□ -0.97
VPS52-220ENST00000493674 RETNQ9HD89 108 aa9.02□□□□□ -0.97
VPS52-220ENST00000493674 A0A087WWL8 130 aa9.01□□□□□ -0.97
VPS52-220ENST00000493674 LYRM9A8MSI8 78 aa9.01□□□□□ -0.97
VPS52-220ENST00000493674 RHODO00212 210 aa9.01□□□□□ -0.97
VPS52-220ENST00000493674 GAS8-AS1O95177 125 aa9.01□□□□□ -0.97
VPS52-220ENST00000493674 SMIM17P0DL12 118 aa9.01□□□□□ -0.97
VPS52-220ENST00000493674 OR10J3Q5JRS4 329 aa9.01□□□□□ -0.97
VPS52-220ENST00000493674 C11orf68Q9H3H3 251 aaKnown RBP9.01□□□□□ -0.97
VPS52-220ENST00000493674 LAMTOR2Q9Y2Q5 125 aa9.01□□□□□ -0.97
VPS52-220ENST00000493674 SMKR1H3BMG3 65 aa9□□□□□ -0.97
VPS52-220ENST00000493674 NCR2O95944 276 aa9□□□□□ -0.97
VPS52-220ENST00000493674 NPYP01303 97 aa9□□□□□ -0.97
VPS52-220ENST00000493674 CKS2P33552 79 aa9□□□□□ -0.97
VPS52-220ENST00000493674 LINC00310P59036 64 aa9□□□□□ -0.97
VPS52-220ENST00000493674 SUMO4Q6EEV6 95 aa9□□□□□ -0.97
VPS52-220ENST00000493674 PRELID3AQ96N28 172 aa9□□□□□ -0.97
VPS52-220ENST00000493674 DKK2Q9UBU2 259 aa9□□□□□ -0.97
VPS52-220ENST00000493674 TRAV26-2A0A0B4J265 109 aa8.99□□□□□ -0.97
VPS52-220ENST00000493674 PRSS47A8MTI9 375 aa8.99□□□□□ -0.97
VPS52-220ENST00000493674 CIDEAO60543 219 aa8.99□□□□□ -0.97
VPS52-220ENST00000493674 MGPP08493 103 aa8.99□□□□□ -0.97
VPS52-220ENST00000493674 GATA1P15976 413 aaPredicted RBP8.99□□□□□ -0.97
VPS52-220ENST00000493674 FAM74A4Q5TZK3 123 aa8.99□□□□□ -0.97
VPS52-220ENST00000493674 SPATA25Q9BR10 227 aa8.99□□□□□ -0.97
VPS52-220ENST00000493674 GAGE12BA1L429 117 aa8.98□□□□□ -0.97
VPS52-220ENST00000493674 M0QY20 66 aa8.98□□□□□ -0.97
VPS52-220ENST00000493674 GAGE7O76087 117 aa8.98□□□□□ -0.97
VPS52-220ENST00000493674 TNFRSF6BO95407 300 aa8.98□□□□□ -0.97
VPS52-220ENST00000493674 IGHV3-53P01767 116 aa8.98□□□□□ -0.97
VPS52-220ENST00000493674 GAGE12FP0CL80 117 aa8.98□□□□□ -0.97
VPS52-220ENST00000493674 GAGE12GP0CL81 117 aa8.98□□□□□ -0.97
VPS52-220ENST00000493674 GAGE12IP0CL82 117 aa8.98□□□□□ -0.97
VPS52-220ENST00000493674 EMP1P54849 157 aa8.98□□□□□ -0.97
VPS52-220ENST00000493674 FAM222AQ5U5X8 452 aa8.98□□□□□ -0.97
VPS52-220ENST00000493674 URB1-AS1Q96HZ7 61 aa8.98□□□□□ -0.97
VPS52-220ENST00000493674 ZNF479Q96JC4 524 aa8.98□□□□□ -0.97
VPS52-220ENST00000493674 B9D2Q9BPU9 175 aa8.98□□□□□ -0.97
VPS52-220ENST00000493674 CELA1Q9UNI1 258 aa8.98□□□□□ -0.97
VPS52-220ENST00000493674 TRBV6-5A0A0K0K1A5 114 aa8.97□□□□□ -0.97
VPS52-220ENST00000493674 C5orf52A6NGY3 159 aa8.97□□□□□ -0.97
VPS52-220ENST00000493674 ESDP10768 282 aa8.97□□□□□ -0.97
VPS52-220ENST00000493674 ZNF56Q15929 161 aa8.97□□□□□ -0.97
VPS52-220ENST00000493674 IQCJQ1A5X6 159 aa8.97□□□□□ -0.97
VPS52-220ENST00000493674 Q6ZSN1 163 aa8.97□□□□□ -0.97
VPS52-220ENST00000493674 OR4C5Q8NGB2 326 aa8.97□□□□□ -0.97
VPS52-220ENST00000493674 IGLV2-18A0A075B6J9 118 aa8.96□□□□□ -0.98
VPS52-220ENST00000493674 TEX48A0A1B0GUV7 120 aa8.96□□□□□ -0.98
VPS52-220ENST00000493674 LINC01546A6NGU7 62 aa8.96□□□□□ -0.98
VPS52-220ENST00000493674 DEFB4AO15263 64 aa8.96□□□□□ -0.98
VPS52-220ENST00000493674 PPP1R17O96001 155 aa8.96□□□□□ -0.98
VPS52-220ENST00000493674 RPL32P62910 135 aaKnown RBP8.96□□□□□ -0.98
VPS52-220ENST00000493674 DEFB121Q5J5C9 76 aa8.96□□□□□ -0.98
VPS52-220ENST00000493674 RPL39LQ96EH5 51 aaKnown RBP8.96□□□□□ -0.98
VPS52-220ENST00000493674 C20orf78Q9BR46 151 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms